Result of FASTA (omim) for
pFN21AE3969
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3969, 418 aa
1>>>pF1KE3969 418 - 418 aa - 418 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5638+/-0.0005; mu= 15.7654+/- 0.031
mean_var=82.6874+/-16.965, 0's: 0 Z-trim(109.3): 157 B-trim: 134 in 1/49
Lambda= 0.141044
statistics sampled from 17258 (17443) to 17258 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.56), E-opt: 0.2 (0.205), width: 16
Scan time: 7.950
The best scores are: opt bits E(85289)
NP_689654 (OMIM: 609081) F-box/LRR-repeat protein ( 418) 2764 572.9 5.1e-163
XP_016874365 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 387) 2540 527.3 2.5e-149
XP_016874364 (OMIM: 609081) PREDICTED: F-box/LRR-r ( 404) 2539 527.1 3e-149
NP_001171835 (OMIM: 609086) F-box/LRR-repeat prote ( 404) 465 105.1 3.3e-22
XP_005257804 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 441) 465 105.1 3.5e-22
NP_001156787 (OMIM: 609083) F-box/LRR-repeat prote ( 701) 381 88.2 7.1e-17
XP_005272105 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 712) 368 85.5 4.5e-16
XP_006715961 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 584) 362 84.3 9e-16
XP_011514232 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 362 84.3 1.1e-15
XP_005250266 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 362 84.3 1.1e-15
XP_016867342 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 735) 362 84.3 1.1e-15
NP_659469 (OMIM: 609080) F-box/LRR-repeat protein ( 735) 362 84.3 1.1e-15
XP_016867341 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 362 84.4 1.1e-15
XP_005250264 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 792) 362 84.4 1.1e-15
XP_016867339 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 822) 362 84.4 1.2e-15
XP_005250262 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 825) 362 84.4 1.2e-15
NP_699181 (OMIM: 609082) F-box/LRR-repeat protein ( 479) 357 83.2 1.6e-15
XP_016861582 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 348 81.3 4.3e-15
XP_005265073 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 348 81.3 4.3e-15
XP_011531861 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 348 81.3 4.3e-15
XP_016861581 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 348 81.3 4.3e-15
XP_005265072 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 349) 348 81.3 4.3e-15
XP_005265071 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 454) 348 81.3 5.3e-15
XP_011514231 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 783) 351 82.1 5.3e-15
XP_016867340 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 809) 350 81.9 6.3e-15
XP_005265074 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 318) 341 79.8 1.1e-14
XP_016861583 (OMIM: 605652) PREDICTED: F-box/LRR-r ( 318) 341 79.8 1.1e-14
NP_036289 (OMIM: 605652) F-box/LRR-repeat protein ( 423) 341 79.9 1.3e-14
NP_116264 (OMIM: 609086) F-box/LRR-repeat protein ( 436) 319 75.4 3.1e-13
XP_005257803 (OMIM: 609086) PREDICTED: F-box/LRR-r ( 473) 319 75.4 3.3e-13
NP_001165184 (OMIM: 605652) F-box/LRR-repeat prote ( 355) 304 72.3 2.2e-12
XP_011541877 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 618) 283 68.2 6.5e-11
XP_011541876 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 621) 283 68.2 6.5e-11
XP_011541880 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 582) 276 66.8 1.7e-10
XP_011541879 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 589) 276 66.8 1.7e-10
XP_011541878 (OMIM: 609083) PREDICTED: F-box/LRR-r ( 610) 276 66.8 1.7e-10
XP_005270207 (OMIM: 610287) PREDICTED: F-box/LRR-r ( 300) 269 65.1 2.6e-10
XP_005270208 (OMIM: 610287) PREDICTED: F-box/LRR-r ( 300) 269 65.1 2.6e-10
XP_016872120 (OMIM: 610287) PREDICTED: F-box/LRR-r ( 300) 269 65.1 2.6e-10
NP_077302 (OMIM: 610287) F-box/LRR-repeat protein ( 300) 269 65.1 2.6e-10
XP_005270206 (OMIM: 610287) PREDICTED: F-box/LRR-r ( 387) 269 65.2 3.2e-10
XP_011512300 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 444) 251 61.6 4.6e-09
NP_001265246 (OMIM: 605656) F-box/LRR-repeat prote ( 444) 251 61.6 4.6e-09
XP_016864751 (OMIM: 605656) PREDICTED: F-box/LRR-r ( 486) 251 61.6 4.9e-09
NP_036436 (OMIM: 605656) F-box/LRR-repeat protein ( 491) 251 61.6 4.9e-09
XP_011514234 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 639) 240 59.5 2.9e-08
NP_001104508 (OMIM: 609080) F-box/LRR-repeat prote ( 690) 240 59.5 3e-08
NP_001274079 (OMIM: 609080) F-box/LRR-repeat prote ( 707) 240 59.5 3.1e-08
XP_005250265 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 780) 240 59.5 3.4e-08
XP_011514230 (OMIM: 609080) PREDICTED: F-box/LRR-r ( 797) 240 59.5 3.4e-08
>>NP_689654 (OMIM: 609081) F-box/LRR-repeat protein 14 [ (418 aa)
initn: 2764 init1: 2764 opt: 2764 Z-score: 3047.7 bits: 572.9 E(85289): 5.1e-163
Smith-Waterman score: 2764; 100.0% identity (100.0% similar) in 418 aa overlap (1-418:1-418)
10 20 30 40 50 60
pF1KE3 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG
310 320 330 340 350 360
370 380 390 400 410
pF1KE3 IDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_689 IDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR
370 380 390 400 410
>>XP_016874365 (OMIM: 609081) PREDICTED: F-box/LRR-repea (387 aa)
initn: 2673 init1: 2540 opt: 2540 Z-score: 2801.9 bits: 527.3 E(85289): 2.5e-149
Smith-Waterman score: 2540; 99.7% identity (99.7% similar) in 386 aa overlap (1-386:1-386)
10 20 30 40 50 60
pF1KE3 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG
310 320 330 340 350 360
370 380 390 400 410
pF1KE3 IDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR
:::::::::::::::::::::::: :
XP_016 IDLYGCTRITKRGLERITQLPCLKGLL
370 380
>>XP_016874364 (OMIM: 609081) PREDICTED: F-box/LRR-repea (404 aa)
initn: 2539 init1: 2539 opt: 2539 Z-score: 2800.5 bits: 527.1 E(85289): 3e-149
Smith-Waterman score: 2632; 96.7% identity (96.7% similar) in 418 aa overlap (1-418:1-404)
10 20 30 40 50 60
pF1KE3 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 METHISCLFPELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AQGLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTG
310 320 330 340 350 360
370 380 390 400 410
pF1KE3 IDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR
:::::::::::::::::::::::: ::::::::::::::::::::
XP_016 IDLYGCTRITKRGLERITQLPCLK--------------EARGDFSPLFTVRTRGSSRR
370 380 390 400
>>NP_001171835 (OMIM: 609086) F-box/LRR-repeat protein 2 (404 aa)
initn: 379 init1: 183 opt: 465 Z-score: 519.7 bits: 105.1 E(85289): 3.3e-22
Smith-Waterman score: 474; 30.4% identity (58.8% similar) in 391 aa overlap (2-385:21-377)
10 20 30 40
pF1KE3 METHISCLFP-ELLAMIFGYLDVRDKGRAAQVCTAWRDAAY
:. :. .: ::: ::..::: : ::: :: :
NP_001 MRRDVNGVTKSRFEMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLAL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 HKSVWRGVEAKLHLRRANPSLFPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGC
: :. .. . ..: ....: .. .. .: .. ...:.: ::
NP_001 DGSNWQRIDL-FDFQR-------DIEGRVVENIS----KRCGGF-------LRKLSLRGC
70 80 90 100
110 120 130 140 150 160
pF1KE3 YNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTG
.. ::.: ..:.:. ....:::. : . :: :. :: :... :...:. :
NP_001 LGVGDNAL-RTFAQNCRNIEVLNLNGCTKTTD------AEGCPLLEQLNISWCDQVTKDG
110 120 130 140 150
170 180 190 200 210 220
pF1KE3 LLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSL
. .. : ::.: :..: .: : .. .... : : :.:: : ..:: .:
NP_001 IQALVRGCGGLKALFLKGCTQLEDEALKYIGAH-------CPELVTLNLQTCLQITDEGL
160 170 180 190 200
230 240 250 260 270
pF1KE3 KHISRGLTGLRLLNLSFCGGISDAGLLHLSHM-GSLRSLNLRSCDNISDTGIMHLAMGSL
: :: :. : : :..:.:: : :.. :: :.. :....:.:. :: .
NP_001 ITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCH
210 220 230 240 250 260
280 290 300 310 320 330
pF1KE3 RLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCH-ISDDGINRMVRQM--HG-LRTL
.: .:. : .. :..: .. :. ::: :. :.:::: .. : :...
NP_001 ELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVI
270 280 290 300 310 320
340 350 360 370 380 390
pF1KE3 NIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERI-TQLPCLKVLNLGLWQMT
.. .: ::: .:: . . .: :.:: : .::. :..:. :.:: .::
NP_001 ELDNCPLITDASLEHL-KSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAYFAPVTP
330 340 350 360 370 380
400 410
pF1KE3 DSEKEARGDFSPLFTVRTRGSSRR
NP_001 PPSVGGSRQRFCRCCIIL
390 400
>>XP_005257804 (OMIM: 609086) PREDICTED: F-box/LRR-repea (441 aa)
initn: 379 init1: 183 opt: 465 Z-score: 519.1 bits: 105.1 E(85289): 3.5e-22
Smith-Waterman score: 474; 30.4% identity (58.8% similar) in 391 aa overlap (2-385:58-414)
10 20 30
pF1KE3 METHISCLFP-ELLAMIFGYLDVRDKGRAAQ
:. :. .: ::: ::..::: : ::
XP_005 RHIQKRRKMAPSRDRLLHFGFKATMFSNSDEAVINKKLPKELLLRIFSFLDVVTLCRCAQ
30 40 50 60 70 80
40 50 60 70 80 90
pF1KE3 VCTAWRDAAYHKSVWRGVEAKLHLRRANPSLFPSLQARGIRRVQILSLRRSLSYVIQGMA
: :: : : :. .. . ..: ....: .. .. .: ..
XP_005 VSRAWNVLALDGSNWQRIDL-FDFQR-------DIEGRVVENIS----KRCGGF------
90 100 110 120
100 110 120 130 140 150
pF1KE3 NIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLEL
...:.: :: .. ::.: ..:.:. ....:::. : . :: :. :: :..
XP_005 -LRKLSLRGCLGVGDNAL-RTFAQNCRNIEVLNLNGCTKTTD------AEGCPLLEQLNI
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE3 GGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQ
. :...:. :. .. : ::.: :..: .: : .. .... : : :.::
XP_005 SWCDQVTKDGIQALVRGCGGLKALFLKGCTQLEDEALKYIGAH-------CPELVTLNLQ
190 200 210 220 230
220 230 240 250 260
pF1KE3 DCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHM-GSLRSLNLRSCDNISDT
: ..:: .: : :: :. : : :..:.:: : :.. :: :.. :....:.
XP_005 TCLQITDEGLITICRGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDV
240 250 260 270 280 290
270 280 290 300 310 320
pF1KE3 GIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCH-ISDDGINRMVRQ
:. :: . .: .:. : .. :..: .. :. ::: :. :.:::: ..
XP_005 GFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNG
300 310 320 330 340 350
330 340 350 360 370 380
pF1KE3 M--HG-LRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERI-TQLPCLK
: :..... .: ::: .:: . . .: :.:: : .::. :..:. :.:: .:
XP_005 ACAHDQLEVIELDNCPLITDASLEHL-KSCHSLERIELYDCQQITRAGIKRLRTHLPNIK
360 370 380 390 400 410
390 400 410
pF1KE3 VLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR
:
XP_005 VHAYFAPVTPPPSVGGSRQRFCRCCIIL
420 430 440
>>NP_001156787 (OMIM: 609083) F-box/LRR-repeat protein 1 (701 aa)
initn: 599 init1: 206 opt: 381 Z-score: 423.9 bits: 88.2 E(85289): 7.1e-17
Smith-Waterman score: 451; 26.1% identity (59.0% similar) in 376 aa overlap (5-379:321-666)
10 20 30
pF1KE3 METHISCLFPELLAMIFGYLDVRDKGRAAQ-VCT
:. : : .: ::. :.. .. .:. ::
NP_001 QQHECGDADCRESPENPCDCHREPPPETPDINQLPPSILLKIFSNLSLDERCLSASLVCK
300 310 320 330 340 350
40 50 60 70 80 90
pF1KE3 AWRDAAYHKSVWRGVEAKLHLRRANPSLFPSLQARGIRRVQILSLRRSLSYVIQGMANIE
::: . :. .: : : :. . . : . . ::
NP_001 YWRDLCLDFQFWK----QLDLSS---------------RQQVTD--ELLEKIASRSQNII
360 370 380
100 110 120 130 140 150
pF1KE3 SLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLELGGC
.:.: : ...:::. . : :: :::..:.:. .:.. :. ...:.
NP_001 EINISDCRSMSDNGVCVLAFKCPGLLRYTAYR-CKQLSDTSIIAVASHCPLLQKVHVGNQ
390 400 410 420 430 440
160 170 180 190 200 210
pF1KE3 SNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQ
...:. :: .. ..::.... .: ..:: :. .: .::: :... .:. .
NP_001 DKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVIA-------KGCLKLQRIYMQENK
450 460 470 480 490 500
220 230 240 250 260 270
pF1KE3 KLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMH
.:: :.: ... :. ... :. ... :..::... .: ::.:: .... .:.
NP_001 LVTDQSVKAFAEHCPELQYVGFMGCS-VTSKGVIHLTKLRNLSSLDLRHITELDNETVME
510 520 530 540 550 560
280 290 300 310 320 330
pF1KE3 LAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLR
.. ::.:.. . ..:. . ::. ..:: : : ::.:.: .. . : ..
NP_001 IVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSMTIE
570 580 590 600 610 620
340 350 360 370 380 390
pF1KE3 TLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQM
:...: : .:::.: :::. ..: . :. : .... .:...:
NP_001 TVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQLVQQYPHITFSTVLQDC
630 640 650 660 670 680
400 410
pF1KE3 TDSEKEARGDFSPLFTVRTRGSSRR
NP_001 KRTLERAYQMGWTPNMSAASS
690 700
>>XP_005272105 (OMIM: 609083) PREDICTED: F-box/LRR-repea (712 aa)
initn: 528 init1: 205 opt: 368 Z-score: 409.5 bits: 85.5 E(85289): 4.5e-16
Smith-Waterman score: 438; 25.4% identity (59.6% similar) in 366 aa overlap (5-369:321-656)
10 20 30
pF1KE3 METHISCLFPELLAMIFGYLDVRDKGRAAQ-VCT
:. : : .: ::. :.. .. .:. ::
XP_005 QQHECGDADCRESPENPCDCHREPPPETPDINQLPPSILLKIFSNLSLDERCLSASLVCK
300 310 320 330 340 350
40 50 60 70 80 90
pF1KE3 AWRDAAYHKSVWRGVEAKLHLRRANPSLFPSLQARGIRRVQILSLRRSLSYVIQGMANIE
::: . :. .. . . .... :. .. .:. ::
XP_005 YWRDLCLDFQFWKQLDLSSR-QQVTDELLEKIASRS--------------------QNII
360 370 380
100 110 120 130 140 150
pF1KE3 SLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQYLKGLEVLELGGC
.:.: : ...:::. . : :: :::..:.:. .:.. :. ...:.
XP_005 EINISDCRSMSDNGVCVLAFKCPGLLRYTAYR-CKQLSDTSIIAVASHCPLLQKVHVGNQ
390 400 410 420 430 440
160 170 180 190 200 210
pF1KE3 SNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQ
...:. :: .. ..::.... .: ..:: :. . :.::: :... .:. .
XP_005 DKLTDEGLKQLGSKCRELKDIHFGQCYKISDEGMIVI-------AKGCLKLQRIYMQENK
450 460 470 480 490 500
220 230 240 250 260 270
pF1KE3 KLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMH
.:: :.: ... :. ... :. ... :..::... .: ::.:: .... .:.
XP_005 LVTDQSVKAFAEHCPELQYVGFMGCS-VTSKGVIHLTKLRNLSSLDLRHITELDNETVME
510 520 530 540 550 560
280 290 300 310 320 330
pF1KE3 LAMGSLRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCSCHISDDGINRMVRQMHGLR
.. ::.:.. . ..:. . ::. ..:: : : ::.:.: .. . : ..
XP_005 IVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSCKITDYALIAIGRYSMTIE
570 580 590 600 610 620
340 350 360 370 380 390
pF1KE3 TLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQM
:...: : .:::.: :::. ..: . :. : ..
XP_005 TVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVRVDYQVVCFLHISIVNSLMSYPLS
630 640 650 660 670 680
400 410
pF1KE3 TDSEKEARGDFSPLFTVRTRGSSRR
XP_005 FSISTPVYYILYIHFICIYAIIAMHCLPAFVN
690 700 710
>>XP_006715961 (OMIM: 609080) PREDICTED: F-box/LRR-repea (584 aa)
initn: 465 init1: 150 opt: 362 Z-score: 404.2 bits: 84.3 E(85289): 9e-16
Smith-Waterman score: 415; 31.5% identity (64.0% similar) in 292 aa overlap (92-378:251-529)
70 80 90 100 110 120
pF1KE3 FPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFV-QEIGSLR
.... . : .:: .. :. .. .:
XP_006 VEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASF--KFIDKNYPNLS
230 240 250 260 270
130 140 150 160 170
pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGL--LLIAWGLQRLKSLNLRS
. .. :: :::::: : . :: : ::.:..: : . :: .: . . .:.. ::: .
XP_006 HIYMADCKGITDSSL-RSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSN
280 290 300 310 320 330
180 190 200 210 220 230
pF1KE3 CRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFC
: .:::... .:. : : .:. :.:..:..:: .. .: .. . :.....
XP_006 CVRLSDASVMKLS-------ERCPNLNYLSLRNCEHLTAQGIGYI---VNIFSLVSIDLS
340 350 360 370 380
240 250 260 270 280 290
pF1KE3 G-GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSL
: ::. :: ::. .:. :.. : :.: ::. . .:: : ::::.:....:. .
XP_006 GTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMII
390 400 410 420 430 440
300 310 320 330 340 350
pF1KE3 AYIAQGLDGLKSLSLCSC-HISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS
.: .: :::. .: .:.:.... . . : :. :.:. :: .::. :: . .
XP_006 KALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCK
450 460 470 480 490 500
360 370 380 390 400 410
pF1KE3 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSS
:: . . :: :.:.. .:..
XP_006 QLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDNITSSKGA
510 520 530 540 550 560
>--
initn: 261 init1: 117 opt: 237 Z-score: 266.7 bits: 58.8 E(85289): 4.1e-08
Smith-Waterman score: 237; 28.4% identity (59.6% similar) in 183 aa overlap (166-345:68-240)
140 150 160 170 180 190
pF1KE3 GRIAQYLKGLEVLELGGCSNITNTGLLLIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTR
: :. :. ::.:.: : :
XP_006 TQLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLR-LNFRGCL---------LRPKTF
40 50 60 70 80
200 210 220 230 240 250
pF1KE3 SAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSL
.. : .:..:...:: .:: :..:::.: :. :::: . . : :. .:
XP_006 RSVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNL
90 100 110 120 130 140
260 270 280 290 300 310
pF1KE3 RSLNLRSCDNISDTGIMHLAMGS--LRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLC
..:.: : ..: :...: .:. .: ::.: : ... :.. :::.. :. :..
XP_006 QNLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTIN
150 160 170 180 190 200
320 330 340 350 360 370
pF1KE3 SCH-ISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKR
. ..:. .. .:.. . .: . .:.:
XP_006 DMPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASF
210 220 230 240 250 260
380 390 400 410
pF1KE3 GLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR
XP_006 KFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPAS
270 280 290 300 310 320
>>XP_011514232 (OMIM: 609080) PREDICTED: F-box/LRR-repea (735 aa)
initn: 469 init1: 150 opt: 362 Z-score: 402.8 bits: 84.3 E(85289): 1.1e-15
Smith-Waterman score: 415; 31.5% identity (64.0% similar) in 292 aa overlap (92-378:402-680)
70 80 90 100 110 120
pF1KE3 FPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFV-QEIGSLR
.... . : .:: .. :. .. .:
XP_011 VEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASF--KFIDKNYPNLS
380 390 400 410 420
130 140 150 160 170
pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGL--LLIAWGLQRLKSLNLRS
. .. :: :::::: : . :: : ::.:..: : . :: .: . . .:.. ::: .
XP_011 HIYMADCKGITDSSL-RSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSN
430 440 450 460 470 480
180 190 200 210 220 230
pF1KE3 CRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFC
: .:::... .:. : : .:. :.:..:..:: .. .: .. . :.....
XP_011 CVRLSDASVMKLS-------ERCPNLNYLSLRNCEHLTAQGIGYI---VNIFSLVSIDLS
490 500 510 520 530
240 250 260 270 280 290
pF1KE3 G-GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSL
: ::. :: ::. .:. :.. : :.: ::. . .:: : ::::.:....:. .
XP_011 GTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMII
540 550 560 570 580 590
300 310 320 330 340 350
pF1KE3 AYIAQGLDGLKSLSLCSC-HISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS
.: .: :::. .: .:.:.... . . : :. :.:. :: .::. :: . .
XP_011 KALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCK
600 610 620 630 640 650
360 370 380 390 400 410
pF1KE3 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSS
:: . . :: :.:.. .:..
XP_011 QLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDNITSSKGA
660 670 680 690 700 710
>--
initn: 265 init1: 117 opt: 239 Z-score: 267.5 bits: 59.3 E(85289): 3.7e-08
Smith-Waterman score: 239; 25.2% identity (58.3% similar) in 242 aa overlap (111-345:162-391)
90 100 110 120 130 140
pF1KE3 SLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQ
:..: . : .. .: :.. . . .
XP_011 EESNFPERSSSEVFLVDETLKCDISLLPERAILQIFFYLSLKDVIICGQVNHAWM--LMT
140 150 160 170 180
150 160 170 180 190
pF1KE3 YLKGL-EVLELGGCSNITNTGLL---LIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRS
:..: ....... .:. . : : :. :. ::.:.: : :
XP_011 QLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLR-LNFRGCL---------LRPKTFR
190 200 210 220 230
200 210 220 230 240 250
pF1KE3 AAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLR
.. : .:..:...:: .:: :..:::.: :. :::: . . : :. .:.
XP_011 SVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQ
240 250 260 270 280 290
260 270 280 290 300 310
pF1KE3 SLNLRSCDNISDTGIMHLAMGS--LRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCS
.:.: : ..: :...: .:. .: ::.: : ... :.. :::.. :. :.. .
XP_011 NLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTIND
300 310 320 330 340 350
320 330 340 350 360 370
pF1KE3 CH-ISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRG
..:. .. .:.. . .: . .:.:
XP_011 MPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFK
360 370 380 390 400 410
380 390 400 410
pF1KE3 LERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR
XP_011 FIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASM
420 430 440 450 460 470
>>XP_005250266 (OMIM: 609080) PREDICTED: F-box/LRR-repea (735 aa)
initn: 469 init1: 150 opt: 362 Z-score: 402.8 bits: 84.3 E(85289): 1.1e-15
Smith-Waterman score: 415; 31.5% identity (64.0% similar) in 292 aa overlap (92-378:402-680)
70 80 90 100 110 120
pF1KE3 FPSLQARGIRRVQILSLRRSLSYVIQGMANIESLNLSGCYNLTDNGLGHAFV-QEIGSLR
.... . : .:: .. :. .. .:
XP_005 VEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASF--KFIDKNYPNLS
380 390 400 410 420
130 140 150 160 170
pF1KE3 ALNLSLCKQITDSSLGRIAQYLKGLEVLELGGCSNITNTGL--LLIAWGLQRLKSLNLRS
. .. :: :::::: : . :: : ::.:..: : . :: .: . . .:.. ::: .
XP_005 HIYMADCKGITDSSL-RSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASMRIRELNLSN
430 440 450 460 470 480
180 190 200 210 220 230
pF1KE3 CRHLSDVGIGHLAGMTRSAAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFC
: .:::... .:. : : .:. :.:..:..:: .. .: .. . :.....
XP_005 CVRLSDASVMKLS-------ERCPNLNYLSLRNCEHLTAQGIGYI---VNIFSLVSIDLS
490 500 510 520 530
240 250 260 270 280 290
pF1KE3 G-GISDAGLLHLSHMGSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSL
: ::. :: ::. .:. :.. : :.: ::. . .:: : ::::.:....:. .
XP_005 GTDISNEGLNVLSRHKKLKELSVSECYRITDDGIQAFCKSSLILEHLDVSYCSQLSDMII
540 550 560 570 580 590
300 310 320 330 340 350
pF1KE3 AYIAQGLDGLKSLSLCSC-HISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLS
.: .: :::. .: .:.:.... . . : :. :.:. :: .::. :: . .
XP_005 KALAIYCINLTSLSIAGCPKITDSAMEMLSAKCHYLHILDISGCVLLTDQILEDLQIGCK
600 610 620 630 640 650
360 370 380 390 400 410
pF1KE3 QLTGIDLYGCTRITKRGLERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSS
:: . . :: :.:.. .:..
XP_005 QLRILKMQYCTNISKKAAQRMSSKVQQQEYNTNDPPRWFGYDREGNPVTELDNITSSKGA
660 670 680 690 700 710
>--
initn: 265 init1: 117 opt: 239 Z-score: 267.5 bits: 59.3 E(85289): 3.7e-08
Smith-Waterman score: 239; 25.2% identity (58.3% similar) in 242 aa overlap (111-345:162-391)
90 100 110 120 130 140
pF1KE3 SLSYVIQGMANIESLNLSGCYNLTDNGLGHAFVQEIGSLRALNLSLCKQITDSSLGRIAQ
:..: . : .. .: :.. . . .
XP_005 EESNFPERSSSEVFLVDETLKCDISLLPERAILQIFFYLSLKDVIICGQVNHAWM--LMT
140 150 160 170 180
150 160 170 180 190
pF1KE3 YLKGL-EVLELGGCSNITNTGLL---LIAWGLQRLKSLNLRSCRHLSDVGIGHLAGMTRS
:..: ....... .:. . : : :. :. ::.:.: : :
XP_005 QLNSLWNAIDFSSVKNVIPDKYIVSTLQRWRLNVLR-LNFRGCL---------LRPKTFR
190 200 210 220 230
200 210 220 230 240 250
pF1KE3 AAEGCLGLEQLTLQDCQKLTDLSLKHISRGLTGLRLLNLSFCGGISDAGLLHLSHMGSLR
.. : .:..:...:: .:: :..:::.: :. :::: . . : :. .:.
XP_005 SVSHCRNLQELNVSDCPTFTDESMRHISEGCPGVLCLNLSNTTITNRTMRLLPRHFHNLQ
240 250 260 270 280 290
260 270 280 290 300 310
pF1KE3 SLNLRSCDNISDTGIMHLAMGS--LRLSGLDVSFCDKVGDQSLAYIAQGLDGLKSLSLCS
.:.: : ..: :...: .:. .: ::.: : ... :.. :::.. :. :.. .
XP_005 NLSLAYCRRFTDKGLQYLNLGNGCHKLIYLDLSGCTQISVQGFRYIANSCTGIMHLTIND
300 310 320 330 340 350
320 330 340 350 360 370
pF1KE3 CH-ISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLTGIDLYGCTRITKRG
..:. .. .:.. . .: . .:.:
XP_005 MPTLTDNCVKALVEKCSRITSLVFTGAPHISDCTFRALSACKLRKIRFEGNKRVTDASFK
360 370 380 390 400 410
380 390 400 410
pF1KE3 LERITQLPCLKVLNLGLWQMTDSEKEARGDFSPLFTVRTRGSSRR
XP_005 FIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQLTVLNLANCVRIGDMGLKQFLDGPASM
420 430 440 450 460 470
418 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 08:28:20 2016 done: Sun Nov 6 08:28:21 2016
Total Scan time: 7.950 Total Display time: 0.040
Function used was FASTA [36.3.4 Apr, 2011]