Result of FASTA (ccds) for
pFN21AE3753
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3753, 201 aa
1>>>pF1KE3753 201 - 201 aa - 201 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4993+/-0.000623; mu= 14.3161+/- 0.038
mean_var=89.5336+/-17.340, 0's: 0 Z-trim(113.8): 62 B-trim: 0 in 0/54
Lambda= 0.135544
statistics sampled from 14337 (14400) to 14337 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.797), E-opt: 0.2 (0.442), width: 16
Scan time: 2.100
The best scores are: opt bits E(32554)
CCDS2637.1 UBE2E2 gene_id:7325|Hs108|chr3 ( 201) 1360 274.8 2.6e-74
CCDS2282.1 UBE2E3 gene_id:10477|Hs108|chr2 ( 207) 1178 239.2 1.4e-63
CCDS2638.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 193) 1097 223.3 7.5e-59
CCDS56244.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 160) 985 201.3 2.6e-52
CCDS2639.1 UBE2E1 gene_id:7324|Hs108|chr3 ( 176) 894 183.6 6.3e-47
CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 147) 670 139.7 8.4e-34
CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 147) 663 138.3 2.2e-33
CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 148) 663 138.3 2.2e-33
CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 ( 147) 661 138.0 2.9e-33
CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 147) 659 137.6 3.7e-33
CCDS3659.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 149) 646 135.0 2.2e-32
CCDS47275.1 UBE2D2 gene_id:7322|Hs108|chr5 ( 118) 544 115.0 1.9e-26
CCDS75172.1 UBE2D3 gene_id:7323|Hs108|chr4 ( 118) 539 114.0 3.7e-26
CCDS73139.1 UBE2D1 gene_id:7321|Hs108|chr10 ( 109) 489 104.2 3e-23
CCDS31875.1 UBE2N gene_id:7334|Hs108|chr12 ( 152) 427 92.2 1.7e-19
CCDS1425.1 UBE2T gene_id:29089|Hs108|chr1 ( 197) 400 87.0 8.2e-18
CCDS4174.1 UBE2B gene_id:7320|Hs108|chr5 ( 152) 396 86.1 1.2e-17
CCDS14580.1 UBE2A gene_id:7319|Hs108|chrX ( 152) 393 85.6 1.7e-17
CCDS33976.1 UBE2K gene_id:3093|Hs108|chr4 ( 200) 366 80.4 8.3e-16
CCDS13370.1 UBE2C gene_id:11065|Hs108|chr20 ( 179) 338 74.9 3.4e-14
CCDS13790.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 154) 337 74.6 3.5e-14
CCDS47043.1 UBE2K gene_id:3093|Hs108|chr4 ( 157) 327 72.7 1.4e-13
CCDS78500.1 UBE2A gene_id:7319|Hs108|chrX ( 119) 324 72.0 1.7e-13
CCDS58795.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 212) 326 72.6 2e-13
CCDS10433.1 UBE2I gene_id:7329|Hs108|chr16 ( 158) 317 70.7 5.4e-13
CCDS58796.1 UBE2L3 gene_id:7332|Hs108|chr22 ( 122) 309 69.1 1.3e-12
CCDS47874.2 UBE2W gene_id:55284|Hs108|chr8 ( 180) 310 69.4 1.5e-12
CCDS33114.1 UBE2S gene_id:27338|Hs108|chr19 ( 222) 309 69.3 2e-12
CCDS47875.2 UBE2W gene_id:55284|Hs108|chr8 ( 191) 304 68.2 3.6e-12
CCDS12987.1 UBE2M gene_id:9040|Hs108|chr19 ( 183) 302 67.8 4.6e-12
CCDS13374.1 UBE2C gene_id:11065|Hs108|chr20 ( 140) 296 66.6 8.4e-12
CCDS7960.1 UBE2L6 gene_id:9246|Hs108|chr11 ( 153) 283 64.0 5.2e-11
CCDS32532.1 UBE2G1 gene_id:7326|Hs108|chr17 ( 170) 280 63.5 8.5e-11
>>CCDS2637.1 UBE2E2 gene_id:7325|Hs108|chr3 (201 aa)
initn: 1360 init1: 1360 opt: 1360 Z-score: 1447.7 bits: 274.8 E(32554): 2.6e-74
Smith-Waterman score: 1360; 100.0% identity (100.0% similar) in 201 aa overlap (1-201:1-201)
10 20 30 40 50 60
pF1KE3 MSTEAQRVDDSPSTSGGSSDGDQRESVQQEPEREQVQPKKKEGKISSKTAAKLSTSAKRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 MSTEAQRVDDSPSTSGGSSDGDQRESVQQEPEREQVQPKKKEGKISSKTAAKLSTSAKRI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 QKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPPK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 VTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQ
130 140 150 160 170 180
190 200
pF1KE3 YMTNRAEHDRMARQWTKRYAT
:::::::::::::::::::::
CCDS26 YMTNRAEHDRMARQWTKRYAT
190 200
>>CCDS2282.1 UBE2E3 gene_id:10477|Hs108|chr2 (207 aa)
initn: 1077 init1: 1077 opt: 1178 Z-score: 1255.2 bits: 239.2 E(32554): 1.4e-63
Smith-Waterman score: 1178; 86.0% identity (93.2% similar) in 207 aa overlap (1-201:1-207)
10 20 30 40 50
pF1KE3 MSTEAQRVDD-SPSTSGGSSDGDQRESVQQEPE-REQVQP----KKKEGKISSKTAAKLS
::.. :: :: :::::.::::.:::. . ::: .:. .: .::. :.::::.::::
CCDS22 MSSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLSSKTTAKLS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
CCDS22 TSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS22 PFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLV
130 140 150 160 170 180
180 190 200
pF1KE3 GSIATQYMTNRAEHDRMARQWTKRYAT
:::::::.::::::::.::::::::::
CCDS22 GSIATQYLTNRAEHDRIARQWTKRYAT
190 200
>>CCDS2638.1 UBE2E1 gene_id:7324|Hs108|chr3 (193 aa)
initn: 1044 init1: 1044 opt: 1097 Z-score: 1170.0 bits: 223.3 E(32554): 7.5e-59
Smith-Waterman score: 1097; 84.5% identity (93.3% similar) in 194 aa overlap (9-201:4-193)
10 20 30 40 50
pF1KE3 MSTEAQRVDDSPSTSGGSSDGDQRESVQQEPEREQVQPKKKEGKIS-SKTAAKLSTSAKR
::: .....::.. : .:. :.: :::::.:.: ::.. :::::::
CCDS26 MSDDDSRASTSSSSSS----SSNQQTEKETNTPKKKESKVSMSKNSKLLSTSAKR
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 IQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPP
::::::.::::::::::::::::::::::::::::::::::::::::::::.:.::::::
CCDS26 IQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 KVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 KVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIAT
120 130 140 150 160 170
180 190 200
pF1KE3 QYMTNRAEHDRMARQWTKRYAT
::::::::::::::::::::::
CCDS26 QYMTNRAEHDRMARQWTKRYAT
180 190
>>CCDS56244.1 UBE2E1 gene_id:7324|Hs108|chr3 (160 aa)
initn: 985 init1: 985 opt: 985 Z-score: 1052.7 bits: 201.3 E(32554): 2.6e-52
Smith-Waterman score: 985; 97.9% identity (100.0% similar) in 143 aa overlap (59-201:18-160)
30 40 50 60 70 80
pF1KE3 QEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWR
:::::::.::::::::::::::::::::::
CCDS56 MKEVGRPREVRGRPGKSRIQKELADITLDPPPNCSAGPKGDNIYEWR
10 20 30 40
90 100 110 120 130 140
pF1KE3 STILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWS
::::::::::::::::::::::.:.:::::::::::::::::::::::::::::::::::
CCDS56 STILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWS
50 60 70 80 90 100
150 160 170 180 190 200
pF1KE3 PALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
:::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 PALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
110 120 130 140 150 160
>>CCDS2639.1 UBE2E1 gene_id:7324|Hs108|chr3 (176 aa)
initn: 916 init1: 869 opt: 894 Z-score: 956.0 bits: 183.6 E(32554): 6.3e-47
Smith-Waterman score: 937; 76.3% identity (84.5% similar) in 194 aa overlap (9-201:4-176)
10 20 30 40 50
pF1KE3 MSTEAQRVDDSPSTSGGSSDGDQRESVQQEPEREQVQPKKKEGKIS-SKTAAKLSTSAKR
::: .....::.. : .:. :.: :::::.:.: ::.. ::::::
CCDS26 MSDDDSRASTSSSSSS----SSNQQTEKETNTPKKKESKVSMSKNSKLLSTSAK-
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 IQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSPDYPFKPP
:::::::::::::::::::::::::::::::::::.:.::::::
CCDS26 ----------------SAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPP
60 70 80 90
120 130 140 150 160 170
pF1KE3 KVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS26 KVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIAT
100 110 120 130 140 150
180 190 200
pF1KE3 QYMTNRAEHDRMARQWTKRYAT
::::::::::::::::::::::
CCDS26 QYMTNRAEHDRMARQWTKRYAT
160 170
>>CCDS7252.1 UBE2D1 gene_id:7321|Hs108|chr10 (147 aa)
initn: 670 init1: 670 opt: 670 Z-score: 720.3 bits: 139.7 E(32554): 8.4e-34
Smith-Waterman score: 670; 62.9% identity (85.3% similar) in 143 aa overlap (58-200:4-146)
30 40 50 60 70 80
pF1KE3 QQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEW
:::::::... ::: .::::: ::....:
CCDS72 MALKRIQKELSDLQRDPPAHCSAGPVGDDLFHW
10 20 30
90 100 110 120 130 140
pF1KE3 RSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNW
..::.::: :.:.:::::: . : ::::::::..: :.::: ::::.: ::::::...:
CCDS72 QATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILRSQW
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE3 SPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
:::::.::::::::::: : :: :::: .:: : ... ...: ::.::..::
CCDS72 SPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNRHAREWTQKYAM
100 110 120 130 140
>>CCDS43369.1 UBE2D2 gene_id:7322|Hs108|chr5 (147 aa)
initn: 663 init1: 663 opt: 663 Z-score: 712.9 bits: 138.3 E(32554): 2.2e-33
Smith-Waterman score: 663; 65.7% identity (83.9% similar) in 143 aa overlap (58-200:4-146)
30 40 50 60 70 80
pF1KE3 QQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEW
:::.::: ... ::: .::::: ::....:
CCDS43 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHW
10 20 30
90 100 110 120 130 140
pF1KE3 RSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNW
..::.:: : :.:::::: : : :::::::::.: ::::: ::::.: ::::::...:
CCDS43 QATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQW
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE3 SPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
::::::::::::::::: : :: :::: :: : :.: ...:.::.::..::
CCDS43 SPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM
100 110 120 130 140
>>CCDS3661.1 UBE2D3 gene_id:7323|Hs108|chr4 (148 aa)
initn: 663 init1: 663 opt: 663 Z-score: 712.9 bits: 138.3 E(32554): 2.2e-33
Smith-Waterman score: 663; 65.7% identity (84.6% similar) in 143 aa overlap (58-200:4-146)
30 40 50 60 70 80
pF1KE3 QQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEW
:::.:::.... ::: .::::: ::....:
CCDS36 MALKRINKELSDLARDPPAQCSAGPVGDDMFHW
10 20 30
90 100 110 120 130 140
pF1KE3 RSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNW
..::.:: : :.:::::: : : :::::::::.: ::::: ::::.: ::::::...:
CCDS36 QATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQW
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE3 SPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
::::::::::::::::: : :: :::: :: : :.: ...:.::.::..::
CCDS36 SPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRLAREWTEKYAML
100 110 120 130 140
>>CCDS5474.1 UBE2D4 gene_id:51619|Hs108|chr7 (147 aa)
initn: 661 init1: 661 opt: 661 Z-score: 710.8 bits: 138.0 E(32554): 2.9e-33
Smith-Waterman score: 661; 64.3% identity (83.9% similar) in 143 aa overlap (58-200:4-146)
30 40 50 60 70 80
pF1KE3 QQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEW
:::::::... ::: .::::: ::....:
CCDS54 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHW
10 20 30
90 100 110 120 130 140
pF1KE3 RSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNW
..::.:: : :.:::::: : : :::::::::.: :.::: ::::.: ::::::...:
CCDS54 QATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQW
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE3 SPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
:::::.::::::::::: : :: :::: :: : ..: ...:.::.::..::
CCDS54 SPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWTQKYAM
100 110 120 130 140
>>CCDS3660.1 UBE2D3 gene_id:7323|Hs108|chr4 (147 aa)
initn: 659 init1: 659 opt: 659 Z-score: 708.7 bits: 137.6 E(32554): 3.7e-33
Smith-Waterman score: 659; 65.0% identity (84.6% similar) in 143 aa overlap (58-200:4-146)
30 40 50 60 70 80
pF1KE3 QQEPEREQVQPKKKEGKISSKTAAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEW
:::.:::.... ::: .::::: ::....:
CCDS36 MALKRINKELSDLARDPPAQCSAGPVGDDMFHW
10 20 30
90 100 110 120 130 140
pF1KE3 RSTILGPPGSVYEGGVFFLDITFSPDYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNW
..::.:: : :.:::::: : : :::::::::.: ::::: ::::.: ::::::...:
CCDS36 QATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQW
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE3 SPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT
::::::::::::::::: : :: :::: :: : :.: ...:..:.::..::
CCDS36 SPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRDKYNRISREWTQKYAM
100 110 120 130 140
201 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 07:52:26 2016 done: Sun Nov 6 07:52:27 2016
Total Scan time: 2.100 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]