FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3685, 320 aa
  1>>>pF1KE3685 320 - 320 aa - 320 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 11.0001+/-0.00103; mu= -8.4656+/- 0.063
 mean_var=356.4887+/-72.092, 0's: 0 Z-trim(114.6): 100  B-trim: 0 in 0/55
 Lambda= 0.067928
 statistics sampled from 15067 (15159) to 15067 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.751), E-opt: 0.2 (0.466), width:  16
 Scan time:  3.140

The best scores are:                                      opt bits E(32554)
CCDS660.1 ZRANB2 gene_id:9406|Hs108|chr1           ( 320) 2093 218.3 6.4e-57
CCDS659.1 ZRANB2 gene_id:9406|Hs108|chr1           ( 330) 2022 211.4 8.2e-55


>>CCDS660.1 ZRANB2 gene_id:9406|Hs108|chr1                (320 aa)
 initn: 2093 init1: 2093 opt: 2093  Z-score: 1135.4  bits: 218.3 E(32554): 6.4e-57
Smith-Waterman score: 2093; 99.7% identity (99.7% similar) in 320 aa overlap (1-320:1-320)

               10        20        30        40        50        60
pF1KE3 MSTKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MSTKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 RGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 RGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREES
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 DGEYDEFGRKKKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 DGEYDEFGRKKKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 SKYNLDASEEEDSNKKKSNRRSRSKSGSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSR
       :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
CCDS66 SKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 SRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 SRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKK
              250       260       270       280       290       300

              310       320
pF1KE3 RRTRSRSPESQVIGENTKQP
       ::::::::::::::::::::
CCDS66 RRTRSRSPESQVIGENTKQP
              310       320

>>CCDS659.1 ZRANB2 gene_id:9406|Hs108|chr1                (330 aa)
 initn: 2022 init1: 2022 opt: 2022  Z-score: 1097.6  bits: 211.4 E(32554): 8.2e-55
Smith-Waterman score: 2022; 99.7% identity (99.7% similar) in 309 aa overlap (1-309:1-309)

               10        20        30        40        50        60
pF1KE3 MSTKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MSTKNFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 RGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 RGLFSANDWQCKTCSNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENVEYIEREES
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 DGEYDEFGRKKKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 DGEYDEFGRKKKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 SKYNLDASEEEDSNKKKSNRRSRSKSGSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSR
       :::::::::::::::::::::::::: :::::::::::::::::::::::::::::::::
CCDS65 SKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSR
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 SRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 SRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKK
              250       260       270       280       290       300

              310       320          
pF1KE3 RRTRSRSPESQVIGENTKQP          
       :::::::::                     
CCDS65 RRTRSRSPERRHRSSSGSSHSGSRSSSKKK
              310       320       330




320 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 03:28:08 2016 done: Mon Nov  7 03:28:08 2016
 Total Scan time:  3.140 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]