Result of FASTA (omim) for
pFN21AE3660
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3660, 445 aa
1>>>pF1KE3660 445 - 445 aa - 445 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8377+/-0.000538; mu= 16.5353+/- 0.033
mean_var=153.4577+/-33.911, 0's: 0 Z-trim(112.7): 327 B-trim: 1544 in 2/48
Lambda= 0.103533
statistics sampled from 21263 (21674) to 21263 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.614), E-opt: 0.2 (0.254), width: 16
Scan time: 8.740
The best scores are: opt bits E(85289)
NP_037394 (OMIM: 610082) E3 ubiquitin-protein liga ( 445) 2942 452.1 1.4e-126
XP_016866278 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 432) 2747 422.9 8e-118
XP_005249090 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 264) 1769 276.5 5.6e-74
XP_005249089 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 390) 1455 229.9 9.4e-60
XP_016860089 (OMIM: 176878) PREDICTED: tyrosine-pr ( 926) 456 81.1 1.3e-14
NP_002821 (OMIM: 176878) tyrosine-protein phosphat ( 926) 456 81.1 1.3e-14
XP_016856092 (OMIM: 130500,611804) PREDICTED: prot ( 524) 446 79.3 2.6e-14
XP_016856089 (OMIM: 130500,611804) PREDICTED: prot ( 573) 446 79.4 2.8e-14
XP_016856088 (OMIM: 130500,611804) PREDICTED: prot ( 578) 446 79.4 2.8e-14
NP_004428 (OMIM: 130500,611804) protein 4.1 isofor ( 588) 446 79.4 2.8e-14
NP_001159479 (OMIM: 130500,611804) protein 4.1 iso ( 601) 446 79.4 2.8e-14
XP_016856087 (OMIM: 130500,611804) PREDICTED: prot ( 619) 446 79.4 2.9e-14
NP_976217 (OMIM: 130500,611804) protein 4.1 isofor ( 641) 446 79.4 3e-14
NP_001159478 (OMIM: 130500,611804) protein 4.1 iso ( 720) 446 79.5 3.2e-14
XP_016856080 (OMIM: 130500,611804) PREDICTED: prot ( 733) 446 79.5 3.2e-14
XP_005245831 (OMIM: 130500,611804) PREDICTED: prot ( 767) 446 79.5 3.3e-14
XP_016856085 (OMIM: 130500,611804) PREDICTED: prot ( 768) 446 79.5 3.3e-14
XP_011539267 (OMIM: 130500,611804) PREDICTED: prot ( 769) 446 79.5 3.3e-14
XP_005245830 (OMIM: 130500,611804) PREDICTED: prot ( 782) 446 79.6 3.3e-14
XP_005245829 (OMIM: 130500,611804) PREDICTED: prot ( 787) 446 79.6 3.4e-14
XP_016856084 (OMIM: 130500,611804) PREDICTED: prot ( 787) 446 79.6 3.4e-14
XP_016856083 (OMIM: 130500,611804) PREDICTED: prot ( 789) 446 79.6 3.4e-14
XP_005245826 (OMIM: 130500,611804) PREDICTED: prot ( 810) 446 79.6 3.4e-14
XP_005245825 (OMIM: 130500,611804) PREDICTED: prot ( 821) 446 79.6 3.4e-14
XP_011539266 (OMIM: 130500,611804) PREDICTED: prot ( 822) 446 79.6 3.4e-14
XP_011539265 (OMIM: 130500,611804) PREDICTED: prot ( 828) 446 79.6 3.5e-14
XP_005245822 (OMIM: 130500,611804) PREDICTED: prot ( 829) 446 79.6 3.5e-14
XP_005245821 (OMIM: 130500,611804) PREDICTED: prot ( 831) 446 79.6 3.5e-14
XP_016856075 (OMIM: 130500,611804) PREDICTED: prot ( 841) 446 79.6 3.5e-14
XP_005245820 (OMIM: 130500,611804) PREDICTED: prot ( 850) 446 79.6 3.5e-14
NP_001159477 (OMIM: 130500,611804) protein 4.1 iso ( 864) 446 79.6 3.5e-14
XP_005245818 (OMIM: 130500,611804) PREDICTED: prot ( 864) 446 79.6 3.5e-14
XP_006710502 (OMIM: 130500,611804) PREDICTED: prot ( 876) 446 79.6 3.6e-14
XP_005245817 (OMIM: 130500,611804) PREDICTED: prot ( 881) 446 79.6 3.6e-14
XP_011539264 (OMIM: 130500,611804) PREDICTED: prot ( 977) 446 79.7 3.8e-14
XP_016856074 (OMIM: 130500,611804) PREDICTED: prot ( 977) 446 79.7 3.8e-14
XP_005245814 (OMIM: 130500,611804) PREDICTED: prot ( 979) 446 79.7 3.8e-14
XP_011539263 (OMIM: 130500,611804) PREDICTED: prot ( 996) 446 79.7 3.9e-14
XP_011539262 (OMIM: 130500,611804) PREDICTED: prot ( 998) 446 79.7 3.9e-14
XP_005245810 (OMIM: 130500,611804) PREDICTED: prot (1014) 446 79.7 3.9e-14
XP_011539261 (OMIM: 130500,611804) PREDICTED: prot (1017) 446 79.7 3.9e-14
XP_011539260 (OMIM: 130500,611804) PREDICTED: prot (1018) 446 79.7 3.9e-14
XP_006710497 (OMIM: 130500,611804) PREDICTED: prot (1026) 446 79.7 3.9e-14
XP_011539258 (OMIM: 130500,611804) PREDICTED: prot (1031) 446 79.7 3.9e-14
XP_016856073 (OMIM: 130500,611804) PREDICTED: prot (1031) 446 79.7 3.9e-14
NP_001171868 (OMIM: 611730) band 4.1-like protein ( 505) 441 78.6 4.3e-14
NP_001171867 (OMIM: 611730) band 4.1-like protein ( 505) 441 78.6 4.3e-14
NP_001138840 (OMIM: 176877) tyrosine-protein phosp ( 868) 443 79.2 4.9e-14
XP_016870444 (OMIM: 176877) PREDICTED: tyrosine-pr ( 913) 443 79.2 5e-14
XP_006717262 (OMIM: 176877) PREDICTED: tyrosine-pr ( 913) 443 79.2 5e-14
>>NP_037394 (OMIM: 610082) E3 ubiquitin-protein ligase M (445 aa)
initn: 2942 init1: 2942 opt: 2942 Z-score: 2393.5 bits: 452.1 E(85289): 1.4e-126
Smith-Waterman score: 2942; 100.0% identity (100.0% similar) in 445 aa overlap (1-445:1-445)
10 20 30 40 50 60
pF1KE3 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RISQQMDGLAPYRLKLRVKFFVEPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 RISQQMDGLAPYRLKLRVKFFVEPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVELS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ALLAQTKFGDYNQNTAKYNYEELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQIVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 ALLAQTKFGDYNQNTAKYNYEELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQIVS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 AMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRIAYPVVQMATQSGKNVYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 AMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRIAYPVVQMATQSGKNVYLT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 VTKESGNSIVLLFKMISTRAASGLYRAITETHAFYRCDTVTSAVMMQYSRDLKGHLASLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 VTKESGNSIVLLFKMISTRAASGLYRAITETHAFYRCDTVTSAVMMQYSRDLKGHLASLF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 LNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHSPLKSSESSMNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 LNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHSPLKSSESSMNC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_037 SSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPV
370 380 390 400 410 420
430 440
pF1KE3 CRSRVEHVQHVYLPTHTSLLNLTVI
:::::::::::::::::::::::::
NP_037 CRSRVEHVQHVYLPTHTSLLNLTVI
430 440
>>XP_016866278 (OMIM: 610082) PREDICTED: E3 ubiquitin-pr (432 aa)
initn: 2744 init1: 2744 opt: 2747 Z-score: 2236.2 bits: 422.9 E(85289): 8e-118
Smith-Waterman score: 2747; 99.0% identity (99.3% similar) in 421 aa overlap (1-421:1-421)
10 20 30 40 50 60
pF1KE3 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RISQQMDGLAPYRLKLRVKFFVEPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RISQQMDGLAPYRLKLRVKFFVEPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVELS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ALLAQTKFGDYNQNTAKYNYEELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQIVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALLAQTKFGDYNQNTAKYNYEELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQIVS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 AMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRIAYPVVQMATQSGKNVYLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRIAYPVVQMATQSGKNVYLT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 VTKESGNSIVLLFKMISTRAASGLYRAITETHAFYRCDTVTSAVMMQYSRDLKGHLASLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VTKESGNSIVLLFKMISTRAASGLYRAITETHAFYRCDTVTSAVMMQYSRDLKGHLASLF
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 LNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHSPLKSSESSMNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHSPLKSSESSMNC
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_016 SSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQDELE
370 380 390 400 410 420
430 440
pF1KE3 CRSRVEHVQHVYLPTHTSLLNLTVI
:
XP_016 CNAGKFWGEVSP
430
>>XP_005249090 (OMIM: 610082) PREDICTED: E3 ubiquitin-pr (264 aa)
initn: 1769 init1: 1769 opt: 1769 Z-score: 1449.1 bits: 276.5 E(85289): 5.6e-74
Smith-Waterman score: 1769; 100.0% identity (100.0% similar) in 264 aa overlap (182-445:1-264)
160 170 180 190 200 210
pF1KE3 TLNSIVAKHKELEGTSQASAEYQVLQIVSAMENYGIEWHSVRDSEGQKLLIGVGPEGISI
::::::::::::::::::::::::::::::
XP_005 MENYGIEWHSVRDSEGQKLLIGVGPEGISI
10 20 30
220 230 240 250 260 270
pF1KE3 CKDDFSPINRIAYPVVQMATQSGKNVYLTVTKESGNSIVLLFKMISTRAASGLYRAITET
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CKDDFSPINRIAYPVVQMATQSGKNVYLTVTKESGNSIVLLFKMISTRAASGLYRAITET
40 50 60 70 80 90
280 290 300 310 320 330
pF1KE3 HAFYRCDTVTSAVMMQYSRDLKGHLASLFLNENINLGKKYVFDIKRTSKEVYDHARRALY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 HAFYRCDTVTSAVMMQYSRDLKGHLASLFLNENINLGKKYVFDIKRTSKEVYDHARRALY
100 110 120 130 140 150
340 350 360 370 380 390
pF1KE3 NAGVVDLVSRNNQSPSHSPLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NAGVVDLVSRNNQSPSHSPLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCC
160 170 180 190 200 210
400 410 420 430 440
pF1KE3 EEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYLPTHTSLLNLTVI
::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYLPTHTSLLNLTVI
220 230 240 250 260
>>XP_005249089 (OMIM: 610082) PREDICTED: E3 ubiquitin-pr (390 aa)
initn: 1477 init1: 1454 opt: 1455 Z-score: 1193.8 bits: 229.9 E(85289): 9.4e-60
Smith-Waterman score: 2487; 87.6% identity (87.6% similar) in 445 aa overlap (1-445:1-390)
10 20 30 40 50 60
pF1KE3 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 RISQQMDGLAPYRLKLRVKFFVEPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVELS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RISQQMDGLAPYRLKLRVKFFVEPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVELS
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ALLAQTKFGDYNQNTAKYNYEELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQIVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALLAQTKFGDYNQNTAKYNYEELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQIVS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 AMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRIAYPVVQMATQSGKNVYLT
:::::::::::::::::::::::::::::::::::::::::
XP_005 AMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINR-------------------
190 200 210 220
250 260 270 280 290 300
pF1KE3 VTKESGNSIVLLFKMISTRAASGLYRAITETHAFYRCDTVTSAVMMQYSRDLKGHLASLF
::::::::::::::::::::::::
XP_005 ------------------------------------CDTVTSAVMMQYSRDLKGHLASLF
230 240
310 320 330 340 350 360
pF1KE3 LNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHSPLKSSESSMNC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHSPLKSSESSMNC
250 260 270 280 290 300
370 380 390 400 410 420
pF1KE3 SSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPV
310 320 330 340 350 360
430 440
pF1KE3 CRSRVEHVQHVYLPTHTSLLNLTVI
:::::::::::::::::::::::::
XP_005 CRSRVEHVQHVYLPTHTSLLNLTVI
370 380 390
>>XP_016860089 (OMIM: 176878) PREDICTED: tyrosine-protei (926 aa)
initn: 282 init1: 142 opt: 456 Z-score: 383.2 bits: 81.1 E(85289): 1.3e-14
Smith-Waterman score: 456; 31.2% identity (64.2% similar) in 285 aa overlap (1-278:29-311)
10 20 30
pF1KE3 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCR
..: . : ... .:. . .:. :. : .
XP_016 MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNKHDQGQVLLDVVFK
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE3 RLGIIEVDYFGLQFTG-SKGESLWLNLRNRISQQMDGLAPYRLKLRVKFFV-EPHLILQE
.: . : ::::::.. : . ::. . : .:. .:: :..:::::: .:. . .:
XP_016 HLDLTEQDYFGLQLADDSTDNPRWLDPNKPIRKQLKRGSPYSLNFRVKFFVSDPNKLQEE
70 80 90 100 110 120
100 110 120 130 140
pF1KE3 QTRHIFFLHIKEALLAGHLLCSPEQAVELSALLAQTKFGDYNQ--NTAKYNYEELCAKEL
::. .::.::. .:.:.: : . :. :... .:...:::.: : . : . .
XP_016 YTRYQYFLQIKQDILTGRLPCPSNTAALLASFAVQSELGDYDQSENLSGYLSDYSFIPNQ
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE3 SSATLNSIVAKHKELEGTSQASAEYQVLQIVSAMENYGIEWHSVRDSEGQKLLIGVGPEG
. . :. :.. : : : ::.. :. . ..: ::.:.: .::. .....::: :
XP_016 PQDFEKEIAKLHQQHIGLSPAEAEFNYLNTARTLELYGVEFHYARDQSNNEIMIGVMSGG
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE3 ISICKDDFSPINRIAY-PVVQMATQSGKNVYLTVTKESGNS--IVLLFKMISTRAASGLY
: : :. .: . . .:... . :. .. . :: .: .: :.:.. :: ..:.
XP_016 ILIYKNRVR-MNTFPWLKIVKISFKC-KQFFIQLRKELHESRETLLGFNMVNYRACKNLW
250 260 270 280 290
270 280 290 300 310 320
pF1KE3 RAITETHAFYRCDTVTSAVMMQYSRDLKGHLASLFLNENINLGKKYVFDIKRTSKEVYDH
.: .: :.:.: :
XP_016 KACVEHHTFFRLDRPLPPQKNFFAHYFTLGSKFRYCGRTEVQSVQYGKEKANKDRVFARS
300 310 320 330 340 350
>>NP_002821 (OMIM: 176878) tyrosine-protein phosphatase (926 aa)
initn: 282 init1: 142 opt: 456 Z-score: 383.2 bits: 81.1 E(85289): 1.3e-14
Smith-Waterman score: 456; 31.2% identity (64.2% similar) in 285 aa overlap (1-278:29-311)
10 20 30
pF1KE3 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCR
..: . : ... .:. . .:. :. : .
NP_002 MTSRFRLPAGRTYNVRASELARDRQHTEVVCNILLLDNTVQAFKVNKHDQGQVLLDVVFK
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE3 RLGIIEVDYFGLQFTG-SKGESLWLNLRNRISQQMDGLAPYRLKLRVKFFV-EPHLILQE
.: . : ::::::.. : . ::. . : .:. .:: :..:::::: .:. . .:
NP_002 HLDLTEQDYFGLQLADDSTDNPRWLDPNKPIRKQLKRGSPYSLNFRVKFFVSDPNKLQEE
70 80 90 100 110 120
100 110 120 130 140
pF1KE3 QTRHIFFLHIKEALLAGHLLCSPEQAVELSALLAQTKFGDYNQ--NTAKYNYEELCAKEL
::. .::.::. .:.:.: : . :. :... .:...:::.: : . : . .
NP_002 YTRYQYFLQIKQDILTGRLPCPSNTAALLASFAVQSELGDYDQSENLSGYLSDYSFIPNQ
130 140 150 160 170 180
150 160 170 180 190 200
pF1KE3 SSATLNSIVAKHKELEGTSQASAEYQVLQIVSAMENYGIEWHSVRDSEGQKLLIGVGPEG
. . :. :.. : : : ::.. :. . ..: ::.:.: .::. .....::: :
NP_002 PQDFEKEIAKLHQQHIGLSPAEAEFNYLNTARTLELYGVEFHYARDQSNNEIMIGVMSGG
190 200 210 220 230 240
210 220 230 240 250 260
pF1KE3 ISICKDDFSPINRIAY-PVVQMATQSGKNVYLTVTKESGNS--IVLLFKMISTRAASGLY
: : :. .: . . .:... . :. .. . :: .: .: :.:.. :: ..:.
NP_002 ILIYKNRVR-MNTFPWLKIVKISFKC-KQFFIQLRKELHESRETLLGFNMVNYRACKNLW
250 260 270 280 290
270 280 290 300 310 320
pF1KE3 RAITETHAFYRCDTVTSAVMMQYSRDLKGHLASLFLNENINLGKKYVFDIKRTSKEVYDH
.: .: :.:.: :
NP_002 KACVEHHTFFRLDRPLPPQKNFFAHYFTLGSKFRYCGRTEVQSVQYGKEKANKDRVFARS
300 310 320 330 340 350
>>XP_016856092 (OMIM: 130500,611804) PREDICTED: protein (524 aa)
initn: 370 init1: 211 opt: 446 Z-score: 377.9 bits: 79.3 E(85289): 2.6e-14
Smith-Waterman score: 446; 26.0% identity (61.8% similar) in 361 aa overlap (1-350:1-353)
10 20 30 40 50 60
pF1KE3 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN
: : :. : ...: :: .:.:.: :..::..:...: ::::: . . . ::. .
XP_016 MHCKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDNATSKTWLDSAK
10 20 30 40 50 60
70 80 90 100 110
pF1KE3 RISQQMDGLAPYRLKLRVKFFV-EPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVEL
.:..:. :. :. . . :::. .: . .. ::. . :.... ..::.: :: . :
XP_016 EIKKQVRGV-PWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALL
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 SALLAQTKFGDYNQNTAKYNY--EELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQ
.. :...:::. . .: . : . .. .... :: .. . :.:. . :.
XP_016 GSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IVSAMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRIAYPVVQMATQSGKNV
.. . ::.. :...: :: ...:: :. . :: . :::. .: : . . ..
XP_016 NAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLR-INRFPWPKVLKISYKRSSF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 YLTVT---KESGNSIVLLFKMISTRAASGLYRAITETHAFYR---CDTVTSAVMMQYSRD
.. . .:. .: . ::. : :::. :... .: :.:.: ::. .. .. .
XP_016 FIKIRPGEQEQYESTIG-FKLPSYRAAKKLWKVCVEHHTFFRLTSTDTIPKSKFLALGSK
240 250 260 270 280 290
300 310 320 330 340
pF1KE3 LK--GHLASLFLNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHS
.. :. . . : . . ..::... .: :.: .:..:: ..:. . :. .
XP_016 FRYSGRTQAQ-TRQASALIDRPAPHFERTASK---RASRSLDGAAAVDSADRSPR-PTSA
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE3 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE
:
XP_016 PAITQGQVAEGGVLDASAKKTVVPKAQKETVKAEVKKEDEPPEQAEPEPTEAWKDLDKSQ
360 370 380 390 400 410
>>XP_016856089 (OMIM: 130500,611804) PREDICTED: protein (573 aa)
initn: 370 init1: 211 opt: 446 Z-score: 377.4 bits: 79.4 E(85289): 2.8e-14
Smith-Waterman score: 446; 26.0% identity (61.8% similar) in 361 aa overlap (1-350:1-353)
10 20 30 40 50 60
pF1KE3 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN
: : :. : ...: :: .:.:.: :..::..:...: ::::: . . . ::. .
XP_016 MHCKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDNATSKTWLDSAK
10 20 30 40 50 60
70 80 90 100 110
pF1KE3 RISQQMDGLAPYRLKLRVKFFV-EPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVEL
.:..:. :. :. . . :::. .: . .. ::. . :.... ..::.: :: . :
XP_016 EIKKQVRGV-PWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALL
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 SALLAQTKFGDYNQNTAKYNY--EELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQ
.. :...:::. . .: . : . .. .... :: .. . :.:. . :.
XP_016 GSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IVSAMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRIAYPVVQMATQSGKNV
.. . ::.. :...: :: ...:: :. . :: . :::. .: : . . ..
XP_016 NAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLR-INRFPWPKVLKISYKRSSF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 YLTVT---KESGNSIVLLFKMISTRAASGLYRAITETHAFYR---CDTVTSAVMMQYSRD
.. . .:. .: . ::. : :::. :... .: :.:.: ::. .. .. .
XP_016 FIKIRPGEQEQYESTIG-FKLPSYRAAKKLWKVCVEHHTFFRLTSTDTIPKSKFLALGSK
240 250 260 270 280 290
300 310 320 330 340
pF1KE3 LK--GHLASLFLNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHS
.. :. . . : . . ..::... .: :.: .:..:: ..:. . :. .
XP_016 FRYSGRTQAQ-TRQASALIDRPAPHFERTASK---RASRSLDGAAAVDSADRSPR-PTSA
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE3 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE
:
XP_016 PAITQGQVAEGGVLDASAKKTVVPKAQKETVKAEVKKEDEPPEQAEPEPTEAWKVEKTHI
360 370 380 390 400 410
>>XP_016856088 (OMIM: 130500,611804) PREDICTED: protein (578 aa)
initn: 370 init1: 211 opt: 446 Z-score: 377.4 bits: 79.4 E(85289): 2.8e-14
Smith-Waterman score: 446; 26.0% identity (61.8% similar) in 361 aa overlap (1-350:1-353)
10 20 30 40 50 60
pF1KE3 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN
: : :. : ...: :: .:.:.: :..::..:...: ::::: . . . ::. .
XP_016 MHCKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDNATSKTWLDSAK
10 20 30 40 50 60
70 80 90 100 110
pF1KE3 RISQQMDGLAPYRLKLRVKFFV-EPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVEL
.:..:. :. :. . . :::. .: . .. ::. . :.... ..::.: :: . :
XP_016 EIKKQVRGV-PWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALL
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 SALLAQTKFGDYNQNTAKYNY--EELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQ
.. :...:::. . .: . : . .. .... :: .. . :.:. . :.
XP_016 GSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IVSAMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRIAYPVVQMATQSGKNV
.. . ::.. :...: :: ...:: :. . :: . :::. .: : . . ..
XP_016 NAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLR-INRFPWPKVLKISYKRSSF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 YLTVT---KESGNSIVLLFKMISTRAASGLYRAITETHAFYR---CDTVTSAVMMQYSRD
.. . .:. .: . ::. : :::. :... .: :.:.: ::. .. .. .
XP_016 FIKIRPGEQEQYESTIG-FKLPSYRAAKKLWKVCVEHHTFFRLTSTDTIPKSKFLALGSK
240 250 260 270 280 290
300 310 320 330 340
pF1KE3 LK--GHLASLFLNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHS
.. :. . . : . . ..::... .: :.: .:..:: ..:. . :. .
XP_016 FRYSGRTQAQ-TRQASALIDRPAPHFERTASK---RASRSLDGAAAVDSADRSPR-PTSA
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE3 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE
:
XP_016 PAITQGQVAEGGVLDASAKKTVVPKAQKETVKAEVKKEDEPPEQAEPEPTEAWKVEKTHI
360 370 380 390 400 410
>>NP_004428 (OMIM: 130500,611804) protein 4.1 isoform 6 (588 aa)
initn: 370 init1: 211 opt: 446 Z-score: 377.3 bits: 79.4 E(85289): 2.8e-14
Smith-Waterman score: 446; 26.0% identity (61.8% similar) in 361 aa overlap (1-350:1-353)
10 20 30 40 50 60
pF1KE3 MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRN
: : :. : ...: :: .:.:.: :..::..:...: ::::: . . . ::. .
NP_004 MHCKVSLLDDTVYECVVEKHAKGQDLLKRVCEHLNLLEEDYFGLAIWDNATSKTWLDSAK
10 20 30 40 50 60
70 80 90 100 110
pF1KE3 RISQQMDGLAPYRLKLRVKFFV-EPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVEL
.:..:. :. :. . . :::. .: . .. ::. . :.... ..::.: :: . :
NP_004 EIKKQVRGV-PWNFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALL
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 SALLAQTKFGDYNQNTAKYNY--EELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQ
.. :...:::. . .: . : . .. .... :: .. . :.:. . :.
NP_004 GSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLEFLE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IVSAMENYGIEWHSVRDSEGQKLLIGVGPEGISICKDDFSPINRIAYPVVQMATQSGKNV
.. . ::.. :...: :: ...:: :. . :: . :::. .: : . . ..
NP_004 NAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLR-INRFPWPKVLKISYKRSSF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 YLTVT---KESGNSIVLLFKMISTRAASGLYRAITETHAFYR---CDTVTSAVMMQYSRD
.. . .:. .: . ::. : :::. :... .: :.:.: ::. .. .. .
NP_004 FIKIRPGEQEQYESTIG-FKLPSYRAAKKLWKVCVEHHTFFRLTSTDTIPKSKFLALGSK
240 250 260 270 280 290
300 310 320 330 340
pF1KE3 LK--GHLASLFLNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHS
.. :. . . : . . ..::... .: :.: .:..:: ..:. . :. .
NP_004 FRYSGRTQAQ-TRQASALIDRPAPHFERTASK---RASRSLDGAAAVDSADRSPR-PTSA
300 310 320 330 340 350
350 360 370 380 390 400
pF1KE3 PLKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCE
:
NP_004 PAITQGQVAEGGVLDASAKKTVVPKAQKETVKAEVKKEDEPPEQAEPEPTEAWKKKRERL
360 370 380 390 400 410
445 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 23:22:12 2016 done: Sun Nov 6 23:22:14 2016
Total Scan time: 8.740 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]