Result of FASTA (omim) for
pFN21AE4033
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4033, 242 aa
1>>>pF1KE4033 242 - 242 aa - 242 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6268+/-0.000357; mu= 13.5350+/- 0.022
mean_var=87.4265+/-17.223, 0's: 0 Z-trim(115.6): 360 B-trim: 0 in 0/57
Lambda= 0.137168
statistics sampled from 25763 (26160) to 25763 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.307), width: 16
Scan time: 6.160
The best scores are: opt bits E(85289)
NP_996563 (OMIM: 612403) ras-like protein family m ( 242) 1598 325.8 4.2e-89
NP_001318055 (OMIM: 612403) ras-like protein famil ( 200) 1327 272.1 5e-73
NP_076429 (OMIM: 612404) ras-like protein family m ( 248) 797 167.3 2.2e-41
NP_116307 (OMIM: 612664) ras-related and estrogen- ( 199) 426 93.8 2.3e-19
XP_016875610 (OMIM: 612664) PREDICTED: ras-related ( 196) 367 82.1 7.6e-16
NP_008843 (OMIM: 609591,615355) GTP-binding protei ( 219) 362 81.2 1.6e-15
NP_001243750 (OMIM: 609591,615355) GTP-binding pro ( 236) 362 81.2 1.7e-15
NP_066361 (OMIM: 179540) ras-related protein Rap-2 ( 183) 318 72.4 6e-13
NP_036382 (OMIM: 600098) ras-related protein R-Ras ( 204) 316 72.1 8.5e-13
NP_005393 (OMIM: 179550) ras-related protein Ral-A ( 206) 315 71.9 9.9e-13
XP_011513768 (OMIM: 179550) PREDICTED: ras-related ( 206) 315 71.9 9.9e-13
XP_006715825 (OMIM: 179550) PREDICTED: ras-related ( 206) 315 71.9 9.9e-13
XP_005263785 (OMIM: 179551) PREDICTED: ras-related ( 206) 313 71.5 1.3e-12
NP_002872 (OMIM: 179551) ras-related protein Ral-B ( 206) 313 71.5 1.3e-12
XP_005263786 (OMIM: 179551) PREDICTED: ras-related ( 206) 313 71.5 1.3e-12
XP_005263784 (OMIM: 179551) PREDICTED: ras-related ( 206) 313 71.5 1.3e-12
XP_016860111 (OMIM: 179551) PREDICTED: ras-related ( 206) 313 71.5 1.3e-12
XP_005263781 (OMIM: 179551) PREDICTED: ras-related ( 228) 313 71.5 1.4e-12
XP_016860110 (OMIM: 179551) PREDICTED: ras-related ( 228) 313 71.5 1.4e-12
XP_011509875 (OMIM: 179551) PREDICTED: ras-related ( 229) 313 71.5 1.4e-12
NP_005605 (OMIM: 601293) GTP-binding protein Rheb ( 184) 309 70.6 2.1e-12
NP_002877 (OMIM: 179541) ras-related protein Rap-2 ( 183) 307 70.2 2.7e-12
NP_060064 (OMIM: 607863) GTP-binding protein Di-Ra ( 199) 305 69.9 3.8e-12
NP_001010942 (OMIM: 179530) ras-related protein Ra ( 184) 303 69.5 4.7e-12
NP_056461 (OMIM: 179530) ras-related protein Rap-1 ( 184) 303 69.5 4.7e-12
NP_002921 (OMIM: 609592) GTP-binding protein Rit2 ( 217) 301 69.1 7e-12
NP_001177655 (OMIM: 612664) ras-related and estrog ( 180) 290 66.9 2.7e-11
NP_001243749 (OMIM: 609591,615355) GTP-binding pro ( 183) 287 66.3 4.2e-11
NP_203524 (OMIM: 109800,114480,137215,163200,19007 ( 189) 286 66.1 4.9e-11
XP_006719132 (OMIM: 109800,114480,137215,163200,19 ( 189) 286 66.1 4.9e-11
XP_011514759 (OMIM: 601293) PREDICTED: GTP-binding ( 173) 285 65.9 5.3e-11
XP_016874782 (OMIM: 109800,114480,137215,163200,19 ( 227) 286 66.2 5.7e-11
XP_016861376 (OMIM: 608435) PREDICTED: ras-related ( 208) 283 65.5 8e-11
NP_001078518 (OMIM: 608435) ras-related protein M- ( 208) 283 65.5 8e-11
NP_001239019 (OMIM: 608435) ras-related protein M- ( 208) 283 65.5 8e-11
NP_036351 (OMIM: 608435) ras-related protein M-Ras ( 208) 283 65.5 8e-11
XP_005247285 (OMIM: 608435) PREDICTED: ras-related ( 208) 283 65.5 8e-11
NP_002875 (OMIM: 179520) ras-related protein Rap-1 ( 184) 282 65.3 8.4e-11
XP_016857451 (OMIM: 179520) PREDICTED: ras-related ( 184) 282 65.3 8.4e-11
NP_001278825 (OMIM: 179520) ras-related protein Ra ( 184) 282 65.3 8.4e-11
XP_016857452 (OMIM: 179520) PREDICTED: ras-related ( 184) 282 65.3 8.4e-11
NP_001010935 (OMIM: 179520) ras-related protein Ra ( 184) 282 65.3 8.4e-11
XP_016857453 (OMIM: 179520) PREDICTED: ras-related ( 184) 282 65.3 8.4e-11
NP_660156 (OMIM: 607862) GTP-binding protein Di-Ra ( 198) 280 64.9 1.2e-10
XP_011526015 (OMIM: 607862) PREDICTED: GTP-binding ( 232) 280 65.0 1.3e-10
NP_006261 (OMIM: 165090) ras-related protein R-Ras ( 218) 279 64.8 1.4e-10
NP_001123914 (OMIM: 109800,137550,162900,163200,18 ( 189) 277 64.3 1.7e-10
NP_005334 (OMIM: 109800,137550,162900,163200,18847 ( 189) 277 64.3 1.7e-10
XP_011518955 (OMIM: 109800,114480,137215,163200,19 ( 188) 275 63.9 2.2e-10
NP_004976 (OMIM: 109800,114480,137215,163200,19007 ( 188) 275 63.9 2.2e-10
>>NP_996563 (OMIM: 612403) ras-like protein family membe (242 aa)
initn: 1598 init1: 1598 opt: 1598 Z-score: 1720.8 bits: 325.8 E(85289): 4.2e-89
Smith-Waterman score: 1598; 100.0% identity (100.0% similar) in 242 aa overlap (1-242:1-242)
10 20 30 40 50 60
pF1KE4 MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNT
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 GKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 GKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 YLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 YLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE4 NYEDVCDVFQHLCKEVSKMHGLSGERRRASIIPRPRSPNMQDLKRRFKQALSPKVKAPSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_996 NYEDVCDVFQHLCKEVSKMHGLSGERRRASIIPRPRSPNMQDLKRRFKQALSPKVKAPSA
190 200 210 220 230 240
pF1KE4 LG
::
NP_996 LG
>>NP_001318055 (OMIM: 612403) ras-like protein family me (200 aa)
initn: 1327 init1: 1327 opt: 1327 Z-score: 1432.1 bits: 272.1 E(85289): 5e-73
Smith-Waterman score: 1327; 100.0% identity (100.0% similar) in 200 aa overlap (43-242:1-200)
20 30 40 50 60 70
pF1KE4 APIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNTGKLYSRLVYVEG
::::::::::::::::::::::::::::::
NP_001 MIVRFLTKRFIGDYEPNTGKLYSRLVYVEG
10 20 30
80 90 100 110 120 130
pF1KE4 DQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDSYLSIRPLYQHIR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDSYLSIRPLYQHIR
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE4 KVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSENYEDVCDVFQHL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSENYEDVCDVFQHL
100 110 120 130 140 150
200 210 220 230 240
pF1KE4 CKEVSKMHGLSGERRRASIIPRPRSPNMQDLKRRFKQALSPKVKAPSALG
::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CKEVSKMHGLSGERRRASIIPRPRSPNMQDLKRRFKQALSPKVKAPSALG
160 170 180 190 200
>>NP_076429 (OMIM: 612404) ras-like protein family membe (248 aa)
initn: 779 init1: 365 opt: 797 Z-score: 863.9 bits: 167.3 E(85289): 2.2e-41
Smith-Waterman score: 797; 54.2% identity (83.8% similar) in 216 aa overlap (28-241:34-248)
10 20 30 40 50
pF1KE4 MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYE
.:.::.::. :::.:..:::::::::::::
NP_076 IQNMCTIAEYPAPGNAAASDCCVGAAGRRLVKIAVVGASGVGKTALVVRFLTKRFIGDYE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE4 PNTGKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITD
:.:.::.: : .::. :.::.::::: .:.... . ..:..:..::.. ..:.::::
NP_076 RNAGNLYTRQVQIEGETLALQVQDTPG-IQVHENSLSCSEQLNRCIRWADAVVIVFSITD
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE4 YDSYLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEIS
: :: : :.::....: .. ::..:.::.:::: .::. : :.:::. :: : :.:
NP_076 YKSYELISQLHQHVQQLHLGTRLPVVVVANKADLLHIKQVDPQLGLQLASMLGCSFYEVS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE4 TSENYEDVCDVFQHLCKEVSKMHGLSG--ERRRASIIPRPRSPNMQDLKRRFKQALSPKV
.::::.:: ..:. ::::::. . :. :.::.:.::::.:::::::::::::::: ::
NP_076 VSENYNDVYSAFHVLCKEVSHKQQPSSTPEKRRTSLIPRPKSPNMQDLKRRFKQALSAKV
190 200 210 220 230 240
240
pF1KE4 KAPSALG
.. ...
NP_076 RTVTSV
>>NP_116307 (OMIM: 612664) ras-related and estrogen-regu (199 aa)
initn: 425 init1: 262 opt: 426 Z-score: 468.5 bits: 93.8 E(85289): 2.3e-19
Smith-Waterman score: 426; 38.0% identity (70.1% similar) in 184 aa overlap (27-210:6-181)
10 20 30 40 50 60
pF1KE4 MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNT
..:::..: . :::::..::::::::: .:.:.
NP_116 MAKSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTL
10 20 30
70 80 90 100 110 120
pF1KE4 GKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDS
. : . . .. . .:..: :: : :.. : . .:.:::.:::.::: :
NP_116 ESTYRHQATIDDEVVSMEILDTAG----QEDTIQREGHM----RWGEGFVLVYDITDRGS
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 YLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSE
. . :: . . ... ... .:.::::.:: :.:::.:..: .::.::. : : :.
NP_116 FEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACT
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE4 NYEDVCDVFQHLCKEVSKMHGLSGERRRASIIPRPRSPNMQDLKRRFKQALSPKVKAPSA
. .. ..: .::.:: . . ..:. :: :
NP_116 GEGNITEIFYELCREVRRRRMVQGKTRRRSSTTHVKQAINKMLTKISS
160 170 180 190
>>XP_016875610 (OMIM: 612664) PREDICTED: ras-related and (196 aa)
initn: 366 init1: 262 opt: 367 Z-score: 405.5 bits: 82.1 E(85289): 7.6e-16
Smith-Waterman score: 367; 35.7% identity (69.0% similar) in 168 aa overlap (43-210:19-178)
20 30 40 50 60 70
pF1KE4 APIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNTGKLYSRLVYVEG
..::::::::: .:.:. . : . . ..
XP_016 MNSGPVVTQQPAHCHAHTLVVRFLTKRFIWEYDPTLESTYRHQATIDD
10 20 30 40
80 90 100 110 120 130
pF1KE4 DQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDSYLSIRPLYQHIR
. .:..: :: : .:.. . ..:.:::.:::.::: :. . :: . .
XP_016 EVVSMEILDTAGQ---EDTIQR-----EGHMRWGEGFVLVYDITDRGSFEEVLPLKNILD
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE4 KVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSENYEDVCDVFQHL
... ... .:.::::.:: :.:::.:..: .::.::. : : :. . .. ..: .:
XP_016 EIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYEL
110 120 130 140 150 160
200 210 220 230 240
pF1KE4 CKEVSKMHGLSGERRRASIIPRPRSPNMQDLKRRFKQALSPKVKAPSALG
:.:: . . ..:. :: :
XP_016 CREVRRRRMVQGKTRRRSSTTHVKQAINKMLTKISS
170 180 190
>>NP_008843 (OMIM: 609591,615355) GTP-binding protein Ri (219 aa)
initn: 347 init1: 180 opt: 362 Z-score: 399.5 bits: 81.2 E(85289): 1.6e-15
Smith-Waterman score: 362; 34.5% identity (62.1% similar) in 206 aa overlap (19-218:13-210)
10 20 30 40 50 60
pF1KE4 MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNT
:: : .. ::..:::: :::::: ..:...:: :..:.
NP_008 MDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTI
10 20 30 40 50
70 80 90 100 110 120
pF1KE4 GKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDS
:. . .. . .:.: :: : : . . :. . .:::.. ::::: :
NP_008 EDAYKIRIRIDDEPANLDILDTAG----QAEFTAMRDQYMRA---GEGFIICYSITDRRS
60 70 80 90 100
130 140 150 160 170 180
pF1KE4 YLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSE
. .: . : : .:. . .::..::::.:: . ::: ..:. :: :.. :.: :..
NP_008 FHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAY
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 NYEDVCDVFQHLCKEVSKMHG---LSGERR---RASIIPRPRSPNMQDLKRRFKQALSPK
: . :::. : .:. . . :. :.. . :. : .::
NP_008 RYY-IDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
170 180 190 200 210
240
pF1KE4 VKAPSALG
>>NP_001243750 (OMIM: 609591,615355) GTP-binding protein (236 aa)
initn: 347 init1: 180 opt: 362 Z-score: 399.0 bits: 81.2 E(85289): 1.7e-15
Smith-Waterman score: 362; 34.5% identity (62.1% similar) in 206 aa overlap (19-218:30-227)
10 20 30 40
pF1KE4 MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLT
:: : .. ::..:::: :::::: ..:..
NP_001 MERWLFLGATEEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFIS
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE4 KRFIGDYEPNTGKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGF
.:: :..:. :. . .. . .:.: :: : : . . :. . .:::
NP_001 HRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAG----QAEFTAMRDQYMRA---GEGF
70 80 90 100 110
110 120 130 140 150 160
pF1KE4 LLVYSITDYDSYLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANEL
.. ::::: :. .: . : : .:. . .::..::::.:: . ::: ..:. :: :.
NP_001 IICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREF
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE4 GSLFLEISTSENYEDVCDVFQHLCKEVSKMHG---LSGERR---RASIIPRPRSPNMQDL
. :.: :.. : . :::. : .:. . . :. :.. . :. : .::
NP_001 SCPFFETSAAYRYY-IDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKK
180 190 200 210 220 230
230 240
pF1KE4 KRRFKQALSPKVKAPSALG
NP_001 DSVT
>>NP_066361 (OMIM: 179540) ras-related protein Rap-2a pr (183 aa)
initn: 316 init1: 175 opt: 318 Z-score: 353.5 bits: 72.4 E(85289): 6e-13
Smith-Waterman score: 318; 34.3% identity (68.0% similar) in 172 aa overlap (26-197:2-165)
10 20 30 40 50 60
pF1KE4 MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNT
.. :..:::.: :::::. :.:.: :: :.:.
NP_066 MREYKVVVLGSGGVGKSALTVQFVTGTFIEKYDPTI
10 20 30
70 80 90 100 110 120
pF1KE4 GKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDS
.: . . :... :.: :: : :. :. .. .. ..::.::::... .:
NP_066 EDFYRKEIEVDSSPSVLEILDTAGTEQFA-SMRDLY------IKNGQGFILVYSLVNQQS
40 50 60 70 80
130 140 150 160 170 180
pF1KE4 YLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSE
. .:.:. ..: .:. :.:::.:::: :: :.:....: ::.: : :.: : ..
NP_066 FQDIKPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCPFMETS-AK
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE4 NYEDVCDVFQHLCKEVSKMHGLSGERRRASIIPRPRSPNMQDLKRRFKQALSPKVKAPSA
. : ..: .. ....
NP_066 SKTMVDELFAEIVRQMNYAAQPDKDDPCCSACNIQ
150 160 170 180
>>NP_036382 (OMIM: 600098) ras-related protein R-Ras2 is (204 aa)
initn: 282 init1: 186 opt: 316 Z-score: 350.7 bits: 72.1 E(85289): 8.5e-13
Smith-Waterman score: 316; 32.6% identity (64.0% similar) in 172 aa overlap (29-200:16-179)
10 20 30 40 50 60
pF1KE4 MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNT
.:.:.:.: :::::. ..:. . :. ::.:.
NP_036 MAAAGWRDGSGQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDYDPTI
10 20 30 40
70 80 90 100 110 120
pF1KE4 GKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDS
:.. .. :.: :: : :. . . .. . .::::::.:.:: :
NP_036 EDSYTKQCVIDDRAARLDILDTAG----QEEFGAMREQYMRT---GEGFLLVFSVTDRGS
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 YLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSE
. : . ..: .:. .. :.:..:::.:: : ::: ..: ::: .: ..: : ..
NP_036 FEEIYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEAS-AK
110 120 130 140 150
190 200 210 220 230 240
pF1KE4 NYEDVCDVFQHLCKEVSKMHGLSGERRRASIIPRPRSPNMQDLKRRFKQALSPKVKAPSA
.: ..:..: . . :..
NP_036 IRMNVDQAFHELVRVIRKFQEQECPPSPEPTRKEKDKKGCHCVIF
160 170 180 190 200
>>NP_005393 (OMIM: 179550) ras-related protein Ral-A pre (206 aa)
initn: 261 init1: 146 opt: 315 Z-score: 349.6 bits: 71.9 E(85289): 9.9e-13
Smith-Waterman score: 315; 31.1% identity (65.3% similar) in 193 aa overlap (29-216:16-200)
10 20 30 40 50 60
pF1KE4 MRPLSMSGHFLLAPIPESSSDYLLPKDIKLAVLGAGRVGKSAMIVRFLTKRFIGDYEPNT
:. ..:.: :::::. ..:. .:. ::::.
NP_005 MAANKPKGQNSLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTK
10 20 30 40
70 80 90 100 110 120
pF1KE4 GKLYSRLVYVEGDQLSLQIQDTPGGVQIQDSLPQVVDSLSKCVQWAEGFLLVYSITDYDS
. : . : ..:......: :: : :.. . :. . .:::: :.:::...:
NP_005 ADSYRKKVVLDGEEVQIDILDTAG----QEDYAAIRDNYFRS---GEGFLCVFSITEMES
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 YLSIRPLYQHIRKVHPDSKAPVIIVGNKGDLLHARQVQTQDGIQLANELGSLFLEISTSE
. . . ..: .:. : ..: ..::::.:: :::..... . :.. . ..: : ..
NP_005 FAATADFREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRAEQWNVNYVETS-AK
110 120 130 140 150
190 200 210 220 230
pF1KE4 NYEDVCDVFQHLCKEVS--KMHGL---SGERRRASIIPRPRSPNMQDLKRRFKQALSPKV
. .: :: : .:. ::. .:...: :. : :
NP_005 TRANVDKVFFDLMREIRARKMEDSKEKNGKKKRKSLAKRIRERCCIL
160 170 180 190 200
240
pF1KE4 KAPSALG
242 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 22:42:17 2016 done: Sat Nov 5 22:42:18 2016
Total Scan time: 6.160 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]