Result of FASTA (ccds) for
pFN21AE3682
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3682, 417 aa
1>>>pF1KE3682 417 - 417 aa - 417 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 7.3519+/-0.000757; mu= 11.7154+/- 0.046
mean_var=207.6435+/-41.761, 0's: 0 Z-trim(117.0): 66 B-trim: 171 in 1/52
Lambda= 0.089005
statistics sampled from 17591 (17659) to 17591 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.833), E-opt: 0.2 (0.542), width: 16
Scan time: 3.760
The best scores are: opt bits E(32554)
CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 ( 417) 2988 395.6 4.6e-110
CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 ( 417) 2977 394.2 1.2e-109
CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 ( 416) 2922 387.1 1.6e-107
CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 ( 416) 2920 386.9 2e-107
CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 ( 439) 2404 320.6 1.8e-87
CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 ( 408) 1980 266.2 4.2e-71
CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 ( 495) 767 110.5 3.7e-24
CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 ( 465) 756 109.1 9.4e-24
CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 ( 478) 685 100.0 5.3e-21
CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 ( 319) 647 94.9 1.2e-19
CCDS35078.1 FOXE1 gene_id:2304|Hs108|chr9 ( 373) 608 89.9 4.3e-18
CCDS10959.1 FOXL1 gene_id:2300|Hs108|chr16 ( 345) 544 81.7 1.2e-15
CCDS10958.1 FOXC2 gene_id:2303|Hs108|chr16 ( 501) 538 81.1 2.6e-15
CCDS4473.1 FOXC1 gene_id:2296|Hs108|chr6 ( 553) 532 80.4 4.8e-15
CCDS32255.1 FOXB1 gene_id:27023|Hs108|chr15 ( 325) 521 78.7 9e-15
CCDS13192.1 FOXS1 gene_id:2307|Hs108|chr20 ( 330) 518 78.3 1.2e-14
CCDS3105.1 FOXL2 gene_id:668|Hs108|chr3 ( 376) 509 77.2 2.9e-14
CCDS10957.2 FOXF1 gene_id:2294|Hs108|chr16 ( 379) 500 76.1 6.4e-14
CCDS12677.1 FOXA3 gene_id:3171|Hs108|chr19 ( 350) 499 75.9 6.7e-14
CCDS35045.1 FOXB2 gene_id:442425|Hs108|chr9 ( 432) 486 74.3 2.4e-13
CCDS13147.1 FOXA2 gene_id:3170|Hs108|chr20 ( 457) 484 74.1 3e-13
CCDS46585.1 FOXA2 gene_id:3170|Hs108|chr20 ( 463) 484 74.1 3.1e-13
CCDS4472.1 FOXF2 gene_id:2295|Hs108|chr6 ( 444) 480 73.6 4.2e-13
CCDS77433.1 FOXI3 gene_id:344167|Hs108|chr2 ( 420) 476 73.0 5.8e-13
CCDS9665.1 FOXA1 gene_id:3169|Hs108|chr14 ( 472) 469 72.2 1.2e-12
CCDS4471.1 FOXQ1 gene_id:94234|Hs108|chr6 ( 403) 465 71.6 1.5e-12
CCDS7655.2 FOXI2 gene_id:399823|Hs108|chr10 ( 318) 455 70.2 3.2e-12
CCDS4372.1 FOXI1 gene_id:2299|Hs108|chr5 ( 378) 453 70.0 4.2e-12
CCDS9636.1 FOXG1 gene_id:2290|Hs108|chr14 ( 489) 442 68.8 1.3e-11
>>CCDS43826.1 FOXD4L6 gene_id:653404|Hs108|chr9 (417 aa)
initn: 3110 init1: 2988 opt: 2988 Z-score: 2089.4 bits: 395.6 E(32554): 4.6e-110
Smith-Waterman score: 2988; 99.8% identity (99.8% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KE3 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KE3 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS43 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC
370 380 390 400 410
>>CCDS43833.1 FOXD4L3 gene_id:286380|Hs108|chr9 (417 aa)
initn: 3076 init1: 2977 opt: 2977 Z-score: 2081.8 bits: 394.2 E(32554): 1.2e-109
Smith-Waterman score: 2977; 99.3% identity (99.8% similar) in 417 aa overlap (1-417:1-417)
10 20 30 40 50 60
pF1KE3 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS43 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS43 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRICPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KE3 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS43 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRPC
370 380 390 400 410
>>CCDS47977.1 FOXD4L5 gene_id:653427|Hs108|chr9 (416 aa)
initn: 2751 init1: 2751 opt: 2922 Z-score: 2043.7 bits: 387.1 E(32554): 1.6e-107
Smith-Waterman score: 2922; 98.1% identity (98.3% similar) in 417 aa overlap (1-417:1-416)
10 20 30 40 50 60
pF1KE3 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::::::::: : :::::::::::::
CCDS47 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
::::::::::::::::: :::::::::::::::::::::::::::::: :::::::::::
CCDS47 APPQPVPGAYPNTAPGRCPYALLHPHPLRYLLLSAPVYAGAPKKAEGADLATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KE3 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRRC
:::::.::::::::::: :::::::::::::: ::::::::::::::::::::::::
CCDS47 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRR-TAPTAALPPRARCWAGTCRPRRRC
370 380 390 400 410
>>CCDS75845.1 FOXD4L4 gene_id:349334|Hs108|chr9 (416 aa)
initn: 2749 init1: 2749 opt: 2920 Z-score: 2042.3 bits: 386.9 E(32554): 2e-107
Smith-Waterman score: 2920; 98.1% identity (98.3% similar) in 417 aa overlap (1-417:1-416)
10 20 30 40 50 60
pF1KE3 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::::::::: : :::::::::::::
CCDS75 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEARQQFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
::::::::::::::::::::::::::::::::::: :::::::::::: :::::::::::
CCDS75 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGADLATPAPFPCCS
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS75 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
310 320 330 340 350 360
370 380 390 400 410
pF1KE3 ACCIPRPLPLCCKCPPPPLLGQFCSNSSSIRRRTAPTAALPPRARCWAGTCRPRRRC
:::::.::::::::::: :::::::::::::: ::::::::::::::::::::::::
CCDS75 ACCIPKPLPLCCKCPPPLLLGQFCSNSSSIRR-TAPTAALPPRARCWAGTCRPRRRC
370 380 390 400 410
>>CCDS34975.1 FOXD4 gene_id:2298|Hs108|chr9 (439 aa)
initn: 2201 init1: 2201 opt: 2404 Z-score: 1683.9 bits: 320.6 E(32554): 1.8e-87
Smith-Waterman score: 2406; 87.4% identity (90.3% similar) in 404 aa overlap (1-395:1-400)
10 20 30 40 50 60
pF1KE3 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
:::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
CCDS34 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDE----EEAASQQFLEQSLQPGLQ
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
::::::::::::::::::::::::::::.::::::::::::::::::::: :::::::::
CCDS34 VARWGGVALPREHIEGGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPSSYIALITMA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
:::.::::::::::::::: ::::::::::::::::::::::::::::::::::.:::::
CCDS34 ILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGRPGKGN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
::::::::::::::::::::::::.::: ::::::::::::::::::::::.::::::::
CCDS34 YWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE3 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
:::::::::::::.::::::::::::: ::::::::.::::::::::: :::::::::::
CCDS34 APPQPVPGAYPNTGPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPAPFPCCS
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE3 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
::::::::::::::::::::::::::::: ::::::::::::::::::::::: ::::.:
CCDS34 PHLVLSLGRRARVWRRHREADASLSALRVSCKGSGERVQGLRRVCPRPRGATAPCSSDRQ
300 310 320 330 340 350
370 380 390 400 410
pF1KE3 ACCI-----PRPLPLCCK--CPPPP--LLGQFCSNSSSIRRRTAPTAALPPRARCWAGTC
:: : : : : .:: : .:.. : :
CCDS34 ACRTILQQQQRHQEEDCANGCAPTKGAVLGGHLSAASALLRYQAVAEGSGLTSLAAPLGG
360 370 380 390 400 410
pF1KE3 RPRRRC
CCDS34 EGTSPVFLVSPTPSSLAESAGPS
420 430
>>CCDS2117.1 FOXD4L1 gene_id:200350|Hs108|chr2 (408 aa)
initn: 2039 init1: 1515 opt: 1980 Z-score: 1390.0 bits: 266.2 E(32554): 4.2e-71
Smith-Waterman score: 1980; 93.7% identity (96.7% similar) in 303 aa overlap (1-303:1-302)
10 20 30 40 50 60
pF1KE3 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ
:::::::: ::::::::::::::::::::::::::::::::::: :::.:::::::::::
CCDS21 MNLPRAERPRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEEASQKFLEQSLQPGLQ
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMA
:::::::::::::::::: :::::::::.:::::::::::::::::::::::::::::::
CCDS21 VARWGGVALPREHIEGGG-PSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMA
70 80 90 100 110
130 140 150 160 170 180
pF1KE3 ILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGN
:::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS21 ILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGT
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPHPGPLLGAP
:::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::
CCDS21 YWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAP
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE3 APPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGAALATPAPFPCCS
: ::::::::::::::::::::::::: ::::::::.::::::::::: ::::. .: .
CCDS21 ALPQPVPGAYPNTAPGRRPYALLHPHPPRYLLLSAPAYAGAPKKAEGADLATPGTLPVLQ
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE3 PHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQ
: :
CCDS21 PSLGPQPWEEGKGLASPPGGGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCPLLQRPS
300 310 320 330 340 350
>>CCDS30708.1 FOXD2 gene_id:2306|Hs108|chr1 (495 aa)
initn: 772 init1: 695 opt: 767 Z-score: 547.3 bits: 110.5 E(32554): 3.7e-24
Smith-Waterman score: 783; 51.3% identity (65.2% similar) in 279 aa overlap (32-297:61-322)
10 20 30 40 50 60
pF1KE3 NLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQV
:: . : .:::::... . : . .
CCDS30 GGGSGGGELPARSGPRAPRDVLPHGHEPPAEEAEADLAEDEEESGGCSDGEPRALASRGA
40 50 60 70 80 90
70 80 90 100 110
pF1KE3 ARWGGVALP-REHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQP-AKPPYSYIALITM
: .: : .:..::. :. :: ..::. :.: .::::::::::::
CCDS30 AAAAGSPGPGAAAARGAAGPG-PG--------PPSGGAAT---RSPLVKPPYSYIALITM
100 110 120 130
120 130 140 150 160 170
pF1KE3 AILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKG
::::.:.:::::: :: ::::::::::.:::::::::::::::::::::::::::.::::
CCDS30 AILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKG
140 150 160 170 180 190
180 190 200 210 220 230
pF1KE3 NYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFP---LPAAHAALHNPH---P
:::.::: : :::::::::::::::::. : : ::: : : .. :: .: :
CCDS30 NYWTLDPESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLP
200 210 220 230 240 250
240 250 260 270 280
pF1KE3 G-PLLGAPAPPQ----PVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKAEGA
: :: . :. :: : :: :. :::: . . .: . : .. .
CCDS30 GFAAYGAYGYGYGLALPAYGAPP---PGPAPHP--HPHPHAFAFAAAAAAAPCQLSVPPG
260 270 280 290 300 310
290 300 310 320 330 340
pF1KE3 ALATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGSGERVQGLRRVCPRP
:.: : :
CCDS30 RAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSP
320 330 340 350 360 370
>>CCDS75259.1 FOXD1 gene_id:2297|Hs108|chr5 (465 aa)
initn: 760 init1: 660 opt: 756 Z-score: 539.9 bits: 109.1 E(32554): 9.4e-24
Smith-Waterman score: 791; 42.1% identity (58.7% similar) in 404 aa overlap (14-400:53-422)
10 20 30 40
pF1KE3 MNLPRAERLRSTPQRSLRDSDGEDGKIDVLGEEEDEDEVEDEE
.: :. ::: ... : ::::.:..
CCDS75 GEGEDEEDEEEEDDDEGGGGGPRLAVPAQRRRRRRSYAGED-ELEDLEEEEDDDDILLAP
30 40 50 60 70 80
50 60 70 80 90 100
pF1KE3 EAASQQFLEQSLQPGLQVARWGGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDA
:... :: : .:.. :::: . . :. :. :
CCDS75 PAGGSP-----APPGPAPAAGAGAG-------GGGGGGGAGGGGS----------AGSGA
90 100 110
110 120 130 140 150 160
pF1KE3 RQP-AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSL
..: .::::::::::::::::.:.:::::: :: ::::::::::.:::::::::::::::
CCDS75 KNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSL
120 130 140 150 160 170
170 180 190 200 210 220
pF1KE3 NDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTP-GAHLPHPFPL
::::::::::::.:::::::.::: : :::::::::::::::::. : : .: . . :
CCDS75 NDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLPPNAAAAESLLL
180 190 200 210 220 230
230 240 250 260 270
pF1KE3 PAAHAA--LHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYA
.: :: .: . : :::: : : :: : ::. . : . ..:
CCDS75 RGAGAAGGAGDPAAAAALFPPAPPPP-PHAY-----GYGPYGCGYGLQLPPYAPPSALFA
240 250 260 270 280 290
280 290 300 310 320 330
pF1KE3 GAPKKAEGAALATPAPFPCCSPHLVLS-LGRRARVWRRHREADASLSALRV-LCKGSGER
.: : .::. .: : :: . . :.: : .: : . : . : . :..:
CCDS75 AAAAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPG
300 310 320 330 340 350
340 350 360 370 380
pF1KE3 VQGLRR-------VCPRPRGATATCSSDHQACCI----PRPLPLCCKCPPPPLLGQFCSN
...: : . : .:. .. :: : : :. : : : :.
CCDS75 ASALARSPFSIESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAP-PAPGSSGGGCAA
360 370 380 390 400 410
390 400 410
pF1KE3 SSSIRRRTAPTAALPPRARCWAGTCRPRRRC
.... .:.:::
CCDS75 QAAV----GPAAALTRSLVAAAAAAASSVSSSAALGTLHQGTALSSVENFTARISNC
420 430 440 450 460
>>CCDS624.1 FOXD3 gene_id:27022|Hs108|chr1 (478 aa)
initn: 733 init1: 666 opt: 685 Z-score: 490.5 bits: 100.0 E(32554): 5.3e-21
Smith-Waterman score: 700; 48.5% identity (60.5% similar) in 299 aa overlap (18-303:38-314)
10 20 30 40
pF1KE3 MNLPRAERLRSTPQRSLRDSD-GED---GKIDVLGEEEDEDEVEDEE
.::: : : : .. .: :: .
CCDS62 SASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPH
10 20 30 40 50 60
50 60 70 80 90
pF1KE3 EAASQQFLEQSLQ-P----GLQVARWGGVALPR-EHIEGGGGPSDPSEFGTKFRAPPRSA
.. : .: : : : .. : :. :. . .:: : . . : : ::
CCDS62 HGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSA
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE3 ---AASEDARQPAKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQN
: :. . .::::::::::::::::.:.:.::::::: :::.::::::.:::::::
CCDS62 GGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE3 SIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAH
::::::::::::::::::::.:::::::.::: :.::::::::::::::::::: :
CCDS62 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQE---H
190 200 210 220 230 240
220 230 240 250 260 270
pF1KE3 LPHPFPLPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLS
: ..:: : : : :: ..: :::.: :: :
CCDS62 L-------REQTALMMQSFGAYSLAAAA-----GA---AGPYGRPYGL-HPAAAAGAY-S
250 260 270 280
280 290 300 310 320 330
pF1KE3 APVYAGAPKKAEGAALATPAPFPCCSPHLVLSLGRRARVWRRHREADASLSALRVLCKGS
: :.: : .::: : .: .: :
CCDS62 HP--AAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQL
290 300 310 320 330 340
>>CCDS550.1 FOXE3 gene_id:2301|Hs108|chr1 (319 aa)
initn: 592 init1: 552 opt: 647 Z-score: 466.2 bits: 94.9 E(32554): 1.2e-19
Smith-Waterman score: 647; 48.8% identity (62.3% similar) in 252 aa overlap (57-300:17-254)
30 40 50 60 70 80
pF1KE3 IDVLGEEEDEDEVEDEEEAASQQFLEQSLQPGLQ-VARWGGVALPREHIEGGGGPSDPSE
:.: :: : : : : : . .
CCDS55 MAGRSDMDPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAA
10 20 30 40
90 100 110 120 130 140
pF1KE3 FGTKFRAPPRSAAASEDARQP---AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRF
: :: . . .. :.: .::::::::::.::. . : .::::..: ::. ::
CCDS55 -GRGEAAPTPAPGPGRRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERF
50 60 70 80 90 100
150 160 170 180 190 200
pF1KE3 PYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRK
.:: . :::::::::.:::::::.:::::.:::::::.::::. :::::::::::::
CCDS55 AFYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRK
110 120 130 140 150 160
210 220 230 240 250 260
pF1KE3 RFKRHQLTP-GAHLPHPFPLPAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYA
:::: .: .: : : ::: .: . : ::: : .: ::. :: : :.:
CCDS55 RFKRAELPAHAAAAPGP-PLPFPYAP-YAPAPGPALLVP-PPSAGPGPSP---PAR----
170 180 190 200 210
270 280 290 300 310
pF1KE3 LLHPHPLRYLLLSAPVYAG--APKKAEGAAL-ATPAPFPCCSPHLVLSLGRRARVWRRHR
:. : : : :: ::. :: :. : :: :.
CCDS55 LFSVDSLVNL---QPELAGLGAPEPPCCAAPDAAAAAFPPCAAAASPPLYSQVPDRLVLP
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE3 EADASLSALRVLCKGSGERVQGLRRVCPRPRGATATCSSDHQACCIPRPLPLCCKCPPPP
CCDS55 ATRPGPGPLPAEPLLALAGPAAALGPLSPGEAYLRQPGFASGLERYL
280 290 300 310
417 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 10:53:53 2016 done: Sun Nov 6 10:53:53 2016
Total Scan time: 3.760 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]