Result of FASTA (ccds) for
pFN21AE3879
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3879, 976 aa
1>>>pF1KE3879 976 - 976 aa - 976 aa
Library: human.CCDS.faa
18921897 residues in 33420 sequences
Statistics: Expectation_n fit: rho(ln(x))= 14.7931+/-0.00183; mu= -22.9352+/- 0.107
mean_var=554.6399+/-120.961, 0's: 0 Z-trim(106.7): 223 B-trim: 461 in 1/51
Lambda= 0.054459
statistics sampled from 9105 (9279) to 9105 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.589), E-opt: 0.2 (0.278), width: 16
Scan time: 2.320
The best scores are: opt bits E(33420)
CCDS879.1 SYCP1 gene_id:6847|Hs109|chr1 ( 976) 6102 495.8 1.8e-139
CCDS72840.1 SYCP1 gene_id:6847|Hs109|chr1 ( 951) 4685 384.4 5.9e-106
>>CCDS879.1 SYCP1 gene_id:6847|Hs109|chr1 (976 aa)
initn: 6102 init1: 6102 opt: 6102 Z-score: 2617.5 bits: 495.8 E(33420): 1.8e-139
Smith-Waterman score: 6102; 100.0% identity (100.0% similar) in 976 aa overlap (1-976:1-976)
10 20 30 40 50 60
pF1KE3 MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 NIDSDPALQKVNFLPVLEQVGNSDCHYQEGLKDSDLENSEGLSRVYSKLYKEAEKIKKWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 NIDSDPALQKVNFLPVLEQVGNSDCHYQEGLKDSDLENSEGLSRVYSKLYKEAEKIKKWK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 VSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 VSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 HLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 HLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 FKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 FKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 EKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 EKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 TQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 TQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 EMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 EMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 LEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 LEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 LKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 LKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 TDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 TDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 YDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 YDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKRE
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 AKENTATLKEKKDKKTQTFLLETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 AKENTATLKEKKDKKTQTFLLETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLW
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 TSAKNTLSTPLPKAYTVKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 TSAKNTLSTPLPKAYTVKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDL
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE3 LSMVSEEETLKTLYRNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS87 LSMVSEEETLKTLYRNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIA
910 920 930 940 950 960
970
pF1KE3 KMDRKKKLKEAEKLFV
::::::::::::::::
CCDS87 KMDRKKKLKEAEKLFV
970
>>CCDS72840.1 SYCP1 gene_id:6847|Hs109|chr1 (951 aa)
initn: 4677 init1: 4677 opt: 4685 Z-score: 2016.0 bits: 384.4 E(33420): 5.9e-106
Smith-Waterman score: 5900; 97.4% identity (97.4% similar) in 976 aa overlap (1-976:1-951)
10 20 30 40 50 60
pF1KE3 MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 NIDSDPALQKVNFLPVLEQVGNSDCHYQEGLKDSDLENSEGLSRVYSKLYKEAEKIKKWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 NIDSDPALQKVNFLPVLEQVGNSDCHYQEGLKDSDLENSEGLSRVYSKLYKEAEKIKKWK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 VSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 VSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSLKLEEGIQENKDLIKENNATR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 HLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 HLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMH
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 FKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 FKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 EKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 EKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 TQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 TQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 EMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 EMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHD
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 LEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLE
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 LKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEI
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 TDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 TDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQ
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 YDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKRE
:::::::::::::::::::::::::::::: :::::
CCDS72 YDKIIEERDSELGLYKSKEQEQSSLRASLE-------------------------KLKRE
730 740 750
790 800 810 820 830 840
pF1KE3 AKENTATLKEKKDKKTQTFLLETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 AKENTATLKEKKDKKTQTFLLETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLW
760 770 780 790 800 810
850 860 870 880 890 900
pF1KE3 TSAKNTLSTPLPKAYTVKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 TSAKNTLSTPLPKAYTVKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDL
820 830 840 850 860 870
910 920 930 940 950 960
pF1KE3 LSMVSEEETLKTLYRNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS72 LSMVSEEETLKTLYRNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIA
880 890 900 910 920 930
970
pF1KE3 KMDRKKKLKEAEKLFV
::::::::::::::::
CCDS72 KMDRKKKLKEAEKLFV
940 950
976 residues in 1 query sequences
18921897 residues in 33420 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Wed Aug 4 20:36:48 2021 done: Wed Aug 4 20:36:48 2021
Total Scan time: 2.320 Total Display time: 0.060
Function used was FASTA [36.3.4 Apr, 2011]