Result of FASTA (ccds) for
pFN21AE3621
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3621, 216 aa
1>>>pF1KE3621 216 - 216 aa - 216 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5219+/-0.00102; mu= 12.4817+/- 0.062
mean_var=73.8472+/-14.772, 0's: 0 Z-trim(104.5): 219 B-trim: 254 in 1/49
Lambda= 0.149248
statistics sampled from 7697 (7937) to 7697 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.617), E-opt: 0.2 (0.244), width: 16
Scan time: 1.780
The best scores are: opt bits E(32554)
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 ( 216) 1393 309.2 1.2e-84
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 ( 218) 1260 280.6 5.2e-76
CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15 ( 155) 936 210.8 3.9e-55
CCDS41413.1 RAB25 gene_id:57111|Hs108|chr1 ( 213) 826 187.1 6.9e-48
CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 ( 216) 612 141.1 5.2e-34
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 ( 201) 605 139.5 1.4e-33
CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 ( 212) 604 139.3 1.7e-33
CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 ( 215) 601 138.7 2.7e-33
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 ( 205) 599 138.3 3.4e-33
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 ( 207) 593 137.0 8.5e-33
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19 ( 207) 580 134.2 5.9e-32
CCDS33850.1 RAB43 gene_id:339122|Hs108|chr3 ( 212) 573 132.7 1.7e-31
CCDS33030.1 RAB4B gene_id:53916|Hs108|chr19 ( 213) 567 131.4 4.2e-31
CCDS1720.1 RAB10 gene_id:10890|Hs108|chr2 ( 200) 564 130.7 6.3e-31
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1 ( 203) 557 129.2 1.8e-30
CCDS31050.1 RAB4A gene_id:5867|Hs108|chr1 ( 218) 554 128.6 3e-30
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12 ( 201) 531 123.6 8.7e-29
CCDS34762.2 RAB19 gene_id:401409|Hs108|chr7 ( 217) 530 123.4 1.1e-28
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14 ( 212) 524 122.1 2.6e-28
CCDS14766.1 RAB39B gene_id:116442|Hs108|chrX ( 213) 524 122.1 2.6e-28
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18 ( 244) 519 121.1 6.1e-28
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19 ( 219) 510 119.1 2.1e-27
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16 ( 256) 507 118.5 3.8e-27
CCDS8338.1 RAB39A gene_id:54734|Hs108|chr11 ( 217) 506 118.3 3.9e-27
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11 ( 203) 504 117.8 4.9e-27
CCDS560.1 RAB3B gene_id:5865|Hs108|chr1 ( 219) 503 117.6 6.1e-27
CCDS12372.1 RAB3A gene_id:5864|Hs108|chr19 ( 220) 499 116.7 1.1e-26
CCDS3976.1 RAB3C gene_id:115827|Hs108|chr5 ( 227) 498 116.5 1.3e-26
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17 ( 216) 496 116.1 1.7e-26
CCDS56537.1 RAB2A gene_id:5862|Hs108|chr8 ( 188) 488 114.3 5e-26
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17 ( 216) 488 114.4 5.6e-26
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17 ( 249) 488 114.4 6.3e-26
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3 ( 215) 487 114.2 6.5e-26
CCDS8900.1 RAB5B gene_id:5869|Hs108|chr12 ( 215) 483 113.3 1.2e-25
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10 ( 206) 479 112.4 2.1e-25
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17 ( 223) 479 112.4 2.2e-25
CCDS45826.1 RAB31 gene_id:11031|Hs108|chr18 ( 195) 473 111.1 4.9e-25
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX ( 201) 472 110.9 5.8e-25
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17 ( 196) 469 110.3 8.9e-25
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16 ( 190) 468 110.0 1e-24
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17 ( 228) 469 110.3 1e-24
CCDS33497.1 RAB22A gene_id:57403|Hs108|chr20 ( 194) 451 106.4 1.3e-23
CCDS3747.1 RAB33B gene_id:83452|Hs108|chr4 ( 229) 451 106.4 1.5e-23
CCDS11816.1 RAB40B gene_id:10966|Hs108|chr17 ( 278) 451 106.5 1.7e-23
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX ( 201) 444 104.9 3.8e-23
CCDS10413.1 RAB40C gene_id:57799|Hs108|chr16 ( 281) 444 105.0 5e-23
CCDS14621.1 RAB33A gene_id:9363|Hs108|chrX ( 237) 440 104.1 7.9e-23
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12 ( 225) 439 103.8 8.7e-23
CCDS56275.1 RAB43 gene_id:339122|Hs108|chr3 ( 155) 433 102.4 1.6e-22
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11 ( 208) 432 102.3 2.3e-22
>>CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15 (216 aa)
initn: 1393 init1: 1393 opt: 1393 Z-score: 1632.9 bits: 309.2 E(32554): 1.2e-84
Smith-Waterman score: 1393; 100.0% identity (100.0% similar) in 216 aa overlap (1-216:1-216)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS10 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
130 140 150 160 170 180
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
::::::::::::::::::::::::::::::::::::
CCDS10 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
190 200 210
>>CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19 (218 aa)
initn: 1249 init1: 1214 opt: 1260 Z-score: 1478.1 bits: 280.6 E(32554): 5.2e-76
Smith-Waterman score: 1260; 91.3% identity (96.3% similar) in 218 aa overlap (1-216:1-218)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
::::::::::::::::::::::::::.::::::::::::::: ::..:::::::::::::
CCDS12 LVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQ
130 140 150 160 170 180
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTEN-KP-KVQCCQNI
..:: .: ::.:::: : :::::.. :: :.:::::.
CCDS12 IADRAAHDESPGNNVVDISVPPTTDGQKPNKLQCCQNL
190 200 210
>>CCDS58373.1 RAB11A gene_id:8766|Hs108|chr15 (155 aa)
initn: 936 init1: 936 opt: 936 Z-score: 1103.3 bits: 210.8 E(32554): 3.9e-55
Smith-Waterman score: 936; 100.0% identity (100.0% similar) in 146 aa overlap (1-146:1-146)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
::::::::::::::::::::::::::
CCDS58 LVGNKSDLRHLRAVPTDEARAFAEKNEANVRQTRK
130 140 150
>>CCDS41413.1 RAB25 gene_id:57111|Hs108|chr1 (213 aa)
initn: 800 init1: 800 opt: 826 Z-score: 973.2 bits: 187.1 E(32554): 6.9e-48
Smith-Waterman score: 826; 67.2% identity (88.4% similar) in 189 aa overlap (2-190:4-191)
10 20 30 40 50
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGK
::..: :...:::::::.:::::.:::::::::::. .:..::::::.::....
CCDS41 MGNGTEED-YNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTA
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 TIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIV
..::::::::: ::::::::::::::::::::.:..:: :: :::::::: :::...::
CCDS41 AVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIV
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 IMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ
.::::::::: . : :::.::: :::.::: :.::::::::::: ::.:.: ::. ::.
CCDS41 VMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSK
120 130 140 150 160 170
180 190 200 210
pF1KE3 KQMSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
..... : : ..
CCDS41 QRQNSIRTNAITLGSAQAGQEPGPGEKRACCISL
180 190 200 210
>>CCDS9570.1 RAB2B gene_id:84932|Hs108|chr14 (216 aa)
initn: 628 init1: 605 opt: 612 Z-score: 724.1 bits: 141.1 E(32554): 5.2e-34
Smith-Waterman score: 612; 48.8% identity (76.4% similar) in 203 aa overlap (8-207:3-204)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
: :::: ..:::.::::: :: .:: ..:. ::::::..: ...::: :
CCDS95 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQI
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::: .:.:: .:::::.::::::::... :.... ::.. :.:..::.:::
CCDS95 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
:.::::::. : : .:..:::...:: :.:::: . ::: :: . :::: ..:
CCDS95 LIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGL
120 130 140 150 160 170
190 200 210
pF1KE3 MSDRREND---MSPSNNVVPIHVPPTTENKPKVQCCQNI
.. . : . ..:.... : :.. ..
CCDS95 FDVHNEANGIKIGPQQSI-STSVGPSASQRNSRDIGSNSGCC
180 190 200 210
>>CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11 (201 aa)
initn: 602 init1: 602 opt: 605 Z-score: 716.4 bits: 139.5 E(32554): 1.4e-33
Smith-Waterman score: 605; 51.0% identity (74.7% similar) in 194 aa overlap (5-197:2-195)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
. :::::::..:::::::::: :: ::. . .. :::::.: :.:..:::::
CCDS31 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.:.:::.::::: : ..:::.. . .: ::..::.:. .:. :. .
CCDS31 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
:::::::: ..: . :. ::.. :. :.:::: ..:::: ::.:. .:: . ..
CCDS31 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA
120 130 140 150 160 170
190 200 210
pF1KE3 MSD-RRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
: .: : :. : :
CCDS31 ASGGERPNLKIDSTPVKPAGGGCC
180 190 200
>>CCDS6175.1 RAB2A gene_id:5862|Hs108|chr8 (212 aa)
initn: 621 init1: 598 opt: 604 Z-score: 714.9 bits: 139.3 E(32554): 1.7e-33
Smith-Waterman score: 604; 55.0% identity (80.1% similar) in 171 aa overlap (8-178:3-173)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
: :::: ..:::.::::: :: .:: ..:. ::::::..: : .::: :
CCDS61 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQI
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::: .:.:: .:::::.::::::::... :.... ::.. :.:..::.:::
CCDS61 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
:.::::::. : : .:..:::...:: :.:::: ..::: :: . :::. ...
CCDS61 LIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV
120 130 140 150 160 170
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
CCDS61 FDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC
180 190 200 210
>>CCDS6827.1 RAB14 gene_id:51552|Hs108|chr9 (215 aa)
initn: 586 init1: 568 opt: 601 Z-score: 711.3 bits: 138.7 E(32554): 2.7e-33
Smith-Waterman score: 601; 45.5% identity (71.8% similar) in 213 aa overlap (1-213:1-213)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
:.: .:.:.:: ..::: ::::: :: .::...: . ::::::.:: :.:.:. :
CCDS68 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.::.: .:::::.:::.::::... ::... :: . :. .. : ::.
CCDS68 KLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVII
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
:.:::.::. : : .::. :::.::: :.:.:: . ::: :: .::. ... .
CCDS68 LIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGS
130 140 150 160 170 180
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
.. .. . .: :.: .:. . :
CCDS68 LDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
190 200 210
>>CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2 (205 aa)
initn: 587 init1: 587 opt: 599 Z-score: 709.3 bits: 138.3 E(32554): 3.4e-33
Smith-Waterman score: 599; 46.5% identity (72.3% similar) in 213 aa overlap (1-213:1-205)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
:.. . :::::::..:::::::::: :: ::. . .. :::::.: :.:..:::::
CCDS46 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.:.:::.::::: : ..:::.. . ...::..::.:. .:. :. .
CCDS46 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
::::: :: ..: :. ::.. :. :.:::: ..:::: .:.:. .:: .:.
CCDS46 LVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI-----KKR
130 140 150 160 170
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
:. . ..:: :. :. .. ::
CCDS46 MGPGATAGGAEKSNV-KIQSTPVKQSGGG--CC
180 190 200
>>CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15 (207 aa)
initn: 607 init1: 585 opt: 593 Z-score: 702.3 bits: 137.0 E(32554): 8.5e-33
Smith-Waterman score: 598; 46.0% identity (75.2% similar) in 202 aa overlap (8-209:5-197)
10 20 30 40 50 60
pF1KE3 MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTI
::::::..:::::::::. :: ::... :: ::::..: :.:..::: :
CCDS10 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKI
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIM
: ::::::::::.:.::.::::::.: .:::::... ...:.. :......::.:.. :
CCDS10 KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 LVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQ
..::: :. : : .... .: :..:.:::: .:.::: :: :. .:. .
CCDS10 ILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKL----
120 130 140 150 160 170
190 200 210
pF1KE3 MSDRRENDMSPSNNVVPIHVPPTTENKPKVQCCQNI
.:. :: . .. :... :::. :
CCDS10 --NRKMNDSNSAGAGGPVKI---TENRSKKTSFFRCSLL
180 190 200
216 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:32:41 2016 done: Mon Nov 7 01:32:41 2016
Total Scan time: 1.780 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]