Result of FASTA (ccds) for
pFN21AE3893
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3893, 108 aa
1>>>pF1KE3893 108 - 108 aa - 108 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1741+/-0.000556; mu= 10.1948+/- 0.034
mean_var=53.6265+/-10.840, 0's: 0 Z-trim(111.6): 27 B-trim: 261 in 1/50
Lambda= 0.175140
statistics sampled from 12663 (12690) to 12663 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.783), E-opt: 0.2 (0.38), width: 16
Scan time: 0.820
The best scores are: opt bits E(33420)
CCDS1706.1 FKBP1B gene_id:2281|Hs109|chr2 ( 108) 729 191.2 1.1e-49
CCDS13014.1 FKBP1A gene_id:2280|Hs109|chr20 ( 108) 641 169.0 5.2e-43
CCDS82423.1 FKBP1B gene_id:2281|Hs109|chr2 ( 79) 527 140.2 1.8e-34
CCDS33153.1 FKBP1B gene_id:2281|Hs109|chr2 ( 80) 455 122.0 5.6e-29
CCDS54996.1 FKBP5 gene_id:2289|Hs109|chr6 ( 268) 325 89.3 1.3e-18
CCDS4808.1 FKBP5 gene_id:2289|Hs109|chr6 ( 457) 325 89.4 2.1e-18
CCDS8512.1 FKBP4 gene_id:2288|Hs109|chr12 ( 459) 322 88.6 3.5e-18
CCDS9683.1 FKBP3 gene_id:2287|Hs109|chr14 ( 224) 277 77.1 4.9e-15
CCDS8063.1 FKBP2 gene_id:2286|Hs109|chr11 ( 142) 272 75.8 7.8e-15
CCDS11409.1 FKBP10 gene_id:60681|Hs109|chr17 ( 582) 246 69.4 2.6e-12
CCDS46462.1 FKBP7 gene_id:51661|Hs109|chr2 ( 221) 235 66.5 7.6e-12
CCDS5439.1 FKBP9 gene_id:11328|Hs109|chr7 ( 570) 239 67.7 8.8e-12
CCDS2280.1 FKBP7 gene_id:51661|Hs109|chr2 ( 222) 223 63.5 6.2e-11
>>CCDS1706.1 FKBP1B gene_id:2281|Hs109|chr2 (108 aa)
initn: 729 init1: 729 opt: 729 Z-score: 1006.0 bits: 191.2 E(33420): 1.1e-49
Smith-Waterman score: 729; 100.0% identity (100.0% similar) in 108 aa overlap (1-108:1-108)
10 20 30 40 50 60
pF1KE3 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGF
10 20 30 40 50 60
70 80 90 100
pF1KE3 EEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS17 EEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
70 80 90 100
>>CCDS13014.1 FKBP1A gene_id:2280|Hs109|chr20 (108 aa)
initn: 641 init1: 641 opt: 641 Z-score: 885.9 bits: 169.0 E(33420): 5.2e-43
Smith-Waterman score: 641; 83.3% identity (97.2% similar) in 108 aa overlap (1-108:1-108)
10 20 30 40 50 60
pF1KE3 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGF
:::..:::::::::::::.::::::::::::..:::::::::::::::: .::::::.:.
CCDS13 MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGW
10 20 30 40 50 60
70 80 90 100
pF1KE3 EEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
:::.::::.::::::: .:: :::::::::.:::.:::.::::::.::
CCDS13 EEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
70 80 90 100
>>CCDS82423.1 FKBP1B gene_id:2281|Hs109|chr2 (79 aa)
initn: 527 init1: 527 opt: 527 Z-score: 732.4 bits: 140.2 E(33420): 1.8e-34
Smith-Waterman score: 527; 100.0% identity (100.0% similar) in 79 aa overlap (30-108:1-79)
10 20 30 40 50 60
pF1KE3 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGF
:::::::::::::::::::::::::::::::
CCDS82 MLQNGKKFDSSRDRNKPFKFRIGKQEVIKGF
10 20 30
70 80 90 100
pF1KE3 EEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 EEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
40 50 60 70
>>CCDS33153.1 FKBP1B gene_id:2281|Hs109|chr2 (80 aa)
initn: 452 init1: 452 opt: 455 Z-score: 634.0 bits: 122.0 E(33420): 5.6e-29
Smith-Waterman score: 455; 88.6% identity (89.9% similar) in 79 aa overlap (1-79:1-77)
10 20 30 40 50 60
pF1KE3 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGF
10 20 30 40 50 60
70 80 90 100
pF1KE3 EEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
:::::: :: . : :
CCDS33 EEGAAQ--LGPLSPLPICPHPC
70 80
>>CCDS54996.1 FKBP5 gene_id:2289|Hs109|chr6 (268 aa)
initn: 345 init1: 325 opt: 325 Z-score: 447.9 bits: 89.3 E(33420): 1.3e-18
Smith-Waterman score: 325; 50.0% identity (74.5% similar) in 98 aa overlap (11-108:41-138)
10 20 30 40
pF1KE3 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSS
:.:. : :. ::: : :.::::::::
CCDS54 EESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSS
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE3 RDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIF
.:::.:: : .:: .:::... :.: :. :. .: : :. :::..: :: ::::.:
CCDS54 HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFF
80 90 100 110 120 130
pF1KE3 DVELLNLE
..:::...
CCDS54 EIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTV
140 150 160 170 180 190
>>CCDS4808.1 FKBP5 gene_id:2289|Hs109|chr6 (457 aa)
initn: 362 init1: 325 opt: 325 Z-score: 444.2 bits: 89.4 E(33420): 2.1e-18
Smith-Waterman score: 325; 50.0% identity (74.5% similar) in 98 aa overlap (11-108:41-138)
10 20 30 40
pF1KE3 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSS
:.:. : :. ::: : :.::::::::
CCDS48 EESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSS
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE3 RDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIF
.:::.:: : .:: .:::... :.: :. :. .: : :. :::..: :: ::::.:
CCDS48 HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFF
80 90 100 110 120 130
pF1KE3 DVELLNLE
..:::...
CCDS48 EIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTV
140 150 160 170 180 190
>>CCDS8512.1 FKBP4 gene_id:2288|Hs109|chr12 (459 aa)
initn: 363 init1: 322 opt: 322 Z-score: 440.0 bits: 88.6 E(33420): 3.5e-18
Smith-Waterman score: 322; 49.0% identity (73.5% similar) in 98 aa overlap (11-108:41-138)
10 20 30 40
pF1KE3 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSS
: : .: :. ::::: : .: :::::
CCDS85 SGAQSAPLPMEGVDISPKQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSS
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE3 RDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIF
::. :.: .:: ::::... . : :..:. ..:: :. :::..: : :::::::.:
CCDS85 LDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVF
80 90 100 110 120 130
pF1KE3 DVELLNLE
.:::....
CCDS85 EVELFEFKGEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRF
140 150 160 170 180 190
>>CCDS9683.1 FKBP3 gene_id:2287|Hs109|chr14 (224 aa)
initn: 297 init1: 139 opt: 277 Z-score: 383.7 bits: 77.1 E(33420): 4.9e-15
Smith-Waterman score: 278; 43.2% identity (69.4% similar) in 111 aa overlap (8-108:116-224)
10 20 30
pF1KE3 MGVEIETISPGDGRTFPKKGQTCVVH--YTGMLQNGK
.. :: .:::::. ::: ::: ::.:
CCDS96 KNVKLNEDKPKETKSEETLDEGPPKYTKSVLKKGDKTNFPKKGD--VVHCWYTGTLQDGT
90 100 110 120 130 140
40 50 60 70 80
pF1KE3 KFDSS------RDRN-KPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGH
::.. . .: ::..:..: .::.:..:. :: :..:.: :. ::: :.
CCDS96 VFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQ
150 160 170 180 190 200
90 100
pF1KE3 PGV-IPPNATLIFDVELLNLE
: . ::::: : :.:::....
CCDS96 PDAKIPPNAKLTFEVELVDID
210 220
>>CCDS8063.1 FKBP2 gene_id:2286|Hs109|chr11 (142 aa)
initn: 282 init1: 269 opt: 272 Z-score: 380.0 bits: 75.8 E(33420): 7.8e-15
Smith-Waterman score: 272; 45.1% identity (72.5% similar) in 91 aa overlap (18-108:47-137)
10 20 30 40
pF1KE3 MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPF
.::.. .:::: :..: .:::: .:.::
CCDS80 SAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPF
20 30 40 50 60 70
50 60 70 80 90 100
pF1KE3 KFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNL
: .: .::::...: : :.. ::. ...:: : : :: .:::.:.::::..
CCDS80 VFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKI
80 90 100 110 120 130
pF1KE3 E
:
CCDS80 ERRTEL
140
>>CCDS11409.1 FKBP10 gene_id:60681|Hs109|chr17 (582 aa)
initn: 634 init1: 242 opt: 246 Z-score: 334.6 bits: 69.4 E(33420): 2.6e-12
Smith-Waterman score: 246; 40.2% identity (67.0% similar) in 97 aa overlap (14-107:53-149)
10 20 30 40
pF1KE3 MGVEIETISPGDGRTFPKK---GQTCVVHYTGMLQNGKKFDSS
:. :.. :. ::.: ...:::::::
CCDS11 VVQAVGRGLGRASPAGGPLEDVVIERYHIPRACPREVQMGDFVRYHYNGTFEDGKKFDSS
30 40 50 60 70 80
50 60 70 80 90 100
pF1KE3 RDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIF
::: . .: ..: :...: : ...: .: : ..::. : :.:::.::: :
CCDS11 YDRNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGLAGLIPPDATLYF
90 100 110 120 130 140
pF1KE3 DVELLNLE
:: ::..
CCDS11 DVVLLDVWNKEDTVQVSTLLRPPHCPRMVQDGDFVRYHYNGTLLDGTSFDTSYSKGGTYD
150 160 170 180 190 200
108 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Aug 4 20:43:44 2021 done: Wed Aug 4 20:43:44 2021
Total Scan time: 0.820 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]