Result of FASTA (omim) for
pFN21AE4027
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE4027, 236 aa
1>>>pF1KE4027 236 - 236 aa - 236 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3614+/-0.000362; mu= 16.3463+/- 0.023
mean_var=119.5379+/-25.619, 0's: 0 Z-trim(116.5): 118 B-trim: 1318 in 1/49
Lambda= 0.117306
statistics sampled from 27614 (27751) to 27614 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.325), width: 16
Scan time: 6.570
The best scores are: opt bits E(85289)
XP_011529631 (OMIM: 300079,300635,308240) PREDICTE ( 497) 1358 240.7 3.4e-63
NP_001158 (OMIM: 300079,300635,308240) E3 ubiquiti ( 497) 1358 240.7 3.4e-63
XP_006724817 (OMIM: 300079,300635,308240) PREDICTE ( 497) 1358 240.7 3.4e-63
NP_001191330 (OMIM: 300079,300635,308240) E3 ubiqu ( 497) 1358 240.7 3.4e-63
NP_892007 (OMIM: 601721) baculoviral IAP repeat-co ( 604) 320 65.2 3e-10
NP_001156 (OMIM: 601721) baculoviral IAP repeat-co ( 604) 320 65.2 3e-10
XP_016873132 (OMIM: 601721) PREDICTED: baculoviral ( 604) 320 65.2 3e-10
NP_071444 (OMIM: 605737) baculoviral IAP repeat-co ( 280) 309 62.9 6.6e-10
NP_647478 (OMIM: 605737) baculoviral IAP repeat-co ( 298) 309 62.9 6.9e-10
NP_001243095 (OMIM: 601712) baculoviral IAP repeat ( 569) 306 62.8 1.5e-09
NP_001243092 (OMIM: 601712) baculoviral IAP repeat ( 618) 306 62.8 1.6e-09
NP_001157 (OMIM: 601712) baculoviral IAP repeat-co ( 618) 306 62.8 1.6e-09
NP_004527 (OMIM: 600355) baculoviral IAP repeat-co (1403) 280 58.8 5.5e-08
NP_075043 (OMIM: 600355) baculoviral IAP repeat-co (1241) 227 49.8 2.5e-05
XP_005249090 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 264) 212 46.4 5.6e-05
XP_005249089 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 390) 212 46.6 7.2e-05
NP_037394 (OMIM: 610082) E3 ubiquitin-protein liga ( 445) 212 46.7 7.8e-05
NP_001243787 (OMIM: 608299) E3 ubiquitin-protein l ( 180) 194 43.2 0.00036
NP_079402 (OMIM: 608299) E3 ubiquitin-protein liga ( 372) 194 43.6 0.00057
NP_919247 (OMIM: 608299) E3 ubiquitin-protein liga ( 373) 194 43.6 0.00057
NP_001017368 (OMIM: 609735) E3 ubiquitin-protein l ( 363) 192 43.2 0.00071
NP_001159 (OMIM: 603352) baculoviral IAP repeat-co ( 142) 167 38.5 0.0074
XP_016870773 (OMIM: 610933,614436) PREDICTED: E3 u ( 460) 173 40.1 0.0077
XP_006717379 (OMIM: 610933,614436) PREDICTED: E3 u ( 690) 173 40.3 0.0099
NP_001177652 (OMIM: 610933,614436) E3 ubiquitin-pr ( 696) 173 40.4 0.01
>>XP_011529631 (OMIM: 300079,300635,308240) PREDICTED: E (497 aa)
initn: 1358 init1: 1358 opt: 1358 Z-score: 1255.4 bits: 240.7 E(85289): 3.4e-63
Smith-Waterman score: 1358; 80.1% identity (94.9% similar) in 236 aa overlap (1-236:262-497)
10 20 30
pF1KE4 MTGYEARLITFGTWMYSVNKEQLARAGFYA
:. ::::..:::::.:::::::::::::::
XP_011 GRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYA
240 250 260 270 280 290
40 50 60 70 80 90
pF1KE4 IGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLEGA
.:. :::.::::::::..:::.:::::::::::::::::::.::.:::::::::.:::
XP_011 LGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEEC
300 310 320 330 340 350
100 110 120 130 140 150
pF1KE4 LVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEVLV
::.::.::::::.::.:::: :::.::::::::.:::.::::::.:: ::::::.:::::
XP_011 LVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKIMEEKIQISGSNYKSLEVLV
360 370 380 390 400 410
160 170 180 190 200 210
pF1KE4 ADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTC
::::.::::. ..: .:::::.::: :: ::::::::::::::::.::.::.::::::::
XP_011 ADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
420 430 440 450 460 470
220 230
pF1KE4 KQCAEAVDRCPMCSAVIDFKQRVFMS
::::::::.:::: .:: :::..:::
XP_011 KQCAEAVDKCPMCYTVITFKQKIFMS
480 490
>--
initn: 247 init1: 189 opt: 218 Z-score: 212.7 bits: 47.8 E(85289): 4.1e-05
Smith-Waterman score: 218; 41.7% identity (66.7% similar) in 72 aa overlap (1-70:160-231)
10 20
pF1KE4 MTGYEARLITFGTW--MYSVNKEQLARAGF
: . :::: .: .: . .. ..:: ::.
XP_011 DRPSETHADYLLRTGQVVDISDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGL
130 140 150 160 170 180
30 40 50 60 70 80
pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLE
: : :.:::: ::: : ::.: . : .: . .:.: ..:
XP_011 YYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNLNIRSESDAVSSDRN
190 200 210 220 230 240
90 100 110 120 130 140
pF1KE4 GALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEV
XP_011 FPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTD
250 260 270 280 290 300
>>NP_001158 (OMIM: 300079,300635,308240) E3 ubiquitin-pr (497 aa)
initn: 1358 init1: 1358 opt: 1358 Z-score: 1255.4 bits: 240.7 E(85289): 3.4e-63
Smith-Waterman score: 1358; 80.1% identity (94.9% similar) in 236 aa overlap (1-236:262-497)
10 20 30
pF1KE4 MTGYEARLITFGTWMYSVNKEQLARAGFYA
:. ::::..:::::.:::::::::::::::
NP_001 GRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYA
240 250 260 270 280 290
40 50 60 70 80 90
pF1KE4 IGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLEGA
.:. :::.::::::::..:::.:::::::::::::::::::.::.:::::::::.:::
NP_001 LGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEEC
300 310 320 330 340 350
100 110 120 130 140 150
pF1KE4 LVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEVLV
::.::.::::::.::.:::: :::.::::::::.:::.::::::.:: ::::::.:::::
NP_001 LVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKIMEEKIQISGSNYKSLEVLV
360 370 380 390 400 410
160 170 180 190 200 210
pF1KE4 ADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTC
::::.::::. ..: .:::::.::: :: ::::::::::::::::.::.::.::::::::
NP_001 ADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
420 430 440 450 460 470
220 230
pF1KE4 KQCAEAVDRCPMCSAVIDFKQRVFMS
::::::::.:::: .:: :::..:::
NP_001 KQCAEAVDKCPMCYTVITFKQKIFMS
480 490
>--
initn: 247 init1: 189 opt: 218 Z-score: 212.7 bits: 47.8 E(85289): 4.1e-05
Smith-Waterman score: 218; 41.7% identity (66.7% similar) in 72 aa overlap (1-70:160-231)
10 20
pF1KE4 MTGYEARLITFGTW--MYSVNKEQLARAGF
: . :::: .: .: . .. ..:: ::.
NP_001 DRPSETHADYLLRTGQVVDISDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGL
130 140 150 160 170 180
30 40 50 60 70 80
pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLE
: : :.:::: ::: : ::.: . : .: . .:.: ..:
NP_001 YYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNLNIRSESDAVSSDRN
190 200 210 220 230 240
90 100 110 120 130 140
pF1KE4 GALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEV
NP_001 FPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTD
250 260 270 280 290 300
>>XP_006724817 (OMIM: 300079,300635,308240) PREDICTED: E (497 aa)
initn: 1358 init1: 1358 opt: 1358 Z-score: 1255.4 bits: 240.7 E(85289): 3.4e-63
Smith-Waterman score: 1358; 80.1% identity (94.9% similar) in 236 aa overlap (1-236:262-497)
10 20 30
pF1KE4 MTGYEARLITFGTWMYSVNKEQLARAGFYA
:. ::::..:::::.:::::::::::::::
XP_006 GRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYA
240 250 260 270 280 290
40 50 60 70 80 90
pF1KE4 IGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLEGA
.:. :::.::::::::..:::.:::::::::::::::::::.::.:::::::::.:::
XP_006 LGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEEC
300 310 320 330 340 350
100 110 120 130 140 150
pF1KE4 LVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEVLV
::.::.::::::.::.:::: :::.::::::::.:::.::::::.:: ::::::.:::::
XP_006 LVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKIMEEKIQISGSNYKSLEVLV
360 370 380 390 400 410
160 170 180 190 200 210
pF1KE4 ADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTC
::::.::::. ..: .:::::.::: :: ::::::::::::::::.::.::.::::::::
XP_006 ADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
420 430 440 450 460 470
220 230
pF1KE4 KQCAEAVDRCPMCSAVIDFKQRVFMS
::::::::.:::: .:: :::..:::
XP_006 KQCAEAVDKCPMCYTVITFKQKIFMS
480 490
>--
initn: 247 init1: 189 opt: 218 Z-score: 212.7 bits: 47.8 E(85289): 4.1e-05
Smith-Waterman score: 218; 41.7% identity (66.7% similar) in 72 aa overlap (1-70:160-231)
10 20
pF1KE4 MTGYEARLITFGTW--MYSVNKEQLARAGF
: . :::: .: .: . .. ..:: ::.
XP_006 DRPSETHADYLLRTGQVVDISDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGL
130 140 150 160 170 180
30 40 50 60 70 80
pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLE
: : :.:::: ::: : ::.: . : .: . .:.: ..:
XP_006 YYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNLNIRSESDAVSSDRN
190 200 210 220 230 240
90 100 110 120 130 140
pF1KE4 GALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEV
XP_006 FPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTD
250 260 270 280 290 300
>>NP_001191330 (OMIM: 300079,300635,308240) E3 ubiquitin (497 aa)
initn: 1358 init1: 1358 opt: 1358 Z-score: 1255.4 bits: 240.7 E(85289): 3.4e-63
Smith-Waterman score: 1358; 80.1% identity (94.9% similar) in 236 aa overlap (1-236:262-497)
10 20 30
pF1KE4 MTGYEARLITFGTWMYSVNKEQLARAGFYA
:. ::::..:::::.:::::::::::::::
NP_001 GRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYA
240 250 260 270 280 290
40 50 60 70 80 90
pF1KE4 IGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLEGA
.:. :::.::::::::..:::.:::::::::::::::::::.::.:::::::::.:::
NP_001 LGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEEC
300 310 320 330 340 350
100 110 120 130 140 150
pF1KE4 LVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEVLV
::.::.::::::.::.:::: :::.::::::::.:::.::::::.:: ::::::.:::::
NP_001 LVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDIKKIMEEKIQISGSNYKSLEVLV
360 370 380 390 400 410
160 170 180 190 200 210
pF1KE4 ADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTC
::::.::::. ..: .:::::.::: :: ::::::::::::::::.::.::.::::::::
NP_001 ADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVFVPCGHLVTC
420 430 440 450 460 470
220 230
pF1KE4 KQCAEAVDRCPMCSAVIDFKQRVFMS
::::::::.:::: .:: :::..:::
NP_001 KQCAEAVDKCPMCYTVITFKQKIFMS
480 490
>--
initn: 247 init1: 189 opt: 218 Z-score: 212.7 bits: 47.8 E(85289): 4.1e-05
Smith-Waterman score: 218; 41.7% identity (66.7% similar) in 72 aa overlap (1-70:160-231)
10 20
pF1KE4 MTGYEARLITFGTW--MYSVNKEQLARAGF
: . :::: .: .: . .. ..:: ::.
NP_001 DRPSETHADYLLRTGQVVDISDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGL
130 140 150 160 170 180
30 40 50 60 70 80
pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLE
: : :.:::: ::: : ::.: . : .: . .:.: ..:
NP_001 YYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVLGRNLNIRSESDAVSSDRN
190 200 210 220 230 240
90 100 110 120 130 140
pF1KE4 GALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEV
NP_001 FPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTD
250 260 270 280 290 300
>>NP_892007 (OMIM: 601721) baculoviral IAP repeat-contai (604 aa)
initn: 646 init1: 295 opt: 320 Z-score: 305.1 bits: 65.2 E(85289): 3e-10
Smith-Waterman score: 412; 36.0% identity (65.1% similar) in 189 aa overlap (1-173:252-440)
10 20
pF1KE4 MTGYEARLITFGTWMYSV--NKEQLARAGF
: . ::. :: .: :: : :::: :::
NP_892 MSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTHAARFKTFFNWPSSVLVNPEQLASAGF
230 240 250 260 270 280
30 40 50 60 70 80
pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNI-----HL
: .:. : :.:: : ::: :. .::: :::::.: :.::.. ::.:.: .. ::
NP_892 YYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHL
290 300 310 320 330 340
90 100 110 120 130
pF1KE4 TRSL---------EGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEE
..: :.: . . :. . . .. .:... :..:::. . ::. ...
NP_892 LEQLLSTSDSPGDENAESSIIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQR
350 360 370 380 390 400
140 150 160 170 180 190
pF1KE4 RIQTSGSNYKTLEVLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMD
.: ..: ::. .. :: ::..:. . :.: .... ..:
NP_892 KILATGENYRLVNDLVLDLLNAEDEIREEERERATEEKESNDLLLIRKNRMALFQHLTCV
410 420 430 440 450 460
200 210 220 230
pF1KE4 RHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS
NP_892 IPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVFRNSLQEAEAVL
470 480 490 500 510 520
>--
initn: 321 init1: 270 opt: 285 Z-score: 273.1 bits: 59.2 E(85289): 1.8e-08
Smith-Waterman score: 285; 33.8% identity (65.5% similar) in 142 aa overlap (113-236:463-604)
90 100 110 120 130 140
pF1KE4 LTRSLEGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSN
:.:. . :. .. . ..... ::: .
NP_892 ERATEEKESNDLLLIRKNRMALFQHLTCVIPILDSLLTAGIINEQEHDVIKQKTQTSLQA
440 450 460 470 480 490
150 160 170 180
pF1KE4 YKTLE-VLVADLVSA---QKDTTENE---LNQTSLQREIS--P---------EEPLRRLQ
. .. .:: ..: ... : : .. .:..:. : :: :::::
NP_892 RELIDTILVKGNIAATVFRNSLQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQ
500 510 520 530 540 550
190 200 210 220 230
pF1KE4 EEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS
::. ::.:::.....:::::::::.::.:: .. .::.: ..: :.:.:
NP_892 EERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTFLS
560 570 580 590 600
>--
initn: 394 init1: 196 opt: 239 Z-score: 231.0 bits: 51.4 E(85289): 4e-06
Smith-Waterman score: 239; 38.8% identity (69.4% similar) in 85 aa overlap (1-81:166-250)
10 20
pF1KE4 MTGYEARLITFGTWMYS-VNKEQLARAGFY
:.. .:::.:: :: . .. .::.::::
NP_892 GSYSNSPSNPVNSRANQDFSALMRSSYHCAMNNENARLLTFQTWPLTFLSPTDLAKAGFY
140 150 160 170 180 190
30 40 50 60 70 80
pF1KE4 AIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYL---LEEKGHEYINNIHLTRS
:: :.: :: ::: :.::.::.. .: . .: : .. :.. .. ..:.
NP_892 YIGPGDRVACFACGGKLSNWEPKDNAMSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTH
200 210 220 230 240 250
90 100 110 120 130 140
pF1KE4 LEGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTL
NP_892 AARFKTFFNWPSSVLVNPEQLASAGFYYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKW
260 270 280 290 300 310
>--
initn: 210 init1: 196 opt: 210 Z-score: 204.5 bits: 46.5 E(85289): 0.00012
Smith-Waterman score: 210; 41.2% identity (71.2% similar) in 80 aa overlap (7-84:32-108)
10 20 30
pF1KE4 MTGYEARLITFGTWMYSV--NKEQLARAGFYAIGQE
:. :..:. .: ....::::::: : .
NP_892 NIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAGVPVSERSLARAGFYYTGVN
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE4 DKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLEGALVQT
:::.:: :: : ::: ..: :.: : ::.:... .. . .::.. :
NP_892 DKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFV---QSLNSVNNLEATSQPTFPSSVT
70 80 90 100 110
100 110 120 130 140 150
pF1KE4 TKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEVLVADLV
NP_892 NSTHSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSSYHCAMNNENARLLTFQT
120 130 140 150 160 170
>>NP_001156 (OMIM: 601721) baculoviral IAP repeat-contai (604 aa)
initn: 646 init1: 295 opt: 320 Z-score: 305.1 bits: 65.2 E(85289): 3e-10
Smith-Waterman score: 412; 36.0% identity (65.1% similar) in 189 aa overlap (1-173:252-440)
10 20
pF1KE4 MTGYEARLITFGTWMYSV--NKEQLARAGF
: . ::. :: .: :: : :::: :::
NP_001 MSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTHAARFKTFFNWPSSVLVNPEQLASAGF
230 240 250 260 270 280
30 40 50 60 70 80
pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNI-----HL
: .:. : :.:: : ::: :. .::: :::::.: :.::.. ::.:.: .. ::
NP_001 YYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHL
290 300 310 320 330 340
90 100 110 120 130
pF1KE4 TRSL---------EGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEE
..: :.: . . :. . . .. .:... :..:::. . ::. ...
NP_001 LEQLLSTSDSPGDENAESSIIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQR
350 360 370 380 390 400
140 150 160 170 180 190
pF1KE4 RIQTSGSNYKTLEVLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMD
.: ..: ::. .. :: ::..:. . :.: .... ..:
NP_001 KILATGENYRLVNDLVLDLLNAEDEIREEERERATEEKESNDLLLIRKNRMALFQHLTCV
410 420 430 440 450 460
200 210 220 230
pF1KE4 RHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS
NP_001 IPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVFRNSLQEAEAVL
470 480 490 500 510 520
>--
initn: 321 init1: 270 opt: 285 Z-score: 273.1 bits: 59.2 E(85289): 1.8e-08
Smith-Waterman score: 285; 33.8% identity (65.5% similar) in 142 aa overlap (113-236:463-604)
90 100 110 120 130 140
pF1KE4 LTRSLEGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSN
:.:. . :. .. . ..... ::: .
NP_001 ERATEEKESNDLLLIRKNRMALFQHLTCVIPILDSLLTAGIINEQEHDVIKQKTQTSLQA
440 450 460 470 480 490
150 160 170 180
pF1KE4 YKTLE-VLVADLVSA---QKDTTENE---LNQTSLQREIS--P---------EEPLRRLQ
. .. .:: ..: ... : : .. .:..:. : :: :::::
NP_001 RELIDTILVKGNIAATVFRNSLQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQ
500 510 520 530 540 550
190 200 210 220 230
pF1KE4 EEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS
::. ::.:::.....:::::::::.::.:: .. .::.: ..: :.:.:
NP_001 EERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTFLS
560 570 580 590 600
>--
initn: 394 init1: 196 opt: 239 Z-score: 231.0 bits: 51.4 E(85289): 4e-06
Smith-Waterman score: 239; 38.8% identity (69.4% similar) in 85 aa overlap (1-81:166-250)
10 20
pF1KE4 MTGYEARLITFGTWMYS-VNKEQLARAGFY
:.. .:::.:: :: . .. .::.::::
NP_001 GSYSNSPSNPVNSRANQDFSALMRSSYHCAMNNENARLLTFQTWPLTFLSPTDLAKAGFY
140 150 160 170 180 190
30 40 50 60 70 80
pF1KE4 AIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYL---LEEKGHEYINNIHLTRS
:: :.: :: ::: :.::.::.. .: . .: : .. :.. .. ..:.
NP_001 YIGPGDRVACFACGGKLSNWEPKDNAMSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTH
200 210 220 230 240 250
90 100 110 120 130 140
pF1KE4 LEGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTL
NP_001 AARFKTFFNWPSSVLVNPEQLASAGFYYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKW
260 270 280 290 300 310
>--
initn: 210 init1: 196 opt: 210 Z-score: 204.5 bits: 46.5 E(85289): 0.00012
Smith-Waterman score: 210; 41.2% identity (71.2% similar) in 80 aa overlap (7-84:32-108)
10 20 30
pF1KE4 MTGYEARLITFGTWMYSV--NKEQLARAGFYAIGQE
:. :..:. .: ....::::::: : .
NP_001 NIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAGVPVSERSLARAGFYYTGVN
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE4 DKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLEGALVQT
:::.:: :: : ::: ..: :.: : ::.:... .. . .::.. :
NP_001 DKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFV---QSLNSVNNLEATSQPTFPSSVT
70 80 90 100 110
100 110 120 130 140 150
pF1KE4 TKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEVLVADLV
NP_001 NSTHSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSSYHCAMNNENARLLTFQT
120 130 140 150 160 170
>>XP_016873132 (OMIM: 601721) PREDICTED: baculoviral IAP (604 aa)
initn: 646 init1: 295 opt: 320 Z-score: 305.1 bits: 65.2 E(85289): 3e-10
Smith-Waterman score: 412; 36.0% identity (65.1% similar) in 189 aa overlap (1-173:252-440)
10 20
pF1KE4 MTGYEARLITFGTWMYSV--NKEQLARAGF
: . ::. :: .: :: : :::: :::
XP_016 MSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTHAARFKTFFNWPSSVLVNPEQLASAGF
230 240 250 260 270 280
30 40 50 60 70 80
pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNI-----HL
: .:. : :.:: : ::: :. .::: :::::.: :.::.. ::.:.: .. ::
XP_016 YYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHL
290 300 310 320 330 340
90 100 110 120 130
pF1KE4 TRSL---------EGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEE
..: :.: . . :. . . .. .:... :..:::. . ::. ...
XP_016 LEQLLSTSDSPGDENAESSIIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQR
350 360 370 380 390 400
140 150 160 170 180 190
pF1KE4 RIQTSGSNYKTLEVLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMD
.: ..: ::. .. :: ::..:. . :.: .... ..:
XP_016 KILATGENYRLVNDLVLDLLNAEDEIREEERERATEEKESNDLLLIRKNRMALFQHLTCV
410 420 430 440 450 460
200 210 220 230
pF1KE4 RHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS
XP_016 IPILDSLLTAGIINEQEHDVIKQKTQTSLQARELIDTILVKGNIAATVFRNSLQEAEAVL
470 480 490 500 510 520
>--
initn: 321 init1: 270 opt: 285 Z-score: 273.1 bits: 59.2 E(85289): 1.8e-08
Smith-Waterman score: 285; 33.8% identity (65.5% similar) in 142 aa overlap (113-236:463-604)
90 100 110 120 130 140
pF1KE4 LTRSLEGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSN
:.:. . :. .. . ..... ::: .
XP_016 ERATEEKESNDLLLIRKNRMALFQHLTCVIPILDSLLTAGIINEQEHDVIKQKTQTSLQA
440 450 460 470 480 490
150 160 170 180
pF1KE4 YKTLE-VLVADLVSA---QKDTTENE---LNQTSLQREIS--P---------EEPLRRLQ
. .. .:: ..: ... : : .. .:..:. : :: :::::
XP_016 RELIDTILVKGNIAATVFRNSLQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQ
500 510 520 530 540 550
190 200 210 220 230
pF1KE4 EEKLCKICMDRHIAVVFIPCGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS
::. ::.:::.....:::::::::.::.:: .. .::.: ..: :.:.:
XP_016 EERTCKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTFLS
560 570 580 590 600
>--
initn: 394 init1: 196 opt: 239 Z-score: 231.0 bits: 51.4 E(85289): 4e-06
Smith-Waterman score: 239; 38.8% identity (69.4% similar) in 85 aa overlap (1-81:166-250)
10 20
pF1KE4 MTGYEARLITFGTWMYS-VNKEQLARAGFY
:.. .:::.:: :: . .. .::.::::
XP_016 GSYSNSPSNPVNSRANQDFSALMRSSYHCAMNNENARLLTFQTWPLTFLSPTDLAKAGFY
140 150 160 170 180 190
30 40 50 60 70 80
pF1KE4 AIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYL---LEEKGHEYINNIHLTRS
:: :.: :: ::: :.::.::.. .: . .: : .. :.. .. ..:.
XP_016 YIGPGDRVACFACGGKLSNWEPKDNAMSEHLRHFPKCPFIENQLQDTSRYTVSNLSMQTH
200 210 220 230 240 250
90 100 110 120 130 140
pF1KE4 LEGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTL
XP_016 AARFKTFFNWPSSVLVNPEQLASAGFYYVGNSDDVKCFCCDGGLRCWESGDDPWVQHAKW
260 270 280 290 300 310
>--
initn: 210 init1: 196 opt: 210 Z-score: 204.5 bits: 46.5 E(85289): 0.00012
Smith-Waterman score: 210; 41.2% identity (71.2% similar) in 80 aa overlap (7-84:32-108)
10 20 30
pF1KE4 MTGYEARLITFGTWMYSV--NKEQLARAGFYAIGQE
:. :..:. .: ....::::::: : .
XP_016 NIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAGVPVSERSLARAGFYYTGVN
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE4 DKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLEGALVQT
:::.:: :: : ::: ..: :.: : ::.:... .. . .::.. :
XP_016 DKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFV---QSLNSVNNLEATSQPTFPSSVT
70 80 90 100 110
100 110 120 130 140 150
pF1KE4 TKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEVLVADLV
XP_016 NSTHSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSSYHCAMNNENARLLTFQT
120 130 140 150 160 170
>>NP_071444 (OMIM: 605737) baculoviral IAP repeat-contai (280 aa)
initn: 488 init1: 280 opt: 309 Z-score: 298.8 bits: 62.9 E(85289): 6.6e-10
Smith-Waterman score: 480; 34.7% identity (57.7% similar) in 239 aa overlap (1-236:84-280)
10 20
pF1KE4 MTGYEARLITFGTWMYS--VNKEQLARAGF
: . : :: .: : . : : :: :::
NP_071 QILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGF
60 70 80 90 100 110
30 40 50 60 70 80
pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRS-L
. :..:::.:: : ::: .:: .::: .::::.:.:..::. ::........ :.: :
NP_071 FHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQL
120 130 140 150 160 170
90 100 110 120 130 140
pF1KE4 EGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLE
:. : . .: .:. . . .:: : :
NP_071 LGSW------DP----------WEEP------------EDAAPVAPS-VPASG--YPELP
180 190 200
150 160 170 180 190 200
pF1KE4 VLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHL
. . ...: : :.. : :::::::. ::.:.:: ...::.:::::
NP_071 T--------PRREVQSESAQEPGARDV--EAQLRRLQEERTCKVCLDRAVSIVFVPCGHL
210 220 230 240 250
210 220 230
pF1KE4 VTCKQCAEAVDRCPMCSAVIDFKQRVFMS
: : .:: ... ::.: : . . :.:.:
NP_071 V-CAECAPGLQLCPICRAPVRSRVRTFLS
260 270 280
>>NP_647478 (OMIM: 605737) baculoviral IAP repeat-contai (298 aa)
initn: 494 init1: 286 opt: 309 Z-score: 298.5 bits: 62.9 E(85289): 6.9e-10
Smith-Waterman score: 498; 34.3% identity (58.2% similar) in 239 aa overlap (1-236:84-298)
10 20
pF1KE4 MTGYEARLITFGTWMYS--VNKEQLARAGF
: . : :: .: : . : : :: :::
NP_647 QILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGF
60 70 80 90 100 110
30 40 50 60 70 80
pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRS-L
. :..:::.:: : ::: .:: .::: .::::.:.:..::. ::........ :.: :
NP_647 FHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQL
120 130 140 150 160 170
90 100 110 120 130 140
pF1KE4 EGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLE
:. . : . .. .. : : .... : : :.
NP_647 LGS--WDPWEEPEDAAPVAPSV-PASGYPELP------TPRREVQSESAQEPGG------
180 190 200 210
150 160 170 180 190 200
pF1KE4 VLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHL
:: . . . :.. : :::::::. ::.:.:: ...::.:::::
NP_647 ------VSPAEAQRAWWVLEPPGARDV--EAQLRRLQEERTCKVCLDRAVSIVFVPCGHL
220 230 240 250 260 270
210 220 230
pF1KE4 VTCKQCAEAVDRCPMCSAVIDFKQRVFMS
: : .:: ... ::.: : . . :.:.:
NP_647 V-CAECAPGLQLCPICRAPVRSRVRTFLS
280 290
>>NP_001243095 (OMIM: 601712) baculoviral IAP repeat-con (569 aa)
initn: 630 init1: 281 opt: 306 Z-score: 292.6 bits: 62.8 E(85289): 1.5e-09
Smith-Waterman score: 398; 36.1% identity (65.0% similar) in 180 aa overlap (1-164:217-396)
10 20
pF1KE4 MTGYEARLITFGTWMYSV--NKEQLARAGF
: . ::. :: : :: . :::: :::
NP_001 AMSEHRRHFPNCPFLENSLETLRFSISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGF
190 200 210 220 230 240
30 40 50 60 70 80
pF1KE4 YAIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNI-----HL
: .:..: :.:: : ::: :. .::: .::::.: :..:.. ::.:....: ::
NP_001 YYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHL
250 260 270 280 290 300
90 100 110 120 130
pF1KE4 TRSL---------EGALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEE
..: :.: . :. .. . ... .:... :..:::. ::. ..
NP_001 LEQLLSTSDTTGEENADPPIIHFGPGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQS
310 320 330 340 350 360
140 150 160 170 180 190
pF1KE4 RIQTSGSNYKTLEVLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMD
.: :.: ::::.. .:. :..:. . :.:
NP_001 KILTTGENYKTVNDIVSALLNAEDEKREEEKEKQAEEMASDDLSLIRKNRMALFQQLTCV
370 380 390 400 410 420
>--
initn: 311 init1: 272 opt: 289 Z-score: 277.0 bits: 59.9 E(85289): 1.1e-08
Smith-Waterman score: 289; 55.6% identity (84.1% similar) in 63 aa overlap (174-236:507-569)
150 160 170 180 190 200
pF1KE4 KTLEVLVADLVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIP
.: :: :::::::. ::.:::....:::::
NP_001 NCLKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIP
480 490 500 510 520 530
210 220 230
pF1KE4 CGHLVTCKQCAEAVDRCPMCSAVIDFKQRVFMS
:::::.:..:: .. .::.: ..: :.:.:
NP_001 CGHLVVCQECAPSLRKCPICRGIIKGTVRTFLS
540 550 560
>--
initn: 382 init1: 211 opt: 246 Z-score: 237.7 bits: 52.6 E(85289): 1.7e-06
Smith-Waterman score: 246; 45.7% identity (70.0% similar) in 70 aa overlap (1-69:132-201)
10 20
pF1KE4 MTGYEARLITFGTWMYS-VNKEQLARAGFY
:. :::..:. : . .. .:::::::
NP_001 GSYSSLSPNPLNSRAVEDISSSRTNPYSYAMSTEEARFLTYHMWPLTFLSPSELARAGFY
110 120 130 140 150 160
30 40 50 60 70 80
pF1KE4 AIGQEDKVQCFHCGGGLANWKPKEDPWEQHAKWYPGCKYLLEEKGHEYINNIHLTRSLEG
:: :.: :: ::: :.::.::.: .: . .:.: .:
NP_001 YIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRFSISNLSMQTHA
170 180 190 200 210 220
90 100 110 120 130 140
pF1KE4 ALVQTTKKTPSLTKRISDTIFPNPMLQEAIRMGFDFKDVKKIMEERIQTSGSNYKTLEVL
NP_001 ARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWF
230 240 250 260 270 280
>--
initn: 211 init1: 185 opt: 209 Z-score: 203.9 bits: 46.3 E(85289): 0.00013
Smith-Waterman score: 209; 33.0% identity (62.3% similar) in 106 aa overlap (18-119:13-117)
10 20 30 40 50 60
pF1KE4 MTGYEARLITFGTWMYSVNKEQLARAGFYAIGQEDKVQCFHCGGGLANWKPKEDPWEQHA
:....::::::: : .:::.:: :: : ::: ..: ..:
NP_001 MSTYSTFPAGVPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHK
10 20 30 40 50
70 80 90 100 110
pF1KE4 KWYPGCKYLLE----EKGHEYINNIHLTRSLEGALVQTTKKTPSLTKRISDTIFPNPMLQ
. ::.:... . : :. . :. .: : ... .. : .. :::. .
NP_001 QLYPSCSFIQNLVSASLGSTSKNTSPMRNSFAHSLSPTLEHSSLFSGSYS-SLSPNPLNS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE4 EAIRMGFDFKDVKKIMEERIQTSGSNYKTLEVLVADLVSAQKDTTENELNQTSLQREISP
.:.
NP_001 RAVEDISSSRTNPYSYAMSTEEARFLTYHMWPLTFLSPSELARAGFYYIGPGDRVACFAC
120 130 140 150 160 170
236 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 03:41:01 2016 done: Sun Nov 6 03:41:02 2016
Total Scan time: 6.570 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]