Result of FASTA (omim) for
pFN21AE3654
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3654, 244 aa
1>>>pF1KE3654 244 - 244 aa - 244 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1873+/-0.000324; mu= 15.0194+/- 0.020
mean_var=66.2186+/-13.542, 0's: 0 Z-trim(116.1): 304 B-trim: 1565 in 3/53
Lambda= 0.157610
statistics sampled from 26758 (27083) to 26758 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.318), width: 16
Scan time: 6.730
The best scores are: opt bits E(85289)
NP_002765 (OMIM: 602652) kallikrein-6 isoform A pr ( 244) 1716 398.6 5e-111
NP_001012982 (OMIM: 602652) kallikrein-6 isoform A ( 244) 1716 398.6 5e-111
NP_001306878 (OMIM: 602652) kallikrein-6 isoform B ( 137) 986 232.5 2.9e-61
NP_001306877 (OMIM: 602652) kallikrein-6 isoform B ( 137) 986 232.5 2.9e-61
NP_001012983 (OMIM: 602652) kallikrein-6 isoform B ( 137) 986 232.5 2.9e-61
NP_009127 (OMIM: 605644) kallikrein-8 isoform 1 pr ( 260) 827 196.5 3.8e-50
NP_056411 (OMIM: 605505) kallikrein-13 precursor [ ( 277) 822 195.4 8.7e-50
NP_071329 (OMIM: 606135) kallikrein-14 preproprote ( 267) 817 194.2 1.9e-49
NP_001298111 (OMIM: 606135) kallikrein-14 prepropr ( 267) 817 194.2 1.9e-49
NP_653088 (OMIM: 605644) kallikrein-8 isoform 2 pr ( 305) 808 192.2 8.6e-49
NP_006844 (OMIM: 604434) kallikrein-11 isoform 1 p ( 250) 791 188.3 1.1e-47
NP_001129504 (OMIM: 604434) kallikrein-11 isoform ( 250) 791 188.3 1.1e-47
NP_659196 (OMIM: 604434) kallikrein-11 isoform 2 [ ( 282) 791 188.3 1.2e-47
XP_011525004 (OMIM: 605643) PREDICTED: kallikrein- ( 293) 772 184.0 2.4e-46
NP_001070959 (OMIM: 605643) kallikrein-5 prepropro ( 293) 772 184.0 2.4e-46
NP_036559 (OMIM: 605643) kallikrein-5 preproprotei ( 293) 772 184.0 2.4e-46
NP_001070960 (OMIM: 605643) kallikrein-5 prepropro ( 293) 772 184.0 2.4e-46
XP_011525005 (OMIM: 605643) PREDICTED: kallikrein- ( 293) 772 184.0 2.4e-46
NP_665901 (OMIM: 605539) kallikrein-12 isoform 2 p ( 248) 755 180.1 3.1e-45
NP_002760 (OMIM: 167800,276000,614044) trypsin-1 p ( 247) 726 173.5 3e-43
NP_062544 (OMIM: 605539) kallikrein-12 isoform 1 p ( 254) 723 172.9 4.9e-43
XP_011514713 (OMIM: 167800,276000,614044) PREDICTE ( 472) 726 173.7 5e-43
NP_005037 (OMIM: 604438) kallikrein-7 isoform 1 pr ( 253) 720 172.2 7.8e-43
NP_644806 (OMIM: 604438) kallikrein-7 isoform 1 pr ( 253) 720 172.2 7.8e-43
NP_036447 (OMIM: 605504) kallikrein-9 precursor [H ( 250) 708 169.4 5.1e-42
NP_002761 (OMIM: 167800,601564) trypsin-2 isoform ( 247) 702 168.1 1.3e-41
NP_002762 (OMIM: 613578) trypsin-3 isoform 2 prepr ( 247) 692 165.8 6.3e-41
NP_001184026 (OMIM: 613578) trypsin-3 isoform 3 pr ( 261) 684 164.0 2.3e-40
NP_001184027 (OMIM: 613578) trypsin-3 isoform 4 pr ( 240) 680 163.1 4.1e-40
NP_031369 (OMIM: 613578) trypsin-3 isoform 1 prepr ( 304) 681 163.4 4.2e-40
XP_011516267 (OMIM: 613578) PREDICTED: trypsin-3 i ( 333) 681 163.4 4.6e-40
NP_004908 (OMIM: 204700,603767) kallikrein-4 isofo ( 254) 679 162.9 5e-40
XP_005259118 (OMIM: 602673) PREDICTED: kallikrein- ( 276) 624 150.4 3.1e-36
XP_006723352 (OMIM: 602673) PREDICTED: kallikrein- ( 276) 624 150.4 3.1e-36
XP_016882482 (OMIM: 602673) PREDICTED: kallikrein- ( 276) 624 150.4 3.1e-36
XP_006723350 (OMIM: 602673) PREDICTED: kallikrein- ( 276) 624 150.4 3.1e-36
NP_665895 (OMIM: 602673) kallikrein-10 preproprote ( 276) 624 150.4 3.1e-36
NP_002767 (OMIM: 602673) kallikrein-10 preproprote ( 276) 624 150.4 3.1e-36
NP_001070968 (OMIM: 602673) kallikrein-10 prepropr ( 276) 624 150.4 3.1e-36
XP_005259119 (OMIM: 602673) PREDICTED: kallikrein- ( 276) 624 150.4 3.1e-36
NP_001919 (OMIM: 134350,613912) complement factor ( 253) 605 146.0 5.8e-35
NP_001304264 (OMIM: 134350,613912) complement fact ( 260) 602 145.4 9.5e-35
NP_001161077 (OMIM: 604434) kallikrein-11 isoform ( 275) 598 144.5 1.9e-34
XP_011524673 (OMIM: 604434) PREDICTED: kallikrein- ( 275) 598 144.5 1.9e-34
XP_011524672 (OMIM: 604434) PREDICTED: kallikrein- ( 275) 598 144.5 1.9e-34
XP_011524675 (OMIM: 604434) PREDICTED: kallikrein- ( 275) 598 144.5 1.9e-34
XP_011524674 (OMIM: 604434) PREDICTED: kallikrein- ( 275) 598 144.5 1.9e-34
XP_011524671 (OMIM: 604434) PREDICTED: kallikrein- ( 307) 598 144.5 2e-34
NP_001290343 (OMIM: 167800,601564) trypsin-2 isofo ( 261) 534 129.9 4.3e-30
NP_001268360 (OMIM: 605644) kallikrein-8 isoform 5 ( 139) 523 127.2 1.5e-29
>>NP_002765 (OMIM: 602652) kallikrein-6 isoform A prepro (244 aa)
initn: 1716 init1: 1716 opt: 1716 Z-score: 2114.2 bits: 398.6 E(85289): 5e-111
Smith-Waterman score: 1716; 100.0% identity (100.0% similar) in 244 aa overlap (1-244:1-244)
10 20 30 40 50 60
pF1KE3 MKKLMVVLSLIAAAWAEEQNKLVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MKKLMVVLSLIAAAWAEEQNKLVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 AHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LIQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LIQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKT
190 200 210 220 230 240
pF1KE3 IQAK
::::
NP_002 IQAK
>>NP_001012982 (OMIM: 602652) kallikrein-6 isoform A pre (244 aa)
initn: 1716 init1: 1716 opt: 1716 Z-score: 2114.2 bits: 398.6 E(85289): 5e-111
Smith-Waterman score: 1716; 100.0% identity (100.0% similar) in 244 aa overlap (1-244:1-244)
10 20 30 40 50 60
pF1KE3 MKKLMVVLSLIAAAWAEEQNKLVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MKKLMVVLSLIAAAWAEEQNKLVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LIQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LIQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKT
190 200 210 220 230 240
pF1KE3 IQAK
::::
NP_001 IQAK
>>NP_001306878 (OMIM: 602652) kallikrein-6 isoform B [Ho (137 aa)
initn: 986 init1: 986 opt: 986 Z-score: 1220.8 bits: 232.5 E(85289): 2.9e-61
Smith-Waterman score: 986; 100.0% identity (100.0% similar) in 137 aa overlap (108-244:1-137)
80 90 100 110 120 130
pF1KE3 RQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSANTTS
::::::::::::::::::::::::::::::
NP_001 MLLRLARPAKLSELIQPLPLERDCSANTTS
10 20 30
140 150 160 170 180 190
pF1KE3 CHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDS
40 50 60 70 80 90
200 210 220 230 240
pF1KE3 GGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQAK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQAK
100 110 120 130
>>NP_001306877 (OMIM: 602652) kallikrein-6 isoform B [Ho (137 aa)
initn: 986 init1: 986 opt: 986 Z-score: 1220.8 bits: 232.5 E(85289): 2.9e-61
Smith-Waterman score: 986; 100.0% identity (100.0% similar) in 137 aa overlap (108-244:1-137)
80 90 100 110 120 130
pF1KE3 RQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSANTTS
::::::::::::::::::::::::::::::
NP_001 MLLRLARPAKLSELIQPLPLERDCSANTTS
10 20 30
140 150 160 170 180 190
pF1KE3 CHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDS
40 50 60 70 80 90
200 210 220 230 240
pF1KE3 GGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQAK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQAK
100 110 120 130
>>NP_001012983 (OMIM: 602652) kallikrein-6 isoform B [Ho (137 aa)
initn: 986 init1: 986 opt: 986 Z-score: 1220.8 bits: 232.5 E(85289): 2.9e-61
Smith-Waterman score: 986; 100.0% identity (100.0% similar) in 137 aa overlap (108-244:1-137)
80 90 100 110 120 130
pF1KE3 RQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQPLPLERDCSANTTS
::::::::::::::::::::::::::::::
NP_001 MLLRLARPAKLSELIQPLPLERDCSANTTS
10 20 30
140 150 160 170 180 190
pF1KE3 CHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDS
40 50 60 70 80 90
200 210 220 230 240
pF1KE3 GGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQAK
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GGPLVCGDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQAK
100 110 120 130
>>NP_009127 (OMIM: 605644) kallikrein-8 isoform 1 prepro (260 aa)
initn: 753 init1: 278 opt: 827 Z-score: 1021.3 bits: 196.5 E(85289): 3.8e-50
Smith-Waterman score: 827; 45.8% identity (73.7% similar) in 251 aa overlap (3-244:10-259)
10 20 30 40
pF1KE3 MKKLMVVLSLIAAAWA----EEQNKLVHGGPCDKTSHPYQAALYTSGHLLCGG
: . : :...::: ...:.. : :. :.:.::::. . .:::::
NP_009 MGRPRPRAAKTWMFLLLLGGAWAGHSRAQEDKVLGGHECQPHSQPWQAALFQGQQLLCGG
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 VLIHPLWVLTAAHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVIHPDY---DAASHDQD
::. :::::::::::. : :: :.:..... ... ::... :: : :. .:..:
NP_009 VLVGGNWVLTAAHCKKPKYTVRLGDHSLQNKDGPEQEIPVVQSIPHPCYNSSDVEDHNHD
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 IMLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTADG--DFPDTIQCAYIHLVS
.:::.: :.:. ..:. : :. .: . ::: ... .::::..:: ...
NP_009 LMLLQLRDQASLGSKVKPISLADHCTQPGQKCTVSGWGTVTSPRENFPDTLNCAEVKIFP
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE3 REECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCGSKEKP
...:: :::::::..:.:::. : : :.::::::::::: :.:..:::. ::: ..::
NP_009 QKKCEDAYPGQITDGMVCAGSSK-GADTCQGDSGGPLVCDGALQGITSWGSDPCGRSDKP
190 200 210 220 230
230 240
pF1KE3 GVYTNVCRYTNWIQKTIQAK
:::::.::: .::.: : .:
NP_009 GVYTNICRYLDWIKKIIGSKG
240 250 260
>>NP_056411 (OMIM: 605505) kallikrein-13 precursor [Homo (277 aa)
initn: 794 init1: 416 opt: 822 Z-score: 1014.8 bits: 195.4 E(85289): 8.7e-50
Smith-Waterman score: 822; 52.4% identity (77.3% similar) in 225 aa overlap (25-242:39-263)
10 20 30 40 50
pF1KE3 MKKLMVVLSLIAAAWAEEQNKLVHGGPCDKTSHPYQAALYTSGHLLCGGVLIHP
: : :.:.:::: ..:.:::::::.::
NP_056 ASLTLALSGGVSQESSKVLNTNGTSGFLPGGYTCFPHSQPWQAALLVQGRLLCGGVLVHP
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 LWVLTAAHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAA----SHDQDIMLL
:::::::: : .:.:.:::: : . :.... ::... ::.: . .::.:::::
NP_056 KWVLTAAHCLKEGLKVYLGKHALGRVEAGEQVREVVHSIPHPEYRRSPTHLNHDHDIMLL
70 80 90 100 110 120
120 130 140 150 160
pF1KE3 RLARPAKLSELIQPLPLERDCSANT-TSCHILGWGKTADG--DFPDTIQCAYIHLVSREE
.: :..:. :: ::: .. . :.:.. ::: :.. ..: :.::: :.: : ::
NP_056 ELQSPVQLTGYIQTLPLSHNNRLTPGTTCRVSGWGTTTSPQVNYPKTLQCANIQLRSDEE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE3 CEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCGSKEKPGVY
:...:::.::.:::::: .. :::::.:::::::::. : :.::::..:::. ..::::
NP_056 CRQVYPGKITDNMLCAGTKEGGKDSCEGDSGGPLVCNRTLYGIVSWGDFPCGQPDRPGVY
190 200 210 220 230 240
230 240
pF1KE3 TNVCRYTNWIQKTIQAK
: : ::. ::..::.
NP_056 TRVSRYVLWIRETIRKYETQQQKWLKGPQ
250 260 270
>>NP_071329 (OMIM: 606135) kallikrein-14 preproprotein [ (267 aa)
initn: 804 init1: 379 opt: 817 Z-score: 1008.9 bits: 194.2 E(85289): 1.9e-49
Smith-Waterman score: 817; 46.0% identity (75.0% similar) in 248 aa overlap (4-244:20-267)
10 20 30 40
pF1KE3 MKKLMVVLSLIAAAWA---EEQNKLVHGGPCDKTSHPYQAALYT
:...:...: : . :..::.. : : ..:.:.:::: .
NP_071 MSLRVLGSGTWPSAPKMFLLLTALQVLAIAMTQSQEDENKIIGGHTCTRSSQPWQAALLA
10 20 30 40 50 60
50 60 70 80 90
pF1KE3 SGH--LLCGGVLIHPLWVLTAAHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYD
. . .::::.:. ::.::::: .: ::: :::::::. :..:. ::: : ::.:.
NP_071 GPRRRFLCGGALLSGQWVITAAHCGRPILQVALGKHNLRRWEATQQVLRVVRQVTHPNYN
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE3 AASHDQDIMLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTAD--GDFPDTIQC
. .::.:.:::.: .::.... ..:. . . :.. :::.. ::: .. . .: ..::
NP_071 SRTHDNDLMLLQLQQPARIGRAVRPIEVTQACASPGTSCRVSGWGTISSPIARYPASLQC
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE3 AYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIP
. :.. : :..::: :: .:.::: . ::::::::::::::: .:.::::::
NP_071 VNINISPDEVCQKAYPRTITPGMVCAGVPQGGKDSCQGDSGGPLVCRGQLQGLVSWGMER
190 200 210 220 230 240
220 230 240
pF1KE3 CGSKEKPGVYTNVCRYTNWIQKTIQAK
:. ::::::.:.: .::..:.. :
NP_071 CALPGYPGVYTNLCKYRSWIEETMRDK
250 260
>>NP_001298111 (OMIM: 606135) kallikrein-14 preproprotei (267 aa)
initn: 804 init1: 379 opt: 817 Z-score: 1008.9 bits: 194.2 E(85289): 1.9e-49
Smith-Waterman score: 817; 46.0% identity (75.0% similar) in 248 aa overlap (4-244:20-267)
10 20 30 40
pF1KE3 MKKLMVVLSLIAAAWA---EEQNKLVHGGPCDKTSHPYQAALYT
:...:...: : . :..::.. : : ..:.:.:::: .
NP_001 MSLRVLGSGTWPSAPKMFLLLTALQVLAIAMTQSQEDENKIIGGHTCTRSSQPWQAALLA
10 20 30 40 50 60
50 60 70 80 90
pF1KE3 SGH--LLCGGVLIHPLWVLTAAHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYD
. . .::::.:. ::.::::: .: ::: :::::::. :..:. ::: : ::.:.
NP_001 GPRRRFLCGGALLSGQWVITAAHCGRPILQVALGKHNLRRWEATQQVLRVVRQVTHPNYN
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE3 AASHDQDIMLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTAD--GDFPDTIQC
. .::.:.:::.: .::.... ..:. . . :.. :::.. ::: .. . .: ..::
NP_001 SRTHDNDLMLLQLQQPARIGRAVRPIEVTQACASPGTSCRVSGWGTISSPIARYPASLQC
130 140 150 160 170 180
160 170 180 190 200 210
pF1KE3 AYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIP
. :.. : :..::: :: .:.::: . ::::::::::::::: .:.::::::
NP_001 VNINISPDEVCQKAYPRTITPGMVCAGVPQGGKDSCQGDSGGPLVCRGQLQGLVSWGMER
190 200 210 220 230 240
220 230 240
pF1KE3 CGSKEKPGVYTNVCRYTNWIQKTIQAK
:. ::::::.:.: .::..:.. :
NP_001 CALPGYPGVYTNLCKYRSWIEETMRDK
250 260
>>NP_653088 (OMIM: 605644) kallikrein-8 isoform 2 precur (305 aa)
initn: 753 init1: 278 opt: 808 Z-score: 997.0 bits: 192.2 E(85289): 8.6e-49
Smith-Waterman score: 808; 47.0% identity (75.4% similar) in 232 aa overlap (18-244:74-304)
10 20 30 40
pF1KE3 MKKLMVVLSLIAAAWAEEQNKLVHGGPCDKTSHPYQAALYTSGHLLC
...:.. : :. :.:.::::. . .:::
NP_653 LNPQWPSQPSHCPRGWRSNPLPPAAGHSRAQEDKVLGGHECQPHSQPWQAALFQGQQLLC
50 60 70 80 90 100
50 60 70 80 90 100
pF1KE3 GGVLIHPLWVLTAAHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVIHPDY---DAASHD
::::. :::::::::::. : :: :.:..... ... ::... :: : :. .:.
NP_653 GGVLVGGNWVLTAAHCKKPKYTVRLGDHSLQNKDGPEQEIPVVQSIPHPCYNSSDVEDHN
110 120 130 140 150 160
110 120 130 140 150 160
pF1KE3 QDIMLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTADG--DFPDTIQCAYIHL
.:.:::.: :.:. ..:. : :. .: . ::: ... .::::..:: ...
NP_653 HDLMLLQLRDQASLGSKVKPISLADHCTQPGQKCTVSGWGTVTSPRENFPDTLNCAEVKI
170 180 190 200 210 220
170 180 190 200 210 220
pF1KE3 VSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCGDHLRGLVSWGNIPCGSKE
...:: :::::::..:.:::. : : :.::::::::::: :.:..:::. ::: ..
NP_653 FPQKKCEDAYPGQITDGMVCAGSSK-GADTCQGDSGGPLVCDGALQGITSWGSDPCGRSD
230 240 250 260 270 280
230 240
pF1KE3 KPGVYTNVCRYTNWIQKTIQAK
:::::::.::: .::.: : .:
NP_653 KPGVYTNICRYLDWIKKIIGSKG
290 300
244 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:53:09 2016 done: Sun Nov 6 22:53:10 2016
Total Scan time: 6.730 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]