Result of FASTA (omim) for
pFN21AE3930
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3930, 401 aa
1>>>pF1KE3930 401 - 401 aa - 401 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 9.1163+/-0.000336; mu= 1.4926+/- 0.021
mean_var=253.0610+/-51.943, 0's: 0 Z-trim(123.8): 15 B-trim: 1071 in 1/55
Lambda= 0.080623
statistics sampled from 44194 (44218) to 44194 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.814), E-opt: 0.2 (0.518), width: 16
Scan time: 9.100
The best scores are: opt bits E(85289)
NP_113618 (OMIM: 607848) rab-interacting lysosomal ( 401) 2665 322.5 1.1e-87
XP_005256868 (OMIM: 607848) PREDICTED: rab-interac ( 373) 2055 251.5 2.4e-66
XP_016880684 (OMIM: 607848) PREDICTED: rab-interac ( 273) 1505 187.5 3.5e-47
XP_011536584 (OMIM: 614092) PREDICTED: RILP-like p ( 343) 400 59.0 2e-08
NP_001306172 (OMIM: 614092) RILP-like protein 1 is ( 386) 395 58.5 3.3e-08
NP_847884 (OMIM: 614092) RILP-like protein 1 isofo ( 403) 395 58.5 3.4e-08
XP_006719435 (OMIM: 614092) PREDICTED: RILP-like p ( 411) 395 58.5 3.4e-08
NP_001306231 (OMIM: 614092) RILP-like protein 1 is ( 252) 373 55.8 1.4e-07
NP_001306173 (OMIM: 614092) RILP-like protein 1 is ( 252) 373 55.8 1.4e-07
XP_011536586 (OMIM: 614092) PREDICTED: RILP-like p ( 257) 373 55.8 1.4e-07
XP_011536587 (OMIM: 614092) PREDICTED: RILP-like p ( 257) 373 55.8 1.4e-07
XP_006719436 (OMIM: 614092) PREDICTED: RILP-like p ( 260) 373 55.8 1.5e-07
>>NP_113618 (OMIM: 607848) rab-interacting lysosomal pro (401 aa)
initn: 2665 init1: 2665 opt: 2665 Z-score: 1695.1 bits: 322.5 E(85289): 1.1e-87
Smith-Waterman score: 2665; 100.0% identity (100.0% similar) in 401 aa overlap (1-401:1-401)
10 20 30 40 50 60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 CRFSREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRKQRKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 CRFSREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRKQRKK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
310 320 330 340 350 360
370 380 390 400
pF1KE3 SPAPSKLGGEEEAQPQSPAPDPPCSALHEHLCLGASAAPEA
:::::::::::::::::::::::::::::::::::::::::
NP_113 SPAPSKLGGEEEAQPQSPAPDPPCSALHEHLCLGASAAPEA
370 380 390 400
>>XP_005256868 (OMIM: 607848) PREDICTED: rab-interacting (373 aa)
initn: 2048 init1: 2048 opt: 2055 Z-score: 1312.1 bits: 251.5 E(85289): 2.4e-66
Smith-Waterman score: 2391; 93.0% identity (93.0% similar) in 401 aa overlap (1-401:1-373)
10 20 30 40 50 60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQ
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 CRFSREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRKQRKK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CRFSREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRKQRKK
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
::::::::::::::: :::::::::::::::::
XP_005 IKAKMLGTPEEAESS----------------------------FGLWYRGKAESSEDETS
310 320 330
370 380 390 400
pF1KE3 SPAPSKLGGEEEAQPQSPAPDPPCSALHEHLCLGASAAPEA
:::::::::::::::::::::::::::::::::::::::::
XP_005 SPAPSKLGGEEEAQPQSPAPDPPCSALHEHLCLGASAAPEA
340 350 360 370
>>XP_016880684 (OMIM: 607848) PREDICTED: rab-interacting (273 aa)
initn: 1550 init1: 1485 opt: 1505 Z-score: 968.1 bits: 187.5 E(85289): 3.5e-47
Smith-Waterman score: 1505; 93.2% identity (94.8% similar) in 251 aa overlap (1-247:1-251)
10 20 30 40 50 60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
130 140 150 160 170 180
190 200 210 220 230
pF1KE3 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLG-RPSEAG
:::::::::::::::::::::::::::::::::::::::::::::. : . : ::: :
XP_016 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPGAAHRPPGPRPSARG
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE3 Q---CRFSREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRK
. : . ::
XP_016 HEGGCPEAAEEDQGQDVRDTRGSREQLWPMVSG
250 260 270
>>XP_011536584 (OMIM: 614092) PREDICTED: RILP-like prote (343 aa)
initn: 360 init1: 206 opt: 400 Z-score: 272.2 bits: 59.0 E(85289): 2e-08
Smith-Waterman score: 400; 34.1% identity (64.3% similar) in 252 aa overlap (48-283:23-267)
20 30 40 50 60 70
pF1KE3 AAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVRALELLEQAAVGPAPDSL
:. . :: . :::.:.. : : : :
XP_011 MERYLDQIPKERWGRGPRLPRHPQDSRGLWLPWRKELELVEDVWRGEAQDLL
10 20 30 40 50
80 90 100 110 120 130
pF1KE3 QVSAQPAE---QELRRLREENERLRREL---RAGPQE-ERALLRQLKEVTDRQRDELRAH
. :: : : . : ... . .: . : .: :: ....::::.:.::::.::.
XP_011 SQIAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRAK
60 70 80 90 100 110
140 150 160 170 180
pF1KE3 NRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQP
.:.: .....::::.: ::. .: .:::.......: .: : . ..:.
XP_011 DRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEM
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 GEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQCR
: . .: : : : :. ... .::: .: . .. : : .. .:: :
XP_011 GSLRAELGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------R
180 190 200 210 220
250 260 270 280 290 300
pF1KE3 FSREEFEQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKKI
:. .:....:.::::::.:::::.:::::.. .:. ..:.:
XP_011 FTLQELRDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESGI
230 240 250 260 270 280
310 320 330 340 350 360
pF1KE3 KAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETSS
XP_011 KRLKEGPLSDGFSFFSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL
290 300 310 320 330 340
>>NP_001306172 (OMIM: 614092) RILP-like protein 1 isofor (386 aa)
initn: 513 init1: 206 opt: 395 Z-score: 268.4 bits: 58.5 E(85289): 3.3e-08
Smith-Waterman score: 401; 31.3% identity (58.2% similar) in 316 aa overlap (28-283:27-335)
10 20 30 40 50 60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
:: .:. .: :.. . . : :: : :.: :::
NP_001 MEEERGSALAAESALEKNVAELTVMDVYDIASLVGHEFERVIDQHGCEAIARLMPKVVR
10 20 30 40 50
70 80
pF1KE3 ALELLE----QAAVGPAPDSLQVS--------------------------------AQPA
.::.:: . :.: : :.. ::
NP_001 VLEILEVLVSRHHVAPELDELRLELDRLRLERMDRIEKERKHQKELELVEDVWRGEAQDL
60 70 80 90 100 110
90 100 110 120
pF1KE3 EQELRRLREENERLRREL--------------RAGPQE-ERALLRQLKEVTDRQRDELRA
... .:.:::..: .: . : .: :: ....::::.:.::::.::
NP_001 LSQIAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRA
120 130 140 150 160 170
130 140 150 160 170 180
pF1KE3 HNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQ
..:.: .....::::.: ::. .: .:::.......: .: : . ..:.
NP_001 KDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQE
180 190 200 210 220 230
190 200 210 220 230 240
pF1KE3 PGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQC
: . .: : : : :. ... .::: .: . .. : : .. .::
NP_001 MGSLRAELGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------
240 250 260 270 280 290
250 260 270 280 290 300
pF1KE3 RFSREEFEQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKK
::. .:....:.::::::.:::::.:::::.. .:. ..:.:
NP_001 RFTLQELRDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESG
300 310 320 330 340 350
310 320 330 340 350 360
pF1KE3 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
NP_001 IKRLIFTAIMPMVAAGLIIDDPTLQPVRRLVSLV
360 370 380
>>NP_847884 (OMIM: 614092) RILP-like protein 1 isoform 1 (403 aa)
initn: 513 init1: 206 opt: 395 Z-score: 268.1 bits: 58.5 E(85289): 3.4e-08
Smith-Waterman score: 401; 31.3% identity (58.2% similar) in 316 aa overlap (28-283:27-335)
10 20 30 40 50 60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
:: .:. .: :.. . . : :: : :.: :::
NP_847 MEEERGSALAAESALEKNVAELTVMDVYDIASLVGHEFERVIDQHGCEAIARLMPKVVR
10 20 30 40 50
70 80
pF1KE3 ALELLE----QAAVGPAPDSLQVS--------------------------------AQPA
.::.:: . :.: : :.. ::
NP_847 VLEILEVLVSRHHVAPELDELRLELDRLRLERMDRIEKERKHQKELELVEDVWRGEAQDL
60 70 80 90 100 110
90 100 110 120
pF1KE3 EQELRRLREENERLRREL--------------RAGPQE-ERALLRQLKEVTDRQRDELRA
... .:.:::..: .: . : .: :: ....::::.:.::::.::
NP_847 LSQIAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRA
120 130 140 150 160 170
130 140 150 160 170 180
pF1KE3 HNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQ
..:.: .....::::.: ::. .: .:::.......: .: : . ..:.
NP_847 KDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQE
180 190 200 210 220 230
190 200 210 220 230 240
pF1KE3 PGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQC
: . .: : : : :. ... .::: .: . .. : : .. .::
NP_847 MGSLRAELGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------
240 250 260 270 280 290
250 260 270 280 290 300
pF1KE3 RFSREEFEQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKK
::. .:....:.::::::.:::::.:::::.. .:. ..:.:
NP_847 RFTLQELRDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESG
300 310 320 330 340 350
310 320 330 340 350 360
pF1KE3 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
NP_847 IKRLFSFFSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL
360 370 380 390 400
>>XP_006719435 (OMIM: 614092) PREDICTED: RILP-like prote (411 aa)
initn: 513 init1: 206 opt: 395 Z-score: 268.0 bits: 58.5 E(85289): 3.4e-08
Smith-Waterman score: 401; 31.3% identity (58.2% similar) in 316 aa overlap (28-283:27-335)
10 20 30 40 50 60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
:: .:. .: :.. . . : :: : :.: :::
XP_006 MEEERGSALAAESALEKNVAELTVMDVYDIASLVGHEFERVIDQHGCEAIARLMPKVVR
10 20 30 40 50
70 80
pF1KE3 ALELLE----QAAVGPAPDSLQVS--------------------------------AQPA
.::.:: . :.: : :.. ::
XP_006 VLEILEVLVSRHHVAPELDELRLELDRLRLERMDRIEKERKHQKELELVEDVWRGEAQDL
60 70 80 90 100 110
90 100 110 120
pF1KE3 EQELRRLREENERLRREL--------------RAGPQE-ERALLRQLKEVTDRQRDELRA
... .:.:::..: .: . : .: :: ....::::.:.::::.::
XP_006 LSQIAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRA
120 130 140 150 160 170
130 140 150 160 170 180
pF1KE3 HNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQ
..:.: .....::::.: ::. .: .:::.......: .: : . ..:.
XP_006 KDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQE
180 190 200 210 220 230
190 200 210 220 230 240
pF1KE3 PGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQC
: . .: : : : :. ... .::: .: . .. : : .. .::
XP_006 MGSLRAELGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------
240 250 260 270 280 290
250 260 270 280 290 300
pF1KE3 RFSREEFEQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKK
::. .:....:.::::::.:::::.:::::.. .:. ..:.:
XP_006 RFTLQELRDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESG
300 310 320 330 340 350
310 320 330 340 350 360
pF1KE3 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
XP_006 IKRLKEGPLSDGFSFFSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL
360 370 380 390 400 410
>>NP_001306231 (OMIM: 614092) RILP-like protein 1 isofor (252 aa)
initn: 360 init1: 206 opt: 373 Z-score: 257.0 bits: 55.8 E(85289): 1.4e-07
Smith-Waterman score: 373; 36.0% identity (69.9% similar) in 186 aa overlap (107-283:6-184)
80 90 100 110 120 130
pF1KE3 LQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQ
..:: ....::::.:.::::.::..:.:
NP_001 MTGMSERERQVMKKLKEVVDKQRDEIRAKDRELGL
10 20 30
140 150 160 170 180
pF1KE3 RGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQPGEAATP
.....::::.: ::. .: .:::.......: .: : . ..:. : .
NP_001 KNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGSLRAE
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE3 QAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQCRFSREEF
.: : : : :. ... .::: .: . .. : : .. .:: ::. .:.
NP_001 LGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------RFTLQEL
100 110 120 130 140
250 260 270 280 290 300
pF1KE3 EQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKKIKAKMLG
...:.::::::.:::::.:::::.. .:. ..:.:
NP_001 RDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESGIKRLFSF
150 160 170 180 190 200
310 320 330 340 350 360
pF1KE3 TPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETSSPAPSKL
NP_001 FSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL
210 220 230 240 250
>>NP_001306173 (OMIM: 614092) RILP-like protein 1 isofor (252 aa)
initn: 360 init1: 206 opt: 373 Z-score: 257.0 bits: 55.8 E(85289): 1.4e-07
Smith-Waterman score: 373; 36.0% identity (69.9% similar) in 186 aa overlap (107-283:6-184)
80 90 100 110 120 130
pF1KE3 LQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQ
..:: ....::::.:.::::.::..:.:
NP_001 MTGMSERERQVMKKLKEVVDKQRDEIRAKDRELGL
10 20 30
140 150 160 170 180
pF1KE3 RGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQPGEAATP
.....::::.: ::. .: .:::.......: .: : . ..:. : .
NP_001 KNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGSLRAE
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE3 QAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQCRFSREEF
.: : : : :. ... .::: .: . .. : : .. .:: ::. .:.
NP_001 LGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------RFTLQEL
100 110 120 130 140
250 260 270 280 290 300
pF1KE3 EQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKKIKAKMLG
...:.::::::.:::::.:::::.. .:. ..:.:
NP_001 RDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESGIKRLFSF
150 160 170 180 190 200
310 320 330 340 350 360
pF1KE3 TPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETSSPAPSKL
NP_001 FSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL
210 220 230 240 250
>>XP_011536586 (OMIM: 614092) PREDICTED: RILP-like prote (257 aa)
initn: 360 init1: 206 opt: 373 Z-score: 256.9 bits: 55.8 E(85289): 1.4e-07
Smith-Waterman score: 373; 36.0% identity (69.9% similar) in 186 aa overlap (107-283:3-181)
80 90 100 110 120 130
pF1KE3 LQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQ
..:: ....::::.:.::::.::..:.:
XP_011 MSERERQVMKKLKEVVDKQRDEIRAKDRELGL
10 20 30
140 150 160 170 180
pF1KE3 RGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQPGEAATP
.....::::.: ::. .: .:::.......: .: : . ..:. : .
XP_011 KNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGSLRAE
40 50 60 70 80 90
190 200 210 220 230 240
pF1KE3 QAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQCRFSREEF
.: : : : :. ... .::: .: . .. : : .. .:: ::. .:.
XP_011 LGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------RFTLQEL
100 110 120 130 140
250 260 270 280 290 300
pF1KE3 EQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKKIKAKMLG
...:.::::::.:::::.:::::.. .:. ..:.:
XP_011 RDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESGIKRLKEG
150 160 170 180 190 200
310 320 330 340 350 360
pF1KE3 TPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETSSPAPSKL
XP_011 PLSDGFSFFSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL
210 220 230 240 250
401 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 08:50:25 2016 done: Sun Nov 6 08:50:26 2016
Total Scan time: 9.100 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]