Result of FASTA (omim) for
pFN21AE3762
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3762, 567 aa
1>>>pF1KE3762 567 - 567 aa - 567 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.9043+/-0.000348; mu= -6.7909+/- 0.022
mean_var=302.5487+/-63.635, 0's: 0 Z-trim(124.2): 45 B-trim: 2100 in 1/57
Lambda= 0.073735
statistics sampled from 45319 (45375) to 45319 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.816), E-opt: 0.2 (0.532), width: 16
Scan time: 13.700
The best scores are: opt bits E(85289)
NP_077084 (OMIM: 602881) PHD finger protein 1 isof ( 567) 4048 444.0 5.9e-124
XP_011512964 (OMIM: 602881) PREDICTED: PHD finger ( 567) 4045 443.7 7.4e-124
XP_011512965 (OMIM: 602881) PREDICTED: PHD finger ( 566) 4028 441.9 2.6e-123
XP_011512968 (OMIM: 602881) PREDICTED: PHD finger ( 498) 2987 331.1 5.1e-90
XP_011512967 (OMIM: 602881) PREDICTED: PHD finger ( 499) 2986 331.0 5.5e-90
NP_002627 (OMIM: 602881) PHD finger protein 1 isof ( 457) 2546 284.2 6.3e-76
XP_011512972 (OMIM: 602881) PREDICTED: PHD finger ( 415) 2543 283.8 7.2e-76
XP_011512971 (OMIM: 602881) PREDICTED: PHD finger ( 429) 2521 281.5 3.8e-75
XP_011512966 (OMIM: 602881) PREDICTED: PHD finger ( 535) 2376 266.1 2e-70
XP_016866428 (OMIM: 602881) PREDICTED: PHD finger ( 334) 1503 173.1 1.2e-42
XP_016870101 (OMIM: 609740) PREDICTED: PHD finger ( 580) 1409 163.3 2e-39
NP_056466 (OMIM: 609740) PHD finger protein 19 iso ( 580) 1409 163.3 2e-39
XP_011516811 (OMIM: 609740) PREDICTED: PHD finger ( 580) 1409 163.3 2e-39
XP_005251963 (OMIM: 609740) PREDICTED: PHD finger ( 580) 1409 163.3 2e-39
NP_001273769 (OMIM: 609740) PHD finger protein 19 ( 599) 1409 163.3 2e-39
NP_031384 (OMIM: 609882) metal-response element-bi ( 593) 1355 157.6 1.1e-37
XP_011516817 (OMIM: 609740) PREDICTED: PHD finger ( 422) 1309 152.6 2.4e-36
XP_011516813 (OMIM: 609740) PREDICTED: PHD finger ( 473) 1309 152.6 2.6e-36
XP_011516818 (OMIM: 609740) PREDICTED: PHD finger ( 388) 1300 151.6 4.4e-36
XP_016870102 (OMIM: 609740) PREDICTED: PHD finger ( 443) 1300 151.6 4.9e-36
NP_001157864 (OMIM: 609882) metal-response element ( 536) 1239 145.2 5.1e-34
XP_011539319 (OMIM: 609882) PREDICTED: metal-respo ( 331) 1147 135.3 3.1e-31
NP_001157865 (OMIM: 609882) metal-response element ( 491) 1126 133.1 2e-30
NP_001157863 (OMIM: 609882) metal-response element ( 491) 1126 133.1 2e-30
XP_016856165 (OMIM: 609882) PREDICTED: metal-respo ( 491) 1126 133.1 2e-30
XP_011539318 (OMIM: 609882) PREDICTED: metal-respo ( 491) 1126 133.1 2e-30
XP_016856166 (OMIM: 609882) PREDICTED: metal-respo ( 434) 1010 120.8 9.3e-27
XP_016856167 (OMIM: 609882) PREDICTED: metal-respo ( 434) 1010 120.8 9.3e-27
NP_001273771 (OMIM: 609740) PHD finger protein 19 ( 371) 729 90.8 8.1e-18
NP_001009936 (OMIM: 609740) PHD finger protein 19 ( 207) 448 60.8 5.1e-09
NP_001273772 (OMIM: 609740) PHD finger protein 19 ( 130) 322 47.2 3.8e-05
>>NP_077084 (OMIM: 602881) PHD finger protein 1 isoform (567 aa)
initn: 4048 init1: 4048 opt: 4048 Z-score: 2346.3 bits: 444.0 E(85289): 5.9e-124
Smith-Waterman score: 4048; 100.0% identity (100.0% similar) in 567 aa overlap (1-567:1-567)
10 20 30 40 50 60
pF1KE3 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSGPPDRSPLELHIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSGPPDRSPLELHIG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 FPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_077 FPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
490 500 510 520 530 540
550 560
pF1KE3 PVRVLARRVRPDGSVQYLVEWGGGGIF
:::::::::::::::::::::::::::
NP_077 PVRVLARRVRPDGSVQYLVEWGGGGIF
550 560
>>XP_011512964 (OMIM: 602881) PREDICTED: PHD finger prot (567 aa)
initn: 4045 init1: 4045 opt: 4045 Z-score: 2344.6 bits: 443.7 E(85289): 7.4e-124
Smith-Waterman score: 4045; 99.8% identity (100.0% similar) in 567 aa overlap (1-567:1-567)
10 20 30 40 50 60
pF1KE3 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSSRLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSGPPDRSPLELHIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSGPPDRSPLELHIG
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 FPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
490 500 510 520 530 540
550 560
pF1KE3 PVRVLARRVRPDGSVQYLVEWGGGGIF
:::::::::::::::::::::::::::
XP_011 PVRVLARRVRPDGSVQYLVEWGGGGIF
550 560
>>XP_011512965 (OMIM: 602881) PREDICTED: PHD finger prot (566 aa)
initn: 3199 init1: 3199 opt: 4028 Z-score: 2334.8 bits: 441.9 E(85289): 2.6e-123
Smith-Waterman score: 4028; 99.6% identity (99.8% similar) in 567 aa overlap (1-567:1-566)
10 20 30 40 50 60
pF1KE3 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSSRLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSGPPDRSPLELHIG
::::::::::::::::::::::::: ::::::::::::::::::::::::::::::::::
XP_011 PSPNQSYQGSSGYNFRPTDARCLPS-PIRMFASFHPSASTAGTSGDSGPPDRSPLELHIG
430 440 450 460 470
490 500 510 520 530 540
pF1KE3 FPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
480 490 500 510 520 530
550 560
pF1KE3 PVRVLARRVRPDGSVQYLVEWGGGGIF
:::::::::::::::::::::::::::
XP_011 PVRVLARRVRPDGSVQYLVEWGGGGIF
540 550 560
>>XP_011512968 (OMIM: 602881) PREDICTED: PHD finger prot (498 aa)
initn: 2975 init1: 2975 opt: 2987 Z-score: 1737.2 bits: 331.1 E(85289): 5.1e-90
Smith-Waterman score: 2987; 86.9% identity (90.9% similar) in 495 aa overlap (1-492:1-490)
10 20 30 40 50 60
pF1KE3 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSSRLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
:::::::::::::::::::::::::::::::::::::::::::::::::::::. . ::
XP_011 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQSFA--PS
370 380 390 400 410
430 440 450 460 470
pF1KE3 PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSGPPDRSPL---EL
: : . . . : : : .: .: :. :. : . : ..:: .
XP_011 SRP-QCLHHPPALT-RVTRAAAATTSGPQMPAAC-PAPSGCLLPSTLLPAPQGPLGTVDP
420 430 440 450 460 470
480 490 500 510 520 530
pF1KE3 HIGFPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLS
. : : .. .:..
XP_011 QTGHPWNFTLVSPQTSLKVPPTR
480 490
>>XP_011512967 (OMIM: 602881) PREDICTED: PHD finger prot (499 aa)
initn: 3041 init1: 2972 opt: 2986 Z-score: 1736.6 bits: 331.0 E(85289): 5.5e-90
Smith-Waterman score: 2989; 85.5% identity (88.6% similar) in 510 aa overlap (1-510:1-499)
10 20 30 40 50 60
pF1KE3 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSSRLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
:::::::::::::::::::::::::::::::::::::::::::::::::::::. . ::
XP_011 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQSFA--PS
370 380 390 400 410
430 440 450 460 470 480
pF1KE3 PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSGPPDRSPLELHIG
: : . . . : : : .: .: :.: :. :: : :
XP_011 SRP-QCLHHPPALT-RVTRAAAATTSGPQM-----PAACPAAPSGCLLPSTLLPAPQGPL
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE3 FPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
.: . : ..: : ..: : : :
XP_011 GTVDPQTGHPWNFTLVSPQTSLKVP--PTR
480 490
>>NP_002627 (OMIM: 602881) PHD finger protein 1 isoform (457 aa)
initn: 2524 init1: 2524 opt: 2546 Z-score: 1484.2 bits: 284.2 E(85289): 6.3e-76
Smith-Waterman score: 2546; 95.2% identity (96.3% similar) in 375 aa overlap (1-374:1-375)
10 20 30 40 50 60
pF1KE3 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
250 260 270 280 290 300
310 320 330 340 350
pF1KE3 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALT-SFPSGQGPGG
::::::::::::::::::::::::::::::::::::::::::::::::: . : :.: .
NP_002 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTRAGPWGRGLTS
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE3 GVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPP
: . : :: :
NP_002 PGEAPEAGARAPEEEAEGESGGAGATLSSAQSARAPGAEGAGSSAEGTAAAPSGCLLPST
370 380 390 400 410 420
>>XP_011512972 (OMIM: 602881) PREDICTED: PHD finger prot (415 aa)
initn: 2521 init1: 2521 opt: 2543 Z-score: 1483.0 bits: 283.8 E(85289): 7.2e-76
Smith-Waterman score: 2543; 94.9% identity (96.3% similar) in 375 aa overlap (1-374:1-375)
10 20 30 40 50 60
pF1KE3 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
250 260 270 280 290 300
310 320 330 340 350
pF1KE3 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALT-SFPSGQGPGG
:::.::::::::::::::::::::::::::::::::::::::::::::: . : :.: .
XP_011 RSSRLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTRAGPWGRGLTS
310 320 330 340 350 360
360 370 380 390 400 410
pF1KE3 GVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPP
: . : :: :
XP_011 PGEAPEAGARAPEEEAEGESGGAGATLSSAQSARAPGAEGAGSSAEGTAVLCPLF
370 380 390 400 410
>>XP_011512971 (OMIM: 602881) PREDICTED: PHD finger prot (429 aa)
initn: 2521 init1: 2521 opt: 2521 Z-score: 1470.2 bits: 281.5 E(85289): 3.8e-75
Smith-Waterman score: 2521; 99.7% identity (100.0% similar) in 349 aa overlap (1-349:1-349)
10 20 30 40 50 60
pF1KE3 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
:::.:::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSSRLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTRPQCLHHPPAL
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
XP_011 TRVTRAAAATTSGPQMPAACPAAPSGCLLPSTLLPAPQGPLGTVDPQTGHPWNFTLVSPQ
370 380 390 400 410 420
>>XP_011512966 (OMIM: 602881) PREDICTED: PHD finger prot (535 aa)
initn: 2376 init1: 2376 opt: 2376 Z-score: 1385.4 bits: 266.1 E(85289): 2e-70
Smith-Waterman score: 3720; 94.2% identity (94.4% similar) in 567 aa overlap (1-567:1-535)
10 20 30 40 50 60
pF1KE3 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MAQPPRLSRSGASSLWDPASPAPTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
:::::::::::::::: ::::::::::::
XP_011 LSNRQQSYCYCGGPGE--------------------------------FYEFECCVCRGG
190 200
250 260 270 280 290 300
pF1KE3 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
210 220 230 240 250 260
310 320 330 340 350 360
pF1KE3 RSSKLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
:::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSSRLLSALNSHKDRFISGREIKKRKCLFGLHARMPPPVEPPTGDGALTSFPSGQGPGGG
270 280 290 300 310 320
370 380 390 400 410 420
pF1KE3 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQASVSPPS
330 340 350 360 370 380
430 440 450 460 470 480
pF1KE3 PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSGPPDRSPLELHIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSGPPDRSPLELHIG
390 400 410 420 430 440
490 500 510 520 530 540
pF1KE3 FPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
450 460 470 480 490 500
550 560
pF1KE3 PVRVLARRVRPDGSVQYLVEWGGGGIF
:::::::::::::::::::::::::::
XP_011 PVRVLARRVRPDGSVQYLVEWGGGGIF
510 520 530
>>XP_016866428 (OMIM: 602881) PREDICTED: PHD finger prot (334 aa)
initn: 1496 init1: 1496 opt: 1503 Z-score: 886.5 bits: 173.1 E(85289): 1.2e-42
Smith-Waterman score: 1503; 75.4% identity (83.7% similar) in 313 aa overlap (266-567:30-334)
240 250 260 270 280 290
pF1KE3 VCRGGPEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLL-LGELS
: . : :. : . .. ::: .: .
XP_016 MNLNAVCVAGALRKSGDYSFAGWMWPILSCITSVFAVRRNTLILIVRSSPSLLRIGTVC
10 20 30 40 50
300 310 320 330 340
pF1KE3 D-----TPKGER----SSKLLSALNSHKDRFISGREIKKRK-CLFGLHARMPPPVEPPTG
. :: : :: ::.: . . ..:..... . :: .. . . :. :
XP_016 SWGSFQTPPKENVLPGSSLLLTATRTVS---FQGERLRRGNVCLVSMLGCL--PLWSPLL
60 70 80 90 100 110
350 360 370 380 390 400
pF1KE3 DGALTSFPSGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRE
. . : :::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 E--MEHSP-GQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRE
120 130 140 150 160 170
410 420 430 440 450 460
pF1KE3 RAHLQRALQASVSPPSPSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RAHLQRALQASVSPPSPSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTS
180 190 200 210 220 230
470 480 490 500 510 520
pF1KE3 GDSGPPDRSPLELHIGFPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GDSGPPDRSPLELHIGFPTDIPKSAPHSMTASSSSVSSPSPGLPRRSAPPSPLCRSLSPG
240 250 260 270 280 290
530 540 550 560
pF1KE3 TGGGVRGGVGYLSRGDPVRVLARRVRPDGSVQYLVEWGGGGIF
:::::::::::::::::::::::::::::::::::::::::::
XP_016 TGGGVRGGVGYLSRGDPVRVLARRVRPDGSVQYLVEWGGGGIF
300 310 320 330
567 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 06:45:57 2016 done: Sun Nov 6 06:45:59 2016
Total Scan time: 13.700 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]