FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3759, 481 aa
  1>>>pF1KE3759 481 - 481 aa - 481 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8794+/-0.000782; mu= 16.4326+/- 0.047
 mean_var=98.3898+/-19.340, 0's: 0 Z-trim(110.2): 5  B-trim: 61 in 1/52
 Lambda= 0.129300
 statistics sampled from 11462 (11465) to 11462 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.352), width:  16
 Scan time:  3.330

The best scores are:                                      opt bits E(32554)
CCDS3433.1 PI4K2B gene_id:55300|Hs108|chr4         ( 481) 3306 627.0 1.3e-179
CCDS7469.1 PI4K2A gene_id:55361|Hs108|chr10        ( 479) 1852 355.8 5.9e-98


>>CCDS3433.1 PI4K2B gene_id:55300|Hs108|chr4              (481 aa)
 initn: 3306 init1: 3306 opt: 3306  Z-score: 3337.9  bits: 627.0 E(32554): 1.3e-179
Smith-Waterman score: 3306; 99.8% identity (99.8% similar) in 481 aa overlap (1-481:1-481)

               10        20        30        40        50        60
pF1KE3 MEDPSEPDRLASADGGSPEEEEDGEREPLLPRIAWAHPRRGAPGSAVRLLDAAGEEGEAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MEDPSEPDRLASADGGSPEEEEDGEREPLLPRIAWAHPRRGAPGSAVRLLDAAGEEGEAG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 DEELPLPPGDVGVSRSSPAELDRSRPAVSVTIGTSEMNAFLDDPEFADIMLRAEQAIEVG
       ::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::
CCDS34 DEELPLPPGDVGVSRSSSAELDRSRPAVSVTIGTSEMNAFLDDPEFADIMLRAEQAIEVG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 IFPERISQGSSGSYFVKDPKRKIIGVFKPKSEEPYGQLNPKWTKYVHKVCCPCCFGRGCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 IFPERISQGSSGSYFVKDPKRKIIGVFKPKSEEPYGQLNPKWTKYVHKVCCPCCFGRGCL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 IPNQGYLSEAGAYLVDNKLHLSIVPKTKVVWLVSETFNYNAIDRAKSRGKKYALEKVPKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 IPNQGYLSEAGAYLVDNKLHLSIVPKTKVVWLVSETFNYNAIDRAKSRGKKYALEKVPKV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 GRKFHRIGLPPKIGSFQLFVEGYKEAEYWLRKFEADPLPENIRKQFQSQFERLVILDYII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GRKFHRIGLPPKIGSFQLFVEGYKEAEYWLRKFEADPLPENIRKQFQSQFERLVILDYII
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 RNTDRGNDNWLVRYEKQKCEKEIDHKESKWIDDEEFLIKIAAIDNGLAFPFKHPDEWRAY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 RNTDRGNDNWLVRYEKQKCEKEIDHKESKWIDDEEFLIKIAAIDNGLAFPFKHPDEWRAY
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE3 PFHWAWLPQAKVPFSEEIRNLILPYISDMNFVQDLCEDLYELFKTDKGFDKATFESQMSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 PFHWAWLPQAKVPFSEEIRNLILPYISDMNFVQDLCEDLYELFKTDKGFDKATFESQMSV
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE3 MRGQILNLTQALRDGKSPFQLVQIPCVIVERSQGGSQGRIVHLSNSFTQTVNCRKPFFSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MRGQILNLTQALRDGKSPFQLVQIPCVIVERSQGGSQGRIVHLSNSFTQTVNCRKPFFSS
              430       440       450       460       470       480

        
pF1KE3 W
       :
CCDS34 W
        

>>CCDS7469.1 PI4K2A gene_id:55361|Hs108|chr10             (479 aa)
 initn: 1925 init1: 1172 opt: 1852  Z-score: 1872.1  bits: 355.8 E(32554): 5.9e-98
Smith-Waterman score: 1890; 59.8% identity (78.6% similar) in 490 aa overlap (17-481:9-479)

               10        20        30         40        50         
pF1KE3 MEDPSEPDRLASADGGSPEEEEDGEREPLLPRIAWAH-PRRGAPGSAVRLLDAAGEEGEA
                       :::. .  .    .:  . :: :.  .::.:::.  :::    .
CCDS74         MDETSPLVSPERAQPPDY--TFPSGSGAHFPQ--VPGGAVRVAAAAG----S
                       10          20        30          40        

      60        70        80            90                         
pF1KE3 GDEELPLPPGDVGVSRSSPAELDRSRPAV----SVTIGTS-------------------E
       :    : :::. : .:     :::.: :.    . :....                   :
CCDS74 G----PSPPGSPGHDRERQPLLDRARGAAAQGQTQTVAAQAQALAAQAAAAAHAAQAHRE
               50        60        70        80        90       100

        100       110       120       130       140       150      
pF1KE3 MNAFLDDPEFADIMLRAEQAIEVGIFPERISQGSSGSYFVKDPKRKIIGVFKPKSEEPYG
        : : .::::  .. .:: :::  :::::: ::::::::::::. .::.:::::.:::::
CCDS74 RNEFPEDPEFEAVVRQAELAIERCIFPERIYQGSSGSYFVKDPQGRIIAVFKPKNEEPYG
              110       120       130       140       150       160

        160       170       180       190       200       210      
pF1KE3 QLNPKWTKYVHKVCCPCCFGRGCLIPNQGYLSEAGAYLVDNKLHLSIVPKTKVVWLVSET
       .:::::::...:.:::::::: ::. :::::::::: :::.::.:.:::.::::.:.:::
CCDS74 HLNPKWTKWLQKLCCPCCFGRDCLVLNQGYLSEAGASLVDQKLELNIVPRTKVVYLASET
              170       180       190       200       210       220

        220       230       240       250       260       270      
pF1KE3 FNYNAIDRAKSRGKKYALEKVPKVGRKFHRIGLPPKIGSFQLFVEGYKEAEYWLRKFEAD
       :::.::::.:::::. :::::::::..:.:::::::.:::::::::::.:.::::.:::.
CCDS74 FNYSAIDRVKSRGKRLALEKVPKVGQRFNRIGLPPKVGSFQLFVEGYKDADYWLRRFEAE
              230       240       250       260       270       280

        280       290       300       310       320        330     
pF1KE3 PLPENIRKQFQSQFERLVILDYIIRNTDRGNDNWLVRYEKQKCEKEIDH-KESKWIDDEE
       :::::  .:.  ::::::.::::::::::::::::..:.   :  . .  ... :.  .:
CCDS74 PLPENTNRQLLLQFERLVVLDYIIRNTDRGNDNWLIKYD---CPMDSSSSRDTDWVVVKE
              290       300       310          320       330       

         340       350       360       370       380       390     
pF1KE3 FLIKIAAIDNGLAFPFKHPDEWRAYPFHWAWLPQAKVPFSEEIRNLILPYISDMNFVQDL
        .::.::::::::::.:::: ::::::.::::::::::::.::..:::: ::: :::.::
CCDS74 PVIKVAAIDNGLAFPLKHPDSWRAYPFYWAWLPQAKVPFSQEIKDLILPKISDPNFVKDL
       340       350       360       370       380       390       

         400       410       420       430       440       450     
pF1KE3 CEDLYELFKTDKGFDKATFESQMSVMRGQILNLTQALRDGKSPFQLVQIPCVIVERSQGG
        :::::::: : :::.. :..:..:::::::::::::.:.:::..:::.: :::: ... 
CCDS74 EEDLYELFKKDPGFDRGQFHKQIAVMRGQILNLTQALKDNKSPLHLVQMPPVIVETARSH
       400       410       420       430       440       450       

         460       470       480 
pF1KE3 SQGRIVHLSNSFTQTVNCRKPFFSSW
       ...     :.:.::. . :::::: :
CCDS74 QRSS----SESYTQSFQSRKPFFSWW
       460           470         




481 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 07:05:23 2016 done: Sun Nov  6 07:05:24 2016
 Total Scan time:  3.330 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]