Result of FASTA (omim) for
pFN21AE3961
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3961, 208 aa
1>>>pF1KE3961 208 - 208 aa - 208 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3150+/-0.000308; mu= 0.4957+/- 0.019
mean_var=142.9174+/-29.172, 0's: 0 Z-trim(121.0): 23 B-trim: 2040 in 1/55
Lambda= 0.107283
statistics sampled from 36857 (36885) to 36857 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.778), E-opt: 0.2 (0.432), width: 16
Scan time: 6.860
The best scores are: opt bits E(85289)
NP_001229841 (OMIM: 610183) AN1-type zinc finger p ( 208) 1398 226.9 1.9e-59
NP_001229845 (OMIM: 610183) AN1-type zinc finger p ( 208) 1398 226.9 1.9e-59
NP_001229843 (OMIM: 610183) AN1-type zinc finger p ( 208) 1398 226.9 1.9e-59
NP_001229840 (OMIM: 610183) AN1-type zinc finger p ( 208) 1398 226.9 1.9e-59
NP_061879 (OMIM: 610183) AN1-type zinc finger prot ( 208) 1398 226.9 1.9e-59
XP_011519986 (OMIM: 610183) PREDICTED: AN1-type zi ( 208) 1398 226.9 1.9e-59
NP_001229842 (OMIM: 610183) AN1-type zinc finger p ( 208) 1398 226.9 1.9e-59
NP_001229844 (OMIM: 610183) AN1-type zinc finger p ( 208) 1398 226.9 1.9e-59
NP_001229846 (OMIM: 610183) AN1-type zinc finger p ( 196) 969 160.5 1.7e-39
NP_001229847 (OMIM: 610183) AN1-type zinc finger p ( 170) 797 133.8 1.6e-31
NP_001095890 (OMIM: 604761) AN1-type zinc finger p ( 213) 783 131.7 8.6e-31
NP_001265172 (OMIM: 604761) AN1-type zinc finger p ( 213) 783 131.7 8.6e-31
NP_001265174 (OMIM: 604761) AN1-type zinc finger p ( 213) 783 131.7 8.6e-31
NP_001095891 (OMIM: 604761) AN1-type zinc finger p ( 213) 783 131.7 8.6e-31
NP_001265173 (OMIM: 604761) AN1-type zinc finger p ( 213) 783 131.7 8.6e-31
NP_005998 (OMIM: 604761) AN1-type zinc finger prot ( 213) 783 131.7 8.6e-31
NP_001229848 (OMIM: 610183) AN1-type zinc finger p ( 181) 727 123.0 3e-28
XP_005249326 (OMIM: 607455) PREDICTED: AN1-type zi ( 205) 194 40.5 0.0023
XP_016866660 (OMIM: 607455) PREDICTED: AN1-type zi ( 211) 191 40.1 0.0033
NP_068762 (OMIM: 607455) AN1-type zinc finger prot ( 227) 191 40.1 0.0035
>>NP_001229841 (OMIM: 610183) AN1-type zinc finger prote (208 aa)
initn: 1398 init1: 1398 opt: 1398 Z-score: 1188.4 bits: 226.9 E(85289): 1.9e-59
Smith-Waterman score: 1398; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KE3 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
130 140 150 160 170 180
190 200
pF1KE3 CSYNYKADAAEKIRKENPVVVGEKIQKI
::::::::::::::::::::::::::::
NP_001 CSYNYKADAAEKIRKENPVVVGEKIQKI
190 200
>>NP_001229845 (OMIM: 610183) AN1-type zinc finger prote (208 aa)
initn: 1398 init1: 1398 opt: 1398 Z-score: 1188.4 bits: 226.9 E(85289): 1.9e-59
Smith-Waterman score: 1398; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KE3 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
130 140 150 160 170 180
190 200
pF1KE3 CSYNYKADAAEKIRKENPVVVGEKIQKI
::::::::::::::::::::::::::::
NP_001 CSYNYKADAAEKIRKENPVVVGEKIQKI
190 200
>>NP_001229843 (OMIM: 610183) AN1-type zinc finger prote (208 aa)
initn: 1398 init1: 1398 opt: 1398 Z-score: 1188.4 bits: 226.9 E(85289): 1.9e-59
Smith-Waterman score: 1398; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KE3 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
130 140 150 160 170 180
190 200
pF1KE3 CSYNYKADAAEKIRKENPVVVGEKIQKI
::::::::::::::::::::::::::::
NP_001 CSYNYKADAAEKIRKENPVVVGEKIQKI
190 200
>>NP_001229840 (OMIM: 610183) AN1-type zinc finger prote (208 aa)
initn: 1398 init1: 1398 opt: 1398 Z-score: 1188.4 bits: 226.9 E(85289): 1.9e-59
Smith-Waterman score: 1398; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KE3 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
130 140 150 160 170 180
190 200
pF1KE3 CSYNYKADAAEKIRKENPVVVGEKIQKI
::::::::::::::::::::::::::::
NP_001 CSYNYKADAAEKIRKENPVVVGEKIQKI
190 200
>>NP_061879 (OMIM: 610183) AN1-type zinc finger protein (208 aa)
initn: 1398 init1: 1398 opt: 1398 Z-score: 1188.4 bits: 226.9 E(85289): 1.9e-59
Smith-Waterman score: 1398; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KE3 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_061 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
130 140 150 160 170 180
190 200
pF1KE3 CSYNYKADAAEKIRKENPVVVGEKIQKI
::::::::::::::::::::::::::::
NP_061 CSYNYKADAAEKIRKENPVVVGEKIQKI
190 200
>>XP_011519986 (OMIM: 610183) PREDICTED: AN1-type zinc f (208 aa)
initn: 1398 init1: 1398 opt: 1398 Z-score: 1188.4 bits: 226.9 E(85289): 1.9e-59
Smith-Waterman score: 1398; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KE3 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
130 140 150 160 170 180
190 200
pF1KE3 CSYNYKADAAEKIRKENPVVVGEKIQKI
::::::::::::::::::::::::::::
XP_011 CSYNYKADAAEKIRKENPVVVGEKIQKI
190 200
>>NP_001229842 (OMIM: 610183) AN1-type zinc finger prote (208 aa)
initn: 1398 init1: 1398 opt: 1398 Z-score: 1188.4 bits: 226.9 E(85289): 1.9e-59
Smith-Waterman score: 1398; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KE3 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
130 140 150 160 170 180
190 200
pF1KE3 CSYNYKADAAEKIRKENPVVVGEKIQKI
::::::::::::::::::::::::::::
NP_001 CSYNYKADAAEKIRKENPVVVGEKIQKI
190 200
>>NP_001229844 (OMIM: 610183) AN1-type zinc finger prote (208 aa)
initn: 1398 init1: 1398 opt: 1398 Z-score: 1188.4 bits: 226.9 E(85289): 1.9e-59
Smith-Waterman score: 1398; 100.0% identity (100.0% similar) in 208 aa overlap (1-208:1-208)
10 20 30 40 50 60
pF1KE3 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
130 140 150 160 170 180
190 200
pF1KE3 CSYNYKADAAEKIRKENPVVVGEKIQKI
::::::::::::::::::::::::::::
NP_001 CSYNYKADAAEKIRKENPVVVGEKIQKI
190 200
>>NP_001229846 (OMIM: 610183) AN1-type zinc finger prote (196 aa)
initn: 969 init1: 969 opt: 969 Z-score: 830.0 bits: 160.5 E(85289): 1.7e-39
Smith-Waterman score: 1298; 94.2% identity (94.2% similar) in 208 aa overlap (1-208:1-196)
10 20 30 40 50 60
pF1KE3 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
:::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPP---------
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ---VQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
60 70 80 90 100
130 140 150 160 170 180
pF1KE3 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
110 120 130 140 150 160
190 200
pF1KE3 CSYNYKADAAEKIRKENPVVVGEKIQKI
::::::::::::::::::::::::::::
NP_001 CSYNYKADAAEKIRKENPVVVGEKIQKI
170 180 190
>>NP_001229847 (OMIM: 610183) AN1-type zinc finger prote (170 aa)
initn: 1133 init1: 797 opt: 797 Z-score: 687.1 bits: 133.8 E(85289): 1.6e-31
Smith-Waterman score: 1061; 81.7% identity (81.7% similar) in 208 aa overlap (1-208:1-170)
10 20 30 40 50 60
pF1KE3 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QASVSDTAQQPSEEQSKSLEKPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHN
: :::::::::::::::::::::
NP_001 Q--------------------------------------GFECRCGNVYCGVHRYSDVHN
130 140
190 200
pF1KE3 CSYNYKADAAEKIRKENPVVVGEKIQKI
::::::::::::::::::::::::::::
NP_001 CSYNYKADAAEKIRKENPVVVGEKIQKI
150 160 170
208 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 08:32:38 2016 done: Sun Nov 6 08:32:39 2016
Total Scan time: 6.860 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]