FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3994, 421 aa
  1>>>pF1KE3994 421 - 421 aa - 421 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.8250+/-0.00103; mu= 8.8747+/- 0.061
 mean_var=129.9735+/-25.981, 0's: 0 Z-trim(107.5): 134  B-trim: 0 in 0/49
 Lambda= 0.112499
 statistics sampled from 9444 (9608) to 9444 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.681), E-opt: 0.2 (0.295), width:  16
 Scan time:  3.030

The best scores are:                                      opt bits E(32554)
CCDS6924.1 ASB6 gene_id:140459|Hs108|chr9          ( 421) 2820 469.6 2.5e-132
CCDS75919.1 ASB6 gene_id:140459|Hs108|chr9         ( 392) 1576 267.7 1.4e-71
CCDS6925.1 ASB6 gene_id:140459|Hs108|chr9          ( 197)  873 153.3 1.9e-37


>>CCDS6924.1 ASB6 gene_id:140459|Hs108|chr9               (421 aa)
 initn: 2820 init1: 2820 opt: 2820  Z-score: 2489.1  bits: 469.6 E(32554): 2.5e-132
Smith-Waterman score: 2820; 100.0% identity (100.0% similar) in 421 aa overlap (1-421:1-421)

               10        20        30        40        50        60
pF1KE3 MPFLHGFRRIIFEYQPLVDAILGSLGIQDPERQESLDRPSYVASEESRILVLTELLERKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 MPFLHGFRRIIFEYQPLVDAILGSLGIQDPERQESLDRPSYVASEESRILVLTELLERKA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 HSPFYQEGVSNALLKMAELGLTRAADVLLRHGANLNFEDPVTYYTALHIAVLRNQPDMVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 HSPFYQEGVSNALLKMAELGLTRAADVLLRHGANLNFEDPVTYYTALHIAVLRNQPDMVE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 LLVHHGADVNRRDRIHESSPLDLASEEPERLPCLQRLLDLGADVNAADKHGKTALLHALA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 LLVHHGADVNRRDRIHESSPLDLASEEPERLPCLQRLLDLGADVNAADKHGKTALLHALA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 SSDGVQIHNTENIRLLLEGGADVKATTKDGDTVFTCIIFLLGETVGGDKEEAQMINRFCF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 SSDGVQIHNTENIRLLLEGGADVKATTKDGDTVFTCIIFLLGETVGGDKEEAQMINRFCF
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 QVTRLLLAHGADPSECPAHESLTHICLKSFKLHFPLLRFLLESGAAYNCSLHGASCWSGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 QVTRLLLAHGADPSECPAHESLTHICLKSFKLHFPLLRFLLESGAAYNCSLHGASCWSGF
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 HIIFERLCSHPGCTEDESHADLLRKAETVLDLMVTNSQKLQLPENFDIHPVGSLAEKIQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 HIIFERLCSHPGCTEDESHADLLRKAETVLDLMVTNSQKLQLPENFDIHPVGSLAEKIQA
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE3 LHFSLRQLESYPPPLKHLCRVAIRLYLQPWPVDVKVKALPLPDRLKWYLLSEHSGSVEDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 LHFSLRQLESYPPPLKHLCRVAIRLYLQPWPVDVKVKALPLPDRLKWYLLSEHSGSVEDD
              370       380       390       400       410       420

        
pF1KE3 I
       :
CCDS69 I
        

>>CCDS75919.1 ASB6 gene_id:140459|Hs108|chr9              (392 aa)
 initn: 1528 init1: 1528 opt: 1576  Z-score: 1398.4  bits: 267.7 E(32554): 1.4e-71
Smith-Waterman score: 2574; 93.1% identity (93.1% similar) in 421 aa overlap (1-421:1-392)

               10        20        30        40        50        60
pF1KE3 MPFLHGFRRIIFEYQPLVDAILGSLGIQDPERQESLDRPSYVASEESRILVLTELLERKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 MPFLHGFRRIIFEYQPLVDAILGSLGIQDPERQESLDRPSYVASEESRILVLTELLERKA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 HSPFYQEGVSNALLKMAELGLTRAADVLLRHGANLNFEDPVTYYTALHIAVLRNQPDMVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 HSPFYQEGVSNALLKMAELGLTRAADVLLRHGANLNFEDPVTYYTALHIAVLRNQPDMVE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 LLVHHGADVNRRDRIHESSPLDLASEEPERLPCLQRLLDLGADVNAADKHGKTALLHALA
       :::::::::::::::::::::::::::::::::::::::::::::::::::         
CCDS75 LLVHHGADVNRRDRIHESSPLDLASEEPERLPCLQRLLDLGADVNAADKHG---------
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KE3 SSDGVQIHNTENIRLLLEGGADVKATTKDGDTVFTCIIFLLGETVGGDKEEAQMINRFCF
                           ::::::::::::::::::::::::::::::::::::::::
CCDS75 --------------------ADVKATTKDGDTVFTCIIFLLGETVGGDKEEAQMINRFCF
                                 180       190       200       210 

              250       260       270       280       290       300
pF1KE3 QVTRLLLAHGADPSECPAHESLTHICLKSFKLHFPLLRFLLESGAAYNCSLHGASCWSGF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 QVTRLLLAHGADPSECPAHESLTHICLKSFKLHFPLLRFLLESGAAYNCSLHGASCWSGF
             220       230       240       250       260       270 

              310       320       330       340       350       360
pF1KE3 HIIFERLCSHPGCTEDESHADLLRKAETVLDLMVTNSQKLQLPENFDIHPVGSLAEKIQA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 HIIFERLCSHPGCTEDESHADLLRKAETVLDLMVTNSQKLQLPENFDIHPVGSLAEKIQA
             280       290       300       310       320       330 

              370       380       390       400       410       420
pF1KE3 LHFSLRQLESYPPPLKHLCRVAIRLYLQPWPVDVKVKALPLPDRLKWYLLSEHSGSVEDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 LHFSLRQLESYPPPLKHLCRVAIRLYLQPWPVDVKVKALPLPDRLKWYLLSEHSGSVEDD
             340       350       360       370       380       390 

        
pF1KE3 I
       :
CCDS75 I
        

>>CCDS6925.1 ASB6 gene_id:140459|Hs108|chr9               (197 aa)
 initn: 915 init1: 873 opt: 873  Z-score: 785.9  bits: 153.3 E(32554): 1.9e-37
Smith-Waterman score: 873; 100.0% identity (100.0% similar) in 134 aa overlap (1-134:1-134)

               10        20        30        40        50        60
pF1KE3 MPFLHGFRRIIFEYQPLVDAILGSLGIQDPERQESLDRPSYVASEESRILVLTELLERKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 MPFLHGFRRIIFEYQPLVDAILGSLGIQDPERQESLDRPSYVASEESRILVLTELLERKA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 HSPFYQEGVSNALLKMAELGLTRAADVLLRHGANLNFEDPVTYYTALHIAVLRNQPDMVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS69 HSPFYQEGVSNALLKMAELGLTRAADVLLRHGANLNFEDPVTYYTALHIAVLRNQPDMVE
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 LLVHHGADVNRRDRIHESSPLDLASEEPERLPCLQRLLDLGADVNAADKHGKTALLHALA
       ::::::::::::::                                              
CCDS69 LLVHHGADVNRRDREKLLCSMLWPAATGCRSTILRTFVSYWKEGQTSRPPPKMGTQCSPA
              130       140       150       160       170       180




421 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 08:09:42 2016 done: Sun Nov  6 08:09:42 2016
 Total Scan time:  3.030 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]