FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3802, 74 aa
  1>>>pF1KE3802 74 - 74 aa - 74 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9373+/-0.00046; mu= 9.2351+/- 0.028
 mean_var=53.9328+/-10.475, 0's: 0 Z-trim(114.8): 4  B-trim: 2 in 1/53
 Lambda= 0.174642
 statistics sampled from 15403 (15404) to 15403 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.849), E-opt: 0.2 (0.473), width:  16
 Scan time:  1.240

The best scores are:                                      opt bits E(32554)
CCDS3085.1 ANAPC13 gene_id:25847|Hs108|chr3        (  74)  509 134.9 4.4e-33


>>CCDS3085.1 ANAPC13 gene_id:25847|Hs108|chr3             (74 aa)
 initn: 509 init1: 509 opt: 509  Z-score: 707.4  bits: 134.9 E(32554): 4.4e-33
Smith-Waterman score: 509; 100.0% identity (100.0% similar) in 74 aa overlap (1-74:1-74)

               10        20        30        40        50        60
pF1KE3 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS30 MDSEVQRDGRILDLIDDAWREDKLPYEDVAIPLNELPEPEQDNGGTTESVKEQEMKWTDL
               10        20        30        40        50        60

               70    
pF1KE3 ALQYLHENVPPIGN
       ::::::::::::::
CCDS30 ALQYLHENVPPIGN
               70    




74 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 06:40:58 2016 done: Sun Nov  6 06:40:58 2016
 Total Scan time:  1.240 Total Display time: -0.040

Function used was FASTA [36.3.4 Apr, 2011]