Result of FASTA (ccds) for
pFN21AE4041
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4041, 263 aa
1>>>pF1KE4041 263 - 263 aa - 263 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2019+/-0.00104; mu= 10.7921+/- 0.062
mean_var=131.7093+/-28.101, 0's: 0 Z-trim(107.4): 154 B-trim: 5 in 1/49
Lambda= 0.111755
statistics sampled from 9397 (9579) to 9397 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.677), E-opt: 0.2 (0.294), width: 16
Scan time: 2.330
The best scores are: opt bits E(32554)
CCDS34515.1 RFPL4B gene_id:442247|Hs108|chr6 ( 263) 1831 306.6 1.2e-83
CCDS13857.2 RFPL1 gene_id:5988|Hs108|chr22 ( 317) 562 102.1 5.1e-22
CCDS13904.1 RFPL3 gene_id:10738|Hs108|chr22 ( 288) 543 99.0 4e-21
CCDS43011.1 RFPL3 gene_id:10738|Hs108|chr22 ( 317) 543 99.0 4.3e-21
CCDS46694.1 RFPL2 gene_id:10739|Hs108|chr22 ( 317) 543 99.0 4.3e-21
CCDS43009.2 RFPL2 gene_id:10739|Hs108|chr22 ( 378) 543 99.1 4.9e-21
CCDS46201.1 RFPL4A gene_id:342931|Hs108|chr19 ( 287) 508 93.3 2e-19
CCDS59425.1 RFPL4AL1 gene_id:729974|Hs108|chr19 ( 287) 504 92.7 3.1e-19
CCDS4654.1 TRIM27 gene_id:5987|Hs108|chr6 ( 513) 422 79.7 4.5e-15
CCDS4612.2 BTN3A3 gene_id:10384|Hs108|chr6 ( 535) 379 72.8 5.6e-13
CCDS4611.1 BTN3A3 gene_id:10384|Hs108|chr6 ( 584) 372 71.7 1.3e-12
CCDS34377.1 TRIM39 gene_id:56658|Hs108|chr6 ( 518) 371 71.5 1.3e-12
CCDS34378.1 TRIM39 gene_id:56658|Hs108|chr6 ( 488) 367 70.8 2e-12
CCDS31048.1 TRIM11 gene_id:81559|Hs108|chr1 ( 468) 366 70.6 2.2e-12
CCDS1636.1 TRIM58 gene_id:25893|Hs108|chr1 ( 486) 363 70.2 3.2e-12
CCDS4614.1 BTN1A1 gene_id:696|Hs108|chr6 ( 526) 362 70.0 3.7e-12
CCDS31356.1 TRIM68 gene_id:55128|Hs108|chr11 ( 485) 358 69.4 5.5e-12
CCDS3851.1 TRIML1 gene_id:339976|Hs108|chr4 ( 468) 349 67.9 1.5e-11
CCDS47388.1 BTN3A1 gene_id:11119|Hs108|chr6 ( 461) 348 67.7 1.6e-11
CCDS4608.1 BTN3A1 gene_id:11119|Hs108|chr6 ( 513) 348 67.8 1.7e-11
CCDS56405.1 BTN2A1 gene_id:11120|Hs108|chr6 ( 466) 347 67.6 1.8e-11
CCDS4613.1 BTN2A1 gene_id:11120|Hs108|chr6 ( 527) 347 67.6 2e-11
CCDS56403.1 BTN2A2 gene_id:10385|Hs108|chr6 ( 313) 338 65.9 3.8e-11
CCDS4607.1 BTN2A2 gene_id:10385|Hs108|chr6 ( 407) 338 66.1 4.6e-11
CCDS4606.1 BTN2A2 gene_id:10385|Hs108|chr6 ( 523) 338 66.2 5.4e-11
>>CCDS34515.1 RFPL4B gene_id:442247|Hs108|chr6 (263 aa)
initn: 1831 init1: 1831 opt: 1831 Z-score: 1615.5 bits: 306.6 E(32554): 1.2e-83
Smith-Waterman score: 1831; 100.0% identity (100.0% similar) in 263 aa overlap (1-263:1-263)
10 20 30 40 50 60
pF1KE4 MAKRLQAELSCPVCLDFFSCSISLSCTHVFCFDCIQRYILENHDFRAMCPLCRDVVKVPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MAKRLQAELSCPVCLDFFSCSISLSCTHVFCFDCIQRYILENHDFRAMCPLCRDVVKVPA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 LEEWQVSVLTLMTKQHNSRLEQSLHVREELRHFREDVTLDAATASSLLVFSNDLRSAQCK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 LEEWQVSVLTLMTKQHNSRLEQSLHVREELRHFREDVTLDAATASSLLVFSNDLRSAQCK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 KIHHDLTKDPRLACVLGTPCFSSGQHYWEVEVGEVKSWSLGVCKEPADRKSNDLFPEHGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 KIHHDLTKDPRLACVLGTPCFSSGQHYWEVEVGEVKSWSLGVCKEPADRKSNDLFPEHGF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 WISMKAGAIHANTHLERIPASPRLRRVGIFLDADLEEIQFFDVDNNVLIYTHDGFFSLEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 WISMKAGAIHANTHLERIPASPRLRRVGIFLDADLEEIQFFDVDNNVLIYTHDGFFSLEL
190 200 210 220 230 240
250 260
pF1KE4 LCPFFCLELLGEGESGNVLTICP
:::::::::::::::::::::::
CCDS34 LCPFFCLELLGEGESGNVLTICP
250 260
>>CCDS13857.2 RFPL1 gene_id:5988|Hs108|chr22 (317 aa)
initn: 566 init1: 176 opt: 562 Z-score: 508.7 bits: 102.1 E(32554): 5.1e-22
Smith-Waterman score: 562; 36.4% identity (64.7% similar) in 272 aa overlap (1-263:30-300)
10 20 30
pF1KE4 MAKRLQAELSCPVCLDFFSCSISLSCTHVFC
:: .: ::::: :.. .:: : . :
CCDS13 MKRLSLVTTNRLSPHGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE4 FDCIQRYILENHDFRAMCPLCRDVVKVPALEE-WQVSVLTLMTKQHNSRLEQSLHVREEL
: ::. : : .: : : . .. ::. :. :. . .:.. :.. ..
CCDS13 FKCINSLQKEPHGEDLLCCCCSMVSQKNKIRPSWQLERLASHIKELEPKLKKILQMNPRM
70 80 90 100 110 120
100 110 120 130 140
pF1KE4 RHFREDVTLDAATASSLLVFSNDLRSAQ--C-KKIHHDLTKDPRLA-CVLGTPCFSSGQH
:.:. :.:::: ::...:..:.::::.. : . ..::.. .. :.::.: :. :.:
CCDS13 RKFQVDMTLDADTANNFLLISDDLRSVRSGCITQNRQDLAERFDVSICILGSPRFTCGRH
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE4 YWEVEVGEVKSWSLGVCKEPADRKSN-DLFPEHGFW-ISMKAGA-IHANT-HLERIPASP
::::.:: :.::::.: . ::. : :.::: .:.. :. . :.: : . ..
CCDS13 YWEVDVGTSTEWDLGVCRESVHRKGRIHLTTERGFWTVSLRDGSRLSASTVPLTFLFVDR
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE4 RLRRVGIFLDADLEEIQFFDVDNNVLIYTHDGFFSLELLCPFFCLELLGEGESGNVLTIC
.:.::::::: .....:::.... .:: . . : : :: .:.. .::.::
CCDS13 KLQRVGIFLDMGMQNVSFFDAEGGSHVYTFRSVSAEEPLHLFFAPPSPPNGDK-SVLSIC
250 260 270 280 290
pF1KE4 P
:
CCDS13 PVINPGTTDAPVHPGEAK
300 310
>>CCDS13904.1 RFPL3 gene_id:10738|Hs108|chr22 (288 aa)
initn: 464 init1: 148 opt: 543 Z-score: 492.7 bits: 99.0 E(32554): 4e-21
Smith-Waterman score: 543; 35.7% identity (65.1% similar) in 272 aa overlap (1-263:1-271)
10 20 30 40 50 60
pF1KE4 MAKRLQAELSCPVCLDFFSCSISLSCTHVFCFDCIQRYILENHDFRAMCPLCRDVVKVPA
:: .: ::::: :.. .:: : . :. ::. : : .: : : .
CCDS13 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK
10 20 30 40 50 60
70 80 90 100 110
pF1KE4 LE-EWQVSVLTLMTKQHNSRLEQSLHVREELRHFREDVTLDAATASSLLVFSNDLRSAQC
.. . :. :. :. . .:.. :.. ..:.:. :.:::: ::...:..:.::::..
CCDS13 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 KKI---HHDLTKDPRLA-CVLGTPCFSSGQHYWEVEVGEVKSWSLGVCKEPADRKSN-DL
: ..::.. .. :.::.: :. :.:::::.:: :.::::.: . :.. .:
CCDS13 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 FPEHGFW-ISMKAGA-IHANT-HLERIPASPRLRRVGIFLDADLEEIQFFDVDNNVLIYT
: ::: .:.. :. . :.: : . .. .:.::::::: .....:::.... .::
CCDS13 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
190 200 210 220 230 240
240 250 260
pF1KE4 HDGFFSLELLCPFFCLELLGEGESGNVLTICP
. . : : ::. . .:..: ::.:::
CCDS13 FRSVSAEEPLRPFLAPSIPPNGDQG-VLSICPLMNSGTTDAPVRPGEAK
250 260 270 280
>>CCDS43011.1 RFPL3 gene_id:10738|Hs108|chr22 (317 aa)
initn: 464 init1: 148 opt: 543 Z-score: 492.2 bits: 99.0 E(32554): 4.3e-21
Smith-Waterman score: 543; 35.7% identity (65.1% similar) in 272 aa overlap (1-263:30-300)
10 20 30
pF1KE4 MAKRLQAELSCPVCLDFFSCSISLSCTHVFC
:: .: ::::: :.. .:: : . :
CCDS43 MKRLSLVTTNRLSPQGNFLPLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCTVC
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE4 FDCIQRYILENHDFRAMCPLCRDVVKVPALE-EWQVSVLTLMTKQHNSRLEQSLHVREEL
. ::. : : .: : : . .. . :. :. :. . .:.. :.. ..
CCDS43 LKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNRQLERLVSHIKELEPKLKKILQMNPRM
70 80 90 100 110 120
100 110 120 130 140
pF1KE4 RHFREDVTLDAATASSLLVFSNDLRSAQCKKI---HHDLTKDPRLA-CVLGTPCFSSGQH
:.:. :.:::: ::...:..:.::::.. : ..::.. .. :.::.: :. :.:
CCDS43 RKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRH
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE4 YWEVEVGEVKSWSLGVCKEPADRKSN-DLFPEHGFW-ISMKAGA-IHANT-HLERIPASP
::::.:: :.::::.: . :.. .: : ::: .:.. :. . :.: : . ..
CCDS43 YWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDR
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE4 RLRRVGIFLDADLEEIQFFDVDNNVLIYTHDGFFSLELLCPFFCLELLGEGESGNVLTIC
.:.::::::: .....:::.... .:: . . : : ::. . .:..: ::.::
CCDS43 KLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGDQG-VLSIC
250 260 270 280 290
pF1KE4 P
:
CCDS43 PLMNSGTTDAPVRPGEAK
300 310
>>CCDS46694.1 RFPL2 gene_id:10739|Hs108|chr22 (317 aa)
initn: 483 init1: 165 opt: 543 Z-score: 492.2 bits: 99.0 E(32554): 4.3e-21
Smith-Waterman score: 543; 35.9% identity (65.2% similar) in 273 aa overlap (1-263:30-300)
10 20 30
pF1KE4 MAKRLQAELSCPVCLDFFSCSISLSCTHVFC
:: .: ::::: :.. .:: : . :
CCDS46 MKRLSLVTTNRLSPHGNFFTLCTFPLAVDMAALFQEASSCPVCSDYLEKPMSLECGCAVC
10 20 30 40 50 60
40 50 60 70 80
pF1KE4 FDCIQRYILENHDFRAMCPLCRDVV--KVPALEEWQVSVLTLMTKQHNSRLEQSLHVREE
. ::. : : .: : ..: : .. :. :. :. . .:.. :.. .
CCDS46 LKCINSLQKEPHGEDLLC-CCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPR
70 80 90 100 110
90 100 110 120 130 140
pF1KE4 LRHFREDVTLDAATASSLLVFSNDLRSAQCKKIHH---DLTKDPRLA-CVLGTPCFSSGQ
.:.:. :.:::: ::...:..:.::::.. .:.. ::.. .. :.::.: :. :.
CCDS46 MRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGR
120 130 140 150 160 170
150 160 170 180 190 200
pF1KE4 HYWEVEVGEVKSWSLGVCKEPADRKSN-DLFPEHGFW-ISMKAGA-IHANT-HLERIPAS
: :::.:: :.::::.: . ::. .: : ::: .:.. :. . :.: : . ..
CCDS46 HCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVD
180 190 200 210 220 230
210 220 230 240 250 260
pF1KE4 PRLRRVGIFLDADLEEIQFFDVDNNVLIYTHDGFFSLELLCPFFCLELLGEGESGNVLTI
.:.::::::: .....:::.... .:: . . : : ::. . .:..: ::.:
CCDS46 RKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQG-VLSI
240 250 260 270 280 290
pF1KE4 CP
::
CCDS46 CPLMNSGTTDAPVRPGEAK
300 310
>>CCDS43009.2 RFPL2 gene_id:10739|Hs108|chr22 (378 aa)
initn: 483 init1: 165 opt: 543 Z-score: 491.2 bits: 99.1 E(32554): 4.9e-21
Smith-Waterman score: 543; 35.9% identity (65.2% similar) in 273 aa overlap (1-263:91-361)
10 20 30
pF1KE4 MAKRLQAELSCPVCLDFFSCSISLSCTHVF
:: .: ::::: :.. .:: : .
CCDS43 KRPSCAPSPQDLSAQWKQLEDRGASSRRVDMAALFQEASSCPVCSDYLEKPMSLECGCAV
70 80 90 100 110 120
40 50 60 70 80
pF1KE4 CFDCIQRYILENHDFRAMCPLCRDVV--KVPALEEWQVSVLTLMTKQHNSRLEQSLHVRE
:. ::. : : .: : ..: : .. :. :. :. . .:.. :..
CCDS43 CLKCINSLQKEPHGEDLLC-CCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNP
130 140 150 160 170
90 100 110 120 130 140
pF1KE4 ELRHFREDVTLDAATASSLLVFSNDLRSAQCKKIHH---DLTKDPRLA-CVLGTPCFSSG
..:.:. :.:::: ::...:..:.::::.. .:.. ::.. .. :.::.: :. :
CCDS43 RMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCG
180 190 200 210 220 230
150 160 170 180 190 200
pF1KE4 QHYWEVEVGEVKSWSLGVCKEPADRKSN-DLFPEHGFW-ISMKAGA-IHANT-HLERIPA
.: :::.:: :.::::.: . ::. .: : ::: .:.. :. . :.: : . .
CCDS43 RHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFV
240 250 260 270 280 290
210 220 230 240 250 260
pF1KE4 SPRLRRVGIFLDADLEEIQFFDVDNNVLIYTHDGFFSLELLCPFFCLELLGEGESGNVLT
. .:.::::::: .....:::.... .:: . . : : ::. . .:..: ::.
CCDS43 DRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQG-VLS
300 310 320 330 340 350
pF1KE4 ICP
:::
CCDS43 ICPLMNSGTTDAPVRPGEAK
360 370
>>CCDS46201.1 RFPL4A gene_id:342931|Hs108|chr19 (287 aa)
initn: 442 init1: 186 opt: 508 Z-score: 462.2 bits: 93.3 E(32554): 2e-19
Smith-Waterman score: 508; 32.4% identity (64.7% similar) in 272 aa overlap (1-262:1-270)
10 20 30 40 50 60
pF1KE4 MAKRLQAELSCPVCLDFFSCSISLSCTHVFCFDCIQRYILENHDFRAMCPLCRDVVKVPA
::.... . ::::: . ...:.: .. :..:.. : .: .: : .
CCDS46 MAEHFKQIIRCPVCLKDLEEAVQLKCGYACCLQCLNSLQKEPDGEGLLCRFCSVVSQKDD
10 20 30 40 50 60
70 80 90 100 110
pF1KE4 LE-EWQVSVLTLMTKQHNSRLEQSLHVREELRHFREDVTLDAATASSLLVFSNDLRSAQC
.. .... .:. . :. . .:.. : . ..:.:. :.:.:. ::.. :..:.:::: .
CCDS46 IKPKYKLRALVSIIKELEPKLKSVLTMNPRMRKFQVDMTFDVDTANNYLIISEDLRSFRS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 KKIHHDLTK-----DPRLACVLGTPCFSSGQHYWEVEVGEVKSWSLGVCKEPADRKSNDL
. .. . : : :::::: :.::.:::::.:: . :..::::: ..:... .
CCDS46 GDLSQNRKEQAERFDTAL-CVLGTPRFTSGRHYWEVDVGTSQVWDVGVCKESVNRQGKIV
130 140 150 160 170
180 190 200 210 220 230
pF1KE4 FP-EHGFW-ISMKAGAIHANTHLERIP--ASPRLRRVGIFLDADLEEIQFFDVDNNVLIY
. :::: .. . : . : . . : .::.:.:::::::. .. : :..:... ::
CCDS46 LSSEHGFLTVGCREGKVFAASTVPMTPLWVSPQLHRVGIFLDVGMRSIAFYNVSDGCHIY
180 190 200 210 220 230
240 250 260
pF1KE4 THDGFFSLELLCPFFCLELLGEGESGNVLTICP
: . : ::: . : .. ..:.::
CCDS46 TFIEIPVCEPWRPFFAHKR-GSQDDQSILSICSVINPSAASAPVSSEGK
240 250 260 270 280
>>CCDS59425.1 RFPL4AL1 gene_id:729974|Hs108|chr19 (287 aa)
initn: 434 init1: 186 opt: 504 Z-score: 458.7 bits: 92.7 E(32554): 3.1e-19
Smith-Waterman score: 504; 32.4% identity (64.3% similar) in 272 aa overlap (1-262:1-270)
10 20 30 40 50 60
pF1KE4 MAKRLQAELSCPVCLDFFSCSISLSCTHVFCFDCIQRYILENHDFRAMCPLCRDVVKVPA
::.... . ::::: . ...:.: .. :..:.. : .: .: : .
CCDS59 MAEHFKQIIRCPVCLKDLEEAVQLKCGYACCLQCLNSLQKEPDGEGLLCRFCSVVSQKDD
10 20 30 40 50 60
70 80 90 100 110
pF1KE4 LE-EWQVSVLTLMTKQHNSRLEQSLHVREELRHFREDVTLDAATASSLLVFSNDLRSAQC
.. .... .:. . :. . .:.. : . ..:.:. :.:.:. ::.. :..:.:::: .
CCDS59 IKPKYKLRALVSIIKELEPKLKSVLTMNPRMRKFQVDMTFDVDTANNYLIISEDLRSFRS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 KKIHHDLTK-----DPRLACVLGTPCFSSGQHYWEVEVGEVKSWSLGVCKEPADRKSN-D
. .. . : : :::::: :.::.:::::.:: . :..::::: ..:... .
CCDS59 GDLSQNRKEQAERFDTAL-CVLGTPRFTSGRHYWEVDVGTSQVWDVGVCKESVNRQGKIE
130 140 150 160 170
180 190 200 210 220 230
pF1KE4 LFPEHGFW-ISMKAGAIHANTHLERIP--ASPRLRRVGIFLDADLEEIQFFDVDNNVLIY
: :::: .. . : . : . . : .::.:.:::::::. .. : :..:... :
CCDS59 LSSEHGFLTVGCREGKVFAASTVPMTPLWVSPQLHRVGIFLDVGMRSIAFYNVSDGCHIN
180 190 200 210 220 230
240 250 260
pF1KE4 THDGFFSLELLCPFFCLELLGEGESGNVLTICP
: . : ::: . : .. ..:.::
CCDS59 TFIEIPVCEPWRPFFAHKR-GSQDDQSILSICSVINPSTASAPVSSEGK
240 250 260 270 280
>>CCDS4654.1 TRIM27 gene_id:5987|Hs108|chr6 (513 aa)
initn: 474 init1: 188 opt: 422 Z-score: 384.1 bits: 79.7 E(32554): 4.5e-15
Smith-Waterman score: 422; 36.2% identity (63.3% similar) in 210 aa overlap (69-263:287-491)
40 50 60 70 80 90
pF1KE4 ILENHDFRAMCPLCRDVVKVPALEEWQVSVLTLMTKQHNSRLEQSLHVREELRH---FRE
:: :: . ....... .:::. .
CCDS46 RAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQSDMEKIQELREAQLYSV
260 270 280 290 300 310
100 110 120 130 140 150
pF1KE4 DVTLDAATASSLLVFSNDLRSAQCKKIHHDLTKDPR----LACVLGTPCFSSGQHYWEVE
::::: :: :..:..::... . ...:: .:. . ::::.::: .:.::::::
CCDS46 DVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCVLGSPCFIAGRHYWEVE
320 330 340 350 360 370
160 170 180 190 200
pF1KE4 VGEVKSWSLGVCKEPADRKSN-DLFPEHGFW-ISMKAGAIH--ANTHLERIPASPRLRRV
::. .:..:::.. . ::.. :..::: .:. : . .. . .: :.::
CCDS46 VGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWALTSPMTALPLRTPLQRV
380 390 400 410 420 430
210 220 230 240 250 260
pF1KE4 GIFLDADLEEIQFFDVDNNVLIYTHDGFFSLELLC----PFFCLELLGEGESGNVLTICP
::::: : :..:..: . .: :: .: :.: : : :.:. : :::
CCDS46 GIFLDYDAGEVSFYNVTERCHTFT----FSHATFCGPVRPYFSLSYSG-GKSAAPLIICP
440 450 460 470 480 490
CCDS46 MSGIDGFSGHVGNHGHSMETSP
500 510
>>CCDS4612.2 BTN3A3 gene_id:10384|Hs108|chr6 (535 aa)
initn: 338 init1: 174 opt: 379 Z-score: 346.4 bits: 72.8 E(32554): 5.6e-13
Smith-Waterman score: 379; 37.3% identity (60.9% similar) in 220 aa overlap (60-263:254-464)
30 40 50 60 70 80
pF1KE4 FCFDCIQRYILENHDFRAMCPLCRDVVKVPALEEWQVSVLTLMTKQHNSRLEQSLHVRE-
: : ..:. :. .: :.:: .:
CCDS46 ASYFLWRQQKEKIALSRETEREREMKEMGYAATEQEISLREWRKIQYMARGEKSLAYHEW
230 240 250 260 270 280
90 100 110 120 130 140
pF1KE4 ELRHFRE-DVTLDAATASSLLVFSNDLRSAQCKKIHHDLTKDP-RLA---CVLGTPCFSS
.. :. :: :: ::...:. :.: ::.: . .:: .: :. :::: :.:
CCDS46 KMALFKPADVILDPDTANAILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTS
290 300 310 320 330 340
150 160 170 180 190
pF1KE4 GQHYWEVEVGEVKSWSLGVCKEPADRKSN--DLFPEHGFW-ISMKAGAIH-----ANTHL
:.::::::::. : : .:::.. ..::.. . ::.:.: ... : . :.:
CCDS46 GRHYWEVEVGDRKEWHIGVCSKNVERKKGWVKMTPENGYWTMGLTDGNKYRALTEPRTNL
350 360 370 380 390 400
200 210 220 230 240 250
pF1KE4 ERIPASPRLRRVGIFLDADLEEIQFFDVDNNVLIYT--HDGFFSLELLCPFFCLELLGEG
..: :: .:::::: . ::.:... .. ::: : .: : : : : . :
CCDS46 -KLPEPPR--KVGIFLDYETGEISFYNATDGSHIYTFPHASF--SEPLYPVFRILTL---
410 420 430 440 450
260
pF1KE4 ESGNVLTICP
..:::::
CCDS46 -EPTALTICPIPKEVESSPDPDLVPDHSLETPLTPGLANESGEPQAEVTSLLLPAHPGAE
460 470 480 490 500 510
263 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 03:36:15 2016 done: Sun Nov 6 03:36:15 2016
Total Scan time: 2.330 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]