Result of FASTA (omim) for
pFN21AE4028
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4028, 236 aa
1>>>pF1KE4028 236 - 236 aa - 236 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.4699+/-0.000362; mu= 19.7064+/- 0.023
mean_var=78.5499+/-16.067, 0's: 0 Z-trim(115.3): 413 B-trim: 1331 in 2/53
Lambda= 0.144711
statistics sampled from 25144 (25650) to 25144 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.687), E-opt: 0.2 (0.301), width: 16
Scan time: 5.570
The best scores are: opt bits E(85289)
NP_001243750 (OMIM: 609591,615355) GTP-binding pro ( 236) 1566 336.1 3.3e-92
NP_008843 (OMIM: 609591,615355) GTP-binding protei ( 219) 1451 312.0 5.2e-85
NP_001243749 (OMIM: 609591,615355) GTP-binding pro ( 183) 1207 261.0 1e-69
NP_002921 (OMIM: 609592) GTP-binding protein Rit2 ( 217) 968 211.2 1.2e-54
NP_001259006 (OMIM: 609592) GTP-binding protein Ri ( 153) 683 151.5 7.7e-37
NP_036382 (OMIM: 600098) ras-related protein R-Ras ( 204) 631 140.8 1.7e-33
NP_004976 (OMIM: 109800,114480,137215,163200,19007 ( 188) 609 136.1 3.9e-32
XP_011518955 (OMIM: 109800,114480,137215,163200,19 ( 188) 609 136.1 3.9e-32
XP_006719132 (OMIM: 109800,114480,137215,163200,19 ( 189) 588 131.8 8.2e-31
NP_203524 (OMIM: 109800,114480,137215,163200,19007 ( 189) 588 131.8 8.2e-31
XP_016874782 (OMIM: 109800,114480,137215,163200,19 ( 227) 588 131.9 9.3e-31
NP_005334 (OMIM: 109800,137550,162900,163200,18847 ( 189) 585 131.1 1.3e-30
NP_001123914 (OMIM: 109800,137550,162900,163200,18 ( 189) 585 131.1 1.3e-30
NP_056461 (OMIM: 179530) ras-related protein Rap-1 ( 184) 584 130.9 1.4e-30
NP_001010942 (OMIM: 179530) ras-related protein Ra ( 184) 584 130.9 1.4e-30
NP_066361 (OMIM: 179540) ras-related protein Rap-2 ( 183) 581 130.3 2.2e-30
XP_016857451 (OMIM: 179520) PREDICTED: ras-related ( 184) 581 130.3 2.2e-30
NP_001278825 (OMIM: 179520) ras-related protein Ra ( 184) 581 130.3 2.2e-30
NP_001010935 (OMIM: 179520) ras-related protein Ra ( 184) 581 130.3 2.2e-30
NP_002875 (OMIM: 179520) ras-related protein Rap-1 ( 184) 581 130.3 2.2e-30
XP_016857452 (OMIM: 179520) PREDICTED: ras-related ( 184) 581 130.3 2.2e-30
XP_016857453 (OMIM: 179520) PREDICTED: ras-related ( 184) 581 130.3 2.2e-30
NP_001078518 (OMIM: 608435) ras-related protein M- ( 208) 581 130.4 2.4e-30
XP_005247285 (OMIM: 608435) PREDICTED: ras-related ( 208) 581 130.4 2.4e-30
NP_001239019 (OMIM: 608435) ras-related protein M- ( 208) 581 130.4 2.4e-30
NP_036351 (OMIM: 608435) ras-related protein M-Ras ( 208) 581 130.4 2.4e-30
XP_016861376 (OMIM: 608435) PREDICTED: ras-related ( 208) 581 130.4 2.4e-30
NP_006261 (OMIM: 165090) ras-related protein R-Ras ( 218) 577 129.5 4.4e-30
NP_002515 (OMIM: 114500,137550,162900,163200,16479 ( 189) 576 129.3 4.7e-30
NP_002877 (OMIM: 179541) ras-related protein Rap-2 ( 183) 573 128.6 7.1e-30
NP_005393 (OMIM: 179550) ras-related protein Ral-A ( 206) 539 121.6 1e-27
XP_011513768 (OMIM: 179550) PREDICTED: ras-related ( 206) 539 121.6 1e-27
XP_006715825 (OMIM: 179550) PREDICTED: ras-related ( 206) 539 121.6 1e-27
XP_005263785 (OMIM: 179551) PREDICTED: ras-related ( 206) 534 120.5 2.2e-27
XP_005263786 (OMIM: 179551) PREDICTED: ras-related ( 206) 534 120.5 2.2e-27
NP_002872 (OMIM: 179551) ras-related protein Ral-B ( 206) 534 120.5 2.2e-27
XP_016860111 (OMIM: 179551) PREDICTED: ras-related ( 206) 534 120.5 2.2e-27
XP_005263784 (OMIM: 179551) PREDICTED: ras-related ( 206) 534 120.5 2.2e-27
XP_016860110 (OMIM: 179551) PREDICTED: ras-related ( 228) 534 120.6 2.3e-27
XP_005263781 (OMIM: 179551) PREDICTED: ras-related ( 228) 534 120.6 2.3e-27
XP_011509875 (OMIM: 179551) PREDICTED: ras-related ( 229) 534 120.6 2.3e-27
XP_016857449 (OMIM: 179520) PREDICTED: ras-related ( 195) 531 119.9 3.2e-27
XP_016857450 (OMIM: 179520) PREDICTED: ras-related ( 195) 531 119.9 3.2e-27
NP_789765 (OMIM: 109800,137550,162900,163200,18847 ( 170) 528 119.2 4.5e-27
XP_016872852 (OMIM: 600098) PREDICTED: ras-related ( 182) 528 119.2 4.7e-27
NP_001170785 (OMIM: 600098) ras-related protein R- ( 169) 526 118.8 6e-27
XP_005247286 (OMIM: 608435) PREDICTED: ras-related ( 170) 500 113.3 2.6e-25
NP_116307 (OMIM: 612664) ras-related and estrogen- ( 199) 496 112.6 5.1e-25
XP_011509876 (OMIM: 179551) PREDICTED: ras-related ( 195) 434 99.6 4e-21
XP_016875610 (OMIM: 612664) PREDICTED: ras-related ( 196) 431 99.0 6.2e-21
>>NP_001243750 (OMIM: 609591,615355) GTP-binding protein (236 aa)
initn: 1566 init1: 1566 opt: 1566 Z-score: 1776.5 bits: 336.1 E(85289): 3.3e-92
Smith-Waterman score: 1566; 99.6% identity (100.0% similar) in 236 aa overlap (1-236:1-236)
10 20 30 40 50 60
pF1KE4 MERWLFLGATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFIS
::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MERWLFLGATEEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFIS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE4 HRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSIT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE4 DRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFET
130 140 150 160 170 180
190 200 210 220 230
pF1KE4 SAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
190 200 210 220 230
>>NP_008843 (OMIM: 609591,615355) GTP-binding protein Ri (219 aa)
initn: 1451 init1: 1451 opt: 1451 Z-score: 1647.1 bits: 312.0 E(85289): 5.2e-85
Smith-Waterman score: 1451; 100.0% identity (100.0% similar) in 219 aa overlap (18-236:1-219)
10 20 30 40 50 60
pF1KE4 MERWLFLGATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFIS
:::::::::::::::::::::::::::::::::::::::::::
NP_008 MDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFIS
10 20 30 40
70 80 90 100 110 120
pF1KE4 HRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSIT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 HRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSIT
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 DRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 DRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFET
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 SAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_008 SAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
170 180 190 200 210
>>NP_001243749 (OMIM: 609591,615355) GTP-binding protein (183 aa)
initn: 1207 init1: 1207 opt: 1207 Z-score: 1372.7 bits: 261.0 E(85289): 1e-69
Smith-Waterman score: 1207; 100.0% identity (100.0% similar) in 183 aa overlap (54-236:1-183)
30 40 50 60 70 80
pF1KE4 PVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDD
::::::::::::::::::::::::::::::
NP_001 MTMQFISHRFPEDHDPTIEDAYKIRIRIDD
10 20 30
90 100 110 120 130 140
pF1KE4 EPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDD
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE4 TPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKE
100 110 120 130 140 150
210 220 230
pF1KE4 KEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
:::::::::::::::::::::::::::::::::
NP_001 KEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
160 170 180
>>NP_002921 (OMIM: 609592) GTP-binding protein Rit2 isof (217 aa)
initn: 966 init1: 874 opt: 968 Z-score: 1102.2 bits: 211.2 E(85289): 1.2e-54
Smith-Waterman score: 968; 69.2% identity (89.6% similar) in 211 aa overlap (27-236:8-217)
10 20 30 40 50
pF1KE4 MERWLFLGATQEGPKRTMDSGTRPVGSCC-SSPAGLSREYKLVMLGAGGVGKSAMTMQFI
:: .: .: :::::.::::::::::::::::::
NP_002 MEVENEASCSPGSASGGSREYKVVMLGAGGVGKSAMTMQFI
10 20 30 40
60 70 80 90 100 110
pF1KE4 SHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSI
::.::. :::::::::: ..:::.::: ::::::::::::::::.::::.:::::::::.
NP_002 SHQFPDYHDPTIEDAYKTQVRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSV
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE4 TDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFE
:::.::.:. .::.::..::.: . :.:::::: ::.:.:::. ::::.::.:..: :::
NP_002 TDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQVSTEEGLSLAQEYNCGFFE
110 120 130 140 150 160
180 190 200 210 220 230
pF1KE4 TSAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
:::: :. :::.::.::::::.::. : :::: : :.:.::.::. ..::....:
NP_002 TSAALRFCIDDAFHGLVREIRKKESMPSL-MEKKLKRKDSLWKKLKGSLKKKRENMT
170 180 190 200 210
>>NP_001259006 (OMIM: 609592) GTP-binding protein Rit2 i (153 aa)
initn: 682 init1: 668 opt: 683 Z-score: 782.4 bits: 151.5 E(85289): 7.7e-37
Smith-Waterman score: 683; 73.9% identity (90.1% similar) in 142 aa overlap (27-166:8-149)
10 20 30 40 50
pF1KE4 MERWLFLGATQEGPKRTMDSGTRPVGSCC-SSPAGLSREYKLVMLGAGGVGKSAMTMQFI
:: .: .: :::::.::::::::::::::::::
NP_001 MEVENEASCSPGSASGGSREYKVVMLGAGGVGKSAMTMQFI
10 20 30 40
60 70 80 90 100 110
pF1KE4 SHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSI
::.::. :::::::::: ..:::.::: ::::::::::::::::.::::.:::::::::.
NP_001 SHQFPDYHDPTIEDAYKTQVRIDNEPAYLDILDTAGQAEFTAMREQYMRGGEGFIICYSV
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE4 TDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVT-KEEGLALAREFSCPFF
:::.::.:. .::.::..::.: . :.:::::: ::.:.:: : :: :
NP_001 TDRQSFQEAAKFKELIFQVRHTYEIPLVLVGNKIDLEQFRQPTLKEFGREEF
110 120 130 140 150
180 190 200 210 220 230
pF1KE4 ETSAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
>>NP_036382 (OMIM: 600098) ras-related protein R-Ras2 is (204 aa)
initn: 649 init1: 610 opt: 631 Z-score: 722.3 bits: 140.8 E(85289): 1.7e-33
Smith-Waterman score: 631; 52.7% identity (78.0% similar) in 182 aa overlap (38-218:14-195)
10 20 30 40 50 60
pF1KE4 GATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDH
.:.::..:.:::::::.:.:::. : :.
NP_036 MAAAGWRDGSGQEKYRLVVVGGGGVGKSALTIQFIQSYFVTDY
10 20 30 40
70 80 90 100 110 120
pF1KE4 DPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHE
::::::.: . :::. : ::::::::: :: :::.::::.::::.. .:.::: ::.:
NP_036 DPTIEDSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEE
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE4 VREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYY
. .:.. : ::. :. :..:.:::.:: . ::::.::: :::... ..:.:: :.
NP_036 IYKFQRQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMN
110 120 130 140 150 160
190 200 210 220 230
pF1KE4 IDDVFHALVREIRR-KEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
.:..:: ::: ::. .:.: . : : :.
NP_036 VDQAFHELVRVIRKFQEQECPPSPEPTRKEKDKKGCHCVIF
170 180 190 200
>>NP_004976 (OMIM: 109800,114480,137215,163200,190070,21 (188 aa)
initn: 617 init1: 470 opt: 609 Z-score: 697.9 bits: 136.1 E(85289): 3.9e-32
Smith-Waterman score: 609; 51.9% identity (81.2% similar) in 181 aa overlap (38-217:3-182)
10 20 30 40 50 60
pF1KE4 GATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDH
:::::..:::::::::.:.:.:...: ...
NP_004 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEY
10 20 30
70 80 90 100 110 120
pF1KE4 DPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHE
::::::.:. .. :: : ::::::::: :..::::::::.::::. ..:.. .::..
NP_004 DPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFED
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 VREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYY
...... : ::. ..:.:.:::::: :: . : : ... ::: .. ::.:::: :
NP_004 IHHYREQIKRVKDSEDVPMVLVGNKCDLPS-RTVDTKQAQDLARSYGIPFIETSAKTRQG
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 IDDVFHALVREIRR-KEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
.::.:..::::::. ::: . . .::.: :
NP_004 VDDAFYTLVREIRKHKEKMSKDGKKKKKKSKTKCVIM
160 170 180
>>XP_011518955 (OMIM: 109800,114480,137215,163200,190070 (188 aa)
initn: 617 init1: 470 opt: 609 Z-score: 697.9 bits: 136.1 E(85289): 3.9e-32
Smith-Waterman score: 609; 51.9% identity (81.2% similar) in 181 aa overlap (38-217:3-182)
10 20 30 40 50 60
pF1KE4 GATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDH
:::::..:::::::::.:.:.:...: ...
XP_011 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEY
10 20 30
70 80 90 100 110 120
pF1KE4 DPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHE
::::::.:. .. :: : ::::::::: :..::::::::.::::. ..:.. .::..
XP_011 DPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFED
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 VREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYY
...... : ::. ..:.:.:::::: :: . : : ... ::: .. ::.:::: :
XP_011 IHHYREQIKRVKDSEDVPMVLVGNKCDLPS-RTVDTKQAQDLARSYGIPFIETSAKTRQG
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 IDDVFHALVREIRR-KEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
.::.:..::::::. ::: . . .::.: :
XP_011 VDDAFYTLVREIRKHKEKMSKDGKKKKKKSKTKCVIM
160 170 180
>>XP_006719132 (OMIM: 109800,114480,137215,163200,190070 (189 aa)
initn: 587 init1: 469 opt: 588 Z-score: 674.1 bits: 131.8 E(85289): 8.2e-31
Smith-Waterman score: 588; 50.3% identity (80.6% similar) in 175 aa overlap (38-212:3-176)
10 20 30 40 50 60
pF1KE4 GATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDH
:::::..:::::::::.:.:.:...: ...
XP_006 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEY
10 20 30
70 80 90 100 110 120
pF1KE4 DPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHE
::::::.:. .. :: : ::::::::: :..::::::::.::::. ..:.. .::..
XP_006 DPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFED
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 VREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYY
...... : ::. ..:.:.:::::: :: . : : ... ::: .. ::.:::: :
XP_006 IHHYREQIKRVKDSEDVPMVLVGNKCDLPS-RTVDTKQAQDLARSYGIPFIETSAKTRQR
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 IDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
..:.:..::::::. . . . ::
XP_006 VEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
160 170 180
>>NP_203524 (OMIM: 109800,114480,137215,163200,190070,21 (189 aa)
initn: 587 init1: 469 opt: 588 Z-score: 674.1 bits: 131.8 E(85289): 8.2e-31
Smith-Waterman score: 588; 50.3% identity (80.6% similar) in 175 aa overlap (38-212:3-176)
10 20 30 40 50 60
pF1KE4 GATQEGPKRTMDSGTRPVGSCCSSPAGLSREYKLVMLGAGGVGKSAMTMQFISHRFPEDH
:::::..:::::::::.:.:.:...: ...
NP_203 MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEY
10 20 30
70 80 90 100 110 120
pF1KE4 DPTIEDAYKIRIRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHE
::::::.:. .. :: : ::::::::: :..::::::::.::::. ..:.. .::..
NP_203 DPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFED
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE4 VREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYY
...... : ::. ..:.:.:::::: :: . : : ... ::: .. ::.:::: :
NP_203 IHHYREQIKRVKDSEDVPMVLVGNKCDLPS-RTVDTKQAQDLARSYGIPFIETSAKTRQR
100 110 120 130 140 150
190 200 210 220 230
pF1KE4 IDDVFHALVREIRRKEKEAVLAMEKKSKPKNSVWKRLKSPFRKKKDSVT
..:.:..::::::. . . . ::
NP_203 VEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
160 170 180
236 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 19:02:33 2016 done: Mon Nov 7 19:02:34 2016
Total Scan time: 5.570 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]