Result of FASTA (ccds) for
pFN21AE3719
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3719, 2098 aa
1>>>pF1KE3719 2098 - 2098 aa - 2098 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.9343+/-0.00104; mu= 18.4856+/- 0.063
mean_var=118.6583+/-23.806, 0's: 0 Z-trim(107.2): 78 B-trim: 277 in 1/52
Lambda= 0.117740
statistics sampled from 9370 (9448) to 9370 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.29), width: 16
Scan time: 4.440
The best scores are: opt bits E(32554)
CCDS2382.1 PIKFYVE gene_id:200576|Hs108|chr2 (2098) 14102 2408.0 0
CCDS54431.1 PIKFYVE gene_id:200576|Hs108|chr2 ( 548) 3719 643.9 5.5e-184
CCDS33368.1 PIKFYVE gene_id:200576|Hs108|chr2 ( 451) 2288 400.8 7e-111
CCDS30888.1 CCT3 gene_id:7203|Hs108|chr1 ( 507) 357 72.8 4.2e-12
CCDS1140.2 CCT3 gene_id:7203|Hs108|chr1 ( 545) 357 72.8 4.5e-12
>>CCDS2382.1 PIKFYVE gene_id:200576|Hs108|chr2 (2098 aa)
initn: 14102 init1: 14102 opt: 14102 Z-score: 12939.9 bits: 2408.0 E(32554): 0
Smith-Waterman score: 14102; 100.0% identity (100.0% similar) in 2098 aa overlap (1-2098:1-2098)
10 20 30 40 50 60
pF1KE3 MATDDKTSPTLDSANDLPRSPTSPSHLTHFKPLTPDQDEPPFKSAYSSFVNLFRFNKERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 MATDDKTSPTLDSANDLPRSPTSPSHLTHFKPLTPDQDEPPFKSAYSSFVNLFRFNKERA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EGGQGEQQPLSGSWTSPQLPSRTQSVRSPTPYKKQLNEELQRRSSALDTRRKAEPTFGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 EGGQGEQQPLSGSWTSPQLPSRTQSVRSPTPYKKQLNEELQRRSSALDTRRKAEPTFGGH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DPRTAVQLRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 DPRTAVQLRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 RLCGQIFCSRCCNQEIPGKFMGYTGDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 RLCGQIFCSRCCNQEIPGKFMGYTGDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 CSVSVLDPSEPRTPVGSRKASRNIFLEDDLAWQSLIHPDSSNTPLSTRLVSVQEDAGKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 CSVSVLDPSEPRTPVGSRKASRNIFLEDDLAWQSLIHPDSSNTPLSTRLVSVQEDAGKSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 ARNRSASITNLSLDRSGSPMVPSYETSVSPQANRTYVRTETTEDERKILLDSVQLKDLWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 ARNRSASITNLSLDRSGSPMVPSYETSVSPQANRTYVRTETTEDERKILLDSVQLKDLWK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 KICHHSSGMEFQDHRYWLRTHPNCIVGKELVNWLIRNGHIATRAQAIAIGQAMVDGRWLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 KICHHSSGMEFQDHRYWLRTHPNCIVGKELVNWLIRNGHIATRAQAIAIGQAMVDGRWLD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 CVSHHDQLFRDEYALYRPLQSTEFSETPSPDSDSVNSVEGHSEPSWFKDIKFDDSDTEQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 CVSHHDQLFRDEYALYRPLQSTEFSETPSPDSDSVNSVEGHSEPSWFKDIKFDDSDTEQI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 AEEGDDNLANSASPSKRTSVSSFQSTVDSDSAASISLNVELDNVNFHIKKPSKYPHVPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 AEEGDDNLANSASPSKRTSVSSFQSTVDSDSAASISLNVELDNVNFHIKKPSKYPHVPPH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 PADQKEYLISDTGGQQLSISDAFIKESLFNRRVEEKSKELPFTPLGWHHNNLELLREENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 PADQKEYLISDTGGQQLSISDAFIKESLFNRRVEEKSKELPFTPLGWHHNNLELLREENG
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 EKQAMERLLSANHNHMMALLQQLLHSDSLSSSWRDIIVSLVCQVVQTVRPDVKNQDDDMD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 EKQAMERLLSANHNHMMALLQQLLHSDSLSSSWRDIIVSLVCQVVQTVRPDVKNQDDDMD
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 IRQFVHIKKIPGGKKFDSVVVNGFVCTKNIAHKKMSSCIKNPKILLLKCSIEYLYREETK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 IRQFVHIKKIPGGKKFDSVVVNGFVCTKNIAHKKMSSCIKNPKILLLKCSIEYLYREETK
670 680 690 700 710 720
730 740 750 760 770 780
pF1KE3 FTCIDPIVLQEREFLKNYVQRIVDVRPTLVLVEKTVSRIAQDMLLEHGITLVINVKSQVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 FTCIDPIVLQEREFLKNYVQRIVDVRPTLVLVEKTVSRIAQDMLLEHGITLVINVKSQVL
730 740 750 760 770 780
790 800 810 820 830 840
pF1KE3 ERISRMTQGDLVMSMDQLLTKPHLGTCHKFYMQIFQLPNEQTKTLMFFEGCPQHLGCTIK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 ERISRMTQGDLVMSMDQLLTKPHLGTCHKFYMQIFQLPNEQTKTLMFFEGCPQHLGCTIK
790 800 810 820 830 840
850 860 870 880 890 900
pF1KE3 LRGGSDYELARVKEILIFMICVAYHSQLEISFLMDEFAMPPTLMQNPSFHSLIEGRGHEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 LRGGSDYELARVKEILIFMICVAYHSQLEISFLMDEFAMPPTLMQNPSFHSLIEGRGHEG
850 860 870 880 890 900
910 920 930 940 950 960
pF1KE3 AVQEQYGGGSIPWDPDIPPESLPCDDSSLLELRIVFEKGEQENKNLPQAVASVKHQEHST
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 AVQEQYGGGSIPWDPDIPPESLPCDDSSLLELRIVFEKGEQENKNLPQAVASVKHQEHST
910 920 930 940 950 960
970 980 990 1000 1010 1020
pF1KE3 TACPAGLPCAFFAPVPESLLPLPVDDQQDALGSEQPETLQQTVVLQDPKSQIRAFRDPLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 TACPAGLPCAFFAPVPESLLPLPVDDQQDALGSEQPETLQQTVVLQDPKSQIRAFRDPLQ
970 980 990 1000 1010 1020
1030 1040 1050 1060 1070 1080
pF1KE3 DDTGLYVTEEVTSSEDKRKTYSLAFKQELKDVILCISPVITFREPFLLTEKGMRCSTRDY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 DDTGLYVTEEVTSSEDKRKTYSLAFKQELKDVILCISPVITFREPFLLTEKGMRCSTRDY
1030 1040 1050 1060 1070 1080
1090 1100 1110 1120 1130 1140
pF1KE3 FAEQVYWSPLLNKEFKEMENRRKKQLLRDLSGLQGMNGSIQAKSIQVLPSHELVSTRIAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 FAEQVYWSPLLNKEFKEMENRRKKQLLRDLSGLQGMNGSIQAKSIQVLPSHELVSTRIAE
1090 1100 1110 1120 1130 1140
1150 1160 1170 1180 1190 1200
pF1KE3 HLGDSQSLGRMLADYRARGGRIQPKNSDPFAHSKDASSTSSGQSGSKNEGDEERGLILSD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 HLGDSQSLGRMLADYRARGGRIQPKNSDPFAHSKDASSTSSGQSGSKNEGDEERGLILSD
1150 1160 1170 1180 1190 1200
1210 1220 1230 1240 1250 1260
pF1KE3 AVWSTKVDCLNPINHQRLCVLFSSSSAQSSNAPSACVSPWIVTMEFYGKNDLTLGIFLER
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 AVWSTKVDCLNPINHQRLCVLFSSSSAQSSNAPSACVSPWIVTMEFYGKNDLTLGIFLER
1210 1220 1230 1240 1250 1260
1270 1280 1290 1300 1310 1320
pF1KE3 YCFRPSYQCPSMFCDTPMVHHIRRFVHGQGCVQIILKELDSPVPGYQHTILTYSWCRICK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 YCFRPSYQCPSMFCDTPMVHHIRRFVHGQGCVQIILKELDSPVPGYQHTILTYSWCRICK
1270 1280 1290 1300 1310 1320
1330 1340 1350 1360 1370 1380
pF1KE3 QVTPVVALSNESWSMSFAKYLELRFYGHQYTRRANAEPCGHSIHHDYHQYFSYNQMVASF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 QVTPVVALSNESWSMSFAKYLELRFYGHQYTRRANAEPCGHSIHHDYHQYFSYNQMVASF
1330 1340 1350 1360 1370 1380
1390 1400 1410 1420 1430 1440
pF1KE3 SYSPIRLLEVCVPLPKIFIKRQAPLKVSLLQDLKDFFQKVSQVYVAIDERLASLKTDTFS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 SYSPIRLLEVCVPLPKIFIKRQAPLKVSLLQDLKDFFQKVSQVYVAIDERLASLKTDTFS
1390 1400 1410 1420 1430 1440
1450 1460 1470 1480 1490 1500
pF1KE3 KTREEKMEDIFAQKEMEEGEFKNWIEKMQARLMSSSVDTPQQLQSVFESLIAKKQSLCEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 KTREEKMEDIFAQKEMEEGEFKNWIEKMQARLMSSSVDTPQQLQSVFESLIAKKQSLCEV
1450 1460 1470 1480 1490 1500
1510 1520 1530 1540 1550 1560
pF1KE3 LQAWNNRLQDLFQQEKGRKRPSVPPSPGRLRQGEESKISAMDASPRNISPGLQNGEKEDR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 LQAWNNRLQDLFQQEKGRKRPSVPPSPGRLRQGEESKISAMDASPRNISPGLQNGEKEDR
1510 1520 1530 1540 1550 1560
1570 1580 1590 1600 1610 1620
pF1KE3 FLTTLSSQSSTSSTHLQLPTPPEVMSEQSVGGPPELDTASSSEDVFDGHLLGSTDSQVKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 FLTTLSSQSSTSSTHLQLPTPPEVMSEQSVGGPPELDTASSSEDVFDGHLLGSTDSQVKE
1570 1580 1590 1600 1610 1620
1630 1640 1650 1660 1670 1680
pF1KE3 KSTMKAIFANLLPGNSYNPIPFPFDPDKHYLMYEHERVPIAVCEKEPSSIIAFALSCKEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 KSTMKAIFANLLPGNSYNPIPFPFDPDKHYLMYEHERVPIAVCEKEPSSIIAFALSCKEY
1630 1640 1650 1660 1670 1680
1690 1700 1710 1720 1730 1740
pF1KE3 RNALEELSKATQWNSAEEGLPTNSTSDSRPKSSSPIRLPEMSGGQTNRTTETEPQPTKKA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 RNALEELSKATQWNSAEEGLPTNSTSDSRPKSSSPIRLPEMSGGQTNRTTETEPQPTKKA
1690 1700 1710 1720 1730 1740
1750 1760 1770 1780 1790 1800
pF1KE3 SGMLSFFRGTAGKSPDLSSQKRETLRGADSAYYQVGQTGKEGTENQGVEPQDEVDGGDTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 SGMLSFFRGTAGKSPDLSSQKRETLRGADSAYYQVGQTGKEGTENQGVEPQDEVDGGDTQ
1750 1760 1770 1780 1790 1800
1810 1820 1830 1840 1850 1860
pF1KE3 KKQLINPHVELQFSDANAKFYCRLYYAGEFHKMREVILDSSEEDFIRSLSHSSPWQARGG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 KKQLINPHVELQFSDANAKFYCRLYYAGEFHKMREVILDSSEEDFIRSLSHSSPWQARGG
1810 1820 1830 1840 1850 1860
1870 1880 1890 1900 1910 1920
pF1KE3 KSGAAFYATEDDRFILKQMPRLEVQSFLDFAPHYFNYITNAVQQKRPTALAKILGVYRIG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 KSGAAFYATEDDRFILKQMPRLEVQSFLDFAPHYFNYITNAVQQKRPTALAKILGVYRIG
1870 1880 1890 1900 1910 1920
1930 1940 1950 1960 1970 1980
pF1KE3 YKNSQNNTEKKLDLLVMENLFYGRKMAQVFDLKGSLRNRNVKTDTGKESCDVVLLDENLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 YKNSQNNTEKKLDLLVMENLFYGRKMAQVFDLKGSLRNRNVKTDTGKESCDVVLLDENLL
1930 1940 1950 1960 1970 1980
1990 2000 2010 2020 2030 2040
pF1KE3 KMVRDNPLYIRSHSKAVLRTSIHSDSHFLSSHLIIDYSLLVGRDDTSNELVVGIIDYIRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 KMVRDNPLYIRSHSKAVLRTSIHSDSHFLSSHLIIDYSLLVGRDDTSNELVVGIIDYIRT
1990 2000 2010 2020 2030 2040
2050 2060 2070 2080 2090
pF1KE3 FTWDKKLEMVVKSTGILGGQGKMPTVVSPELYRTRFCEAMDKYFLMVPDHWTGLGLNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS23 FTWDKKLEMVVKSTGILGGQGKMPTVVSPELYRTRFCEAMDKYFLMVPDHWTGLGLNC
2050 2060 2070 2080 2090
>>CCDS54431.1 PIKFYVE gene_id:200576|Hs108|chr2 (548 aa)
initn: 3719 init1: 3719 opt: 3719 Z-score: 3416.6 bits: 643.9 E(32554): 5.5e-184
Smith-Waterman score: 3719; 100.0% identity (100.0% similar) in 545 aa overlap (1-545:1-545)
10 20 30 40 50 60
pF1KE3 MATDDKTSPTLDSANDLPRSPTSPSHLTHFKPLTPDQDEPPFKSAYSSFVNLFRFNKERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 MATDDKTSPTLDSANDLPRSPTSPSHLTHFKPLTPDQDEPPFKSAYSSFVNLFRFNKERA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EGGQGEQQPLSGSWTSPQLPSRTQSVRSPTPYKKQLNEELQRRSSALDTRRKAEPTFGGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 EGGQGEQQPLSGSWTSPQLPSRTQSVRSPTPYKKQLNEELQRRSSALDTRRKAEPTFGGH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DPRTAVQLRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 DPRTAVQLRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 RLCGQIFCSRCCNQEIPGKFMGYTGDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 RLCGQIFCSRCCNQEIPGKFMGYTGDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 CSVSVLDPSEPRTPVGSRKASRNIFLEDDLAWQSLIHPDSSNTPLSTRLVSVQEDAGKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 CSVSVLDPSEPRTPVGSRKASRNIFLEDDLAWQSLIHPDSSNTPLSTRLVSVQEDAGKSP
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 ARNRSASITNLSLDRSGSPMVPSYETSVSPQANRTYVRTETTEDERKILLDSVQLKDLWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 ARNRSASITNLSLDRSGSPMVPSYETSVSPQANRTYVRTETTEDERKILLDSVQLKDLWK
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 KICHHSSGMEFQDHRYWLRTHPNCIVGKELVNWLIRNGHIATRAQAIAIGQAMVDGRWLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 KICHHSSGMEFQDHRYWLRTHPNCIVGKELVNWLIRNGHIATRAQAIAIGQAMVDGRWLD
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 CVSHHDQLFRDEYALYRPLQSTEFSETPSPDSDSVNSVEGHSEPSWFKDIKFDDSDTEQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 CVSHHDQLFRDEYALYRPLQSTEFSETPSPDSDSVNSVEGHSEPSWFKDIKFDDSDTEQI
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 AEEGDDNLANSASPSKRTSVSSFQSTVDSDSAASISLNVELDNVNFHIKKPSKYPHVPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS54 AEEGDDNLANSASPSKRTSVSSFQSTVDSDSAASISLNVELDNVNFHIKKPSKYPHVPPH
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 PADQKEYLISDTGGQQLSISDAFIKESLFNRRVEEKSKELPFTPLGWHHNNLELLREENG
:::::
CCDS54 PADQKGRR
>>CCDS33368.1 PIKFYVE gene_id:200576|Hs108|chr2 (451 aa)
initn: 2997 init1: 2288 opt: 2288 Z-score: 2104.2 bits: 400.8 E(32554): 7e-111
Smith-Waterman score: 2807; 82.2% identity (82.2% similar) in 545 aa overlap (1-545:1-448)
10 20 30 40 50 60
pF1KE3 MATDDKTSPTLDSANDLPRSPTSPSHLTHFKPLTPDQDEPPFKSAYSSFVNLFRFNKERA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 MATDDKTSPTLDSANDLPRSPTSPSHLTHFKPLTPDQDEPPFKSAYSSFVNLFRFNKERA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EGGQGEQQPLSGSWTSPQLPSRTQSVRSPTPYKKQLNEELQRRSSALDTRRKAEPTFGGH
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 EGGQGEQQPLSGSWTSPQLPSRTQSVRSPTPYKKQLNEELQRRSSAL-------------
70 80 90 100
130 140 150 160 170 180
pF1KE3 DPRTAVQLRSLSTVLKRLKEIMEGKSQDSDLKQYWMPDSQCKECYDCSEKFTTFRRRHHC
CCDS33 ------------------------------------------------------------
190 200 210 220 230 240
pF1KE3 RLCGQIFCSRCCNQEIPGKFMGYTGDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSA
::::::::::::::::::::::::::::::::::::
CCDS33 ------------------------GDLRACTYCRKIALSYAHSTDSNSIGEDLNALSDSA
110 120 130 140
250 260 270 280 290 300
pF1KE3 CSVSVLDPSEPRTPVGSRKASRNIFLEDDLAWQSLIHPDSSNTPLSTRLVSVQEDAGKSP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 CSVSVLDPSEPRTPVGSRKASRNIFLEDDLAWQSLIHPDSSNTPLSTRLVSVQEDAGKSP
150 160 170 180 190 200
310 320 330 340 350 360
pF1KE3 ARNRSASITNLSLDRSGSPMVPSYETSVSPQANRTYVRTETTEDERKILLDSVQLKDLWK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 ARNRSASITNLSLDRSGSPMVPSYETSVSPQANRTYVRTETTEDERKILLDSVQLKDLWK
210 220 230 240 250 260
370 380 390 400 410 420
pF1KE3 KICHHSSGMEFQDHRYWLRTHPNCIVGKELVNWLIRNGHIATRAQAIAIGQAMVDGRWLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 KICHHSSGMEFQDHRYWLRTHPNCIVGKELVNWLIRNGHIATRAQAIAIGQAMVDGRWLD
270 280 290 300 310 320
430 440 450 460 470 480
pF1KE3 CVSHHDQLFRDEYALYRPLQSTEFSETPSPDSDSVNSVEGHSEPSWFKDIKFDDSDTEQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 CVSHHDQLFRDEYALYRPLQSTEFSETPSPDSDSVNSVEGHSEPSWFKDIKFDDSDTEQI
330 340 350 360 370 380
490 500 510 520 530 540
pF1KE3 AEEGDDNLANSASPSKRTSVSSFQSTVDSDSAASISLNVELDNVNFHIKKPSKYPHVPPH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS33 AEEGDDNLANSASPSKRTSVSSFQSTVDSDSAASISLNVELDNVNFHIKKPSKYPHVPPH
390 400 410 420 430 440
550 560 570 580 590 600
pF1KE3 PADQKEYLISDTGGQQLSISDAFIKESLFNRRVEEKSKELPFTPLGWHHNNLELLREENG
:::::
CCDS33 PADQKGRR
450
>>CCDS30888.1 CCT3 gene_id:7203|Hs108|chr1 (507 aa)
initn: 253 init1: 174 opt: 357 Z-score: 330.8 bits: 72.8 E(32554): 4.2e-12
Smith-Waterman score: 357; 25.5% identity (58.6% similar) in 345 aa overlap (611-943:109-436)
590 600 610 620 630 640
pF1KE3 PFTPLGWHHNNLELLREENGEKQAMERLLSANHNHMMALLQQLLHSDSLSSSWRDIIVSL
.. . :. .... . . ..: : .. ..
CCDS30 MHPTVVISAYRKALDDMISTLKKISIPVDISDSDMMLNIINSSITTKAISR-WSSLACNI
80 90 100 110 120 130
650 660 670 680 690 700
pF1KE3 VCQVVQTVRPDVKNQDDDMDIRQFVHIKKIPGGKKFDSVVVNGFVCTKNIAHKKMSSCIK
. ..:. :. . .: ..::.......::::: :: :. : . .:...: .: ::
CCDS30 ALDAVKMVQFE-ENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIK
140 150 160 170 180 190
710 720 730 740 750
pF1KE3 NPKILLLKCSIEYLYREE------TKFTCIDPIVLQEREFLKNYVQRIVDVRPTLVLVEK
::.:.:: :.:: : :. . :. .:.:.... . :....: .:..::
CCDS30 NPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEK
200 210 220 230 240 250
760 770 780 790 800 810
pF1KE3 TVSRIAQDMLLEHGITLVINVKSQVLERISRMTQGDLVMSMDQLLTKPHLGTCHKFYMQI
.: .:: .:.. .:: . :.. .::.: : ..: . : . .:: . ..:
CCDS30 GISDLAQHYLMRANITAIRRVRKTDNNRIARAC-GARIVSRPEELREDDVGTGAGL-LEI
260 270 280 290 300 310
820 830 840 850 860 870
pF1KE3 FQLPNEQTKTLMFFEGCPQHLGCTIKLRGGSDYELARVKEIL--IFMICVAYHSQLEISF
.. .: . :. : . .::: :::.: :..:.. : ...: .
CCDS30 KKIGDEY---FTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCR--------NV
320 330 340 350 360
880 890 900 910 920
pF1KE3 LMDEFAMPPTLMQNPSF-HSLIE-GRGHEGAVQEQYGGGSIPWDPDIPPESL--PCDDSS
:.: .: .. . :.: : ... :. ::. .. .. :..: : :.
CCDS30 LLDPQLVPGGGASEMAVAHALTEKSKAMTGV--EQWPYRAVAQALEVIPRTLIQNCGAST
370 380 390 400 410 420
930 940 950 960 970 980
pF1KE3 LLELRIVFEKGEQENKNLPQAVASVKHQEHSTTACPAGLPCAFFAPVPESLLPLPVDDQQ
. : . : :::
CCDS30 IRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRI
430 440 450 460 470 480
>>CCDS1140.2 CCT3 gene_id:7203|Hs108|chr1 (545 aa)
initn: 253 init1: 174 opt: 357 Z-score: 330.3 bits: 72.8 E(32554): 4.5e-12
Smith-Waterman score: 357; 25.5% identity (58.6% similar) in 345 aa overlap (611-943:147-474)
590 600 610 620 630 640
pF1KE3 PFTPLGWHHNNLELLREENGEKQAMERLLSANHNHMMALLQQLLHSDSLSSSWRDIIVSL
.. . :. .... . . ..: : .. ..
CCDS11 MHPTVVISAYRKALDDMISTLKKISIPVDISDSDMMLNIINSSITTKAISR-WSSLACNI
120 130 140 150 160 170
650 660 670 680 690 700
pF1KE3 VCQVVQTVRPDVKNQDDDMDIRQFVHIKKIPGGKKFDSVVVNGFVCTKNIAHKKMSSCIK
. ..:. :. . .: ..::.......::::: :: :. : . .:...: .: ::
CCDS11 ALDAVKMVQFE-ENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIK
180 190 200 210 220 230
710 720 730 740 750
pF1KE3 NPKILLLKCSIEYLYREE------TKFTCIDPIVLQEREFLKNYVQRIVDVRPTLVLVEK
::.:.:: :.:: : :. . :. .:.:.... . :....: .:..::
CCDS11 NPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEK
240 250 260 270 280 290
760 770 780 790 800 810
pF1KE3 TVSRIAQDMLLEHGITLVINVKSQVLERISRMTQGDLVMSMDQLLTKPHLGTCHKFYMQI
.: .:: .:.. .:: . :.. .::.: : ..: . : . .:: . ..:
CCDS11 GISDLAQHYLMRANITAIRRVRKTDNNRIARAC-GARIVSRPEELREDDVGTGAGL-LEI
300 310 320 330 340 350
820 830 840 850 860 870
pF1KE3 FQLPNEQTKTLMFFEGCPQHLGCTIKLRGGSDYELARVKEIL--IFMICVAYHSQLEISF
.. .: . :. : . .::: :::.: :..:.. : ...: .
CCDS11 KKIGDEY---FTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCR--------NV
360 370 380 390 400
880 890 900 910 920
pF1KE3 LMDEFAMPPTLMQNPSF-HSLIE-GRGHEGAVQEQYGGGSIPWDPDIPPESL--PCDDSS
:.: .: .. . :.: : ... :. ::. .. .. :..: : :.
CCDS11 LLDPQLVPGGGASEMAVAHALTEKSKAMTGV--EQWPYRAVAQALEVIPRTLIQNCGAST
410 420 430 440 450
930 940 950 960 970 980
pF1KE3 LLELRIVFEKGEQENKNLPQAVASVKHQEHSTTACPAGLPCAFFAPVPESLLPLPVDDQQ
. : . : :::
CCDS11 IRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRI
460 470 480 490 500 510
2098 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 09:25:54 2016 done: Sun Nov 6 09:25:55 2016
Total Scan time: 4.440 Total Display time: 0.120
Function used was FASTA [36.3.4 Apr, 2011]