Result of FASTA (ccds) for
pFN21AE3620
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3620, 223 aa
1>>>pF1KE3620 223 - 223 aa - 223 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5368+/-0.000715; mu= 12.7679+/- 0.043
mean_var=70.7834+/-14.041, 0's: 0 Z-trim(109.6): 27 B-trim: 0 in 0/53
Lambda= 0.152443
statistics sampled from 10964 (10987) to 10964 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.338), width: 16
Scan time: 2.250
The best scores are: opt bits E(32554)
CCDS629.1 AK4 gene_id:205|Hs108|chr1 ( 223) 1494 337.2 5.1e-93
CCDS81340.1 AK4 gene_id:205|Hs108|chr1 ( 171) 1155 262.6 1.1e-70
CCDS6455.1 AK3 gene_id:50808|Hs108|chr9 ( 227) 926 212.3 2.1e-55
CCDS56561.1 AK3 gene_id:50808|Hs108|chr9 ( 157) 676 157.2 5.4e-39
CCDS56562.1 AK3 gene_id:50808|Hs108|chr9 ( 187) 612 143.2 1.1e-34
CCDS81296.1 AK2 gene_id:204|Hs108|chr1 ( 232) 522 123.4 1.2e-28
CCDS373.1 AK2 gene_id:204|Hs108|chr1 ( 232) 522 123.4 1.2e-28
CCDS374.1 AK2 gene_id:204|Hs108|chr1 ( 239) 522 123.4 1.2e-28
CCDS81294.1 AK2 gene_id:204|Hs108|chr1 ( 190) 352 86.0 1.8e-17
CCDS6954.1 AK8 gene_id:158067|Hs108|chr9 ( 479) 320 79.2 5.2e-15
CCDS81295.1 AK2 gene_id:204|Hs108|chr1 ( 133) 266 67.0 6.6e-12
CCDS676.1 AK5 gene_id:26289|Hs108|chr1 ( 536) 273 68.8 7.3e-12
CCDS675.1 AK5 gene_id:26289|Hs108|chr1 ( 562) 273 68.9 7.6e-12
CCDS6881.1 AK1 gene_id:203|Hs108|chr9 ( 194) 259 65.5 2.6e-11
CCDS83419.1 AK1 gene_id:203|Hs108|chr9 ( 210) 259 65.6 2.8e-11
>>CCDS629.1 AK4 gene_id:205|Hs108|chr1 (223 aa)
initn: 1494 init1: 1494 opt: 1494 Z-score: 1783.5 bits: 337.2 E(32554): 5.1e-93
Smith-Waterman score: 1494; 100.0% identity (100.0% similar) in 223 aa overlap (1-223:1-223)
10 20 30 40 50 60
pF1KE3 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 SLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLK
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS62 DRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKP
130 140 150 160 170 180
190 200 210 220
pF1KE3 VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY
:::::::::::::::::::::::::::::::::::::::::::
CCDS62 VIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY
190 200 210 220
>>CCDS81340.1 AK4 gene_id:205|Hs108|chr1 (171 aa)
initn: 1155 init1: 1155 opt: 1155 Z-score: 1382.3 bits: 262.6 E(32554): 1.1e-70
Smith-Waterman score: 1155; 100.0% identity (100.0% similar) in 171 aa overlap (53-223:1-171)
30 40 50 60 70 80
pF1KE3 QRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLLVPDHVITRLMMSELENRRG
::::::::::::::::::::::::::::::
CCDS81 MAKQYIEKSLLVPDHVITRLMMSELENRRG
10 20 30
90 100 110 120 130 140
pF1KE3 QHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 QHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNP
40 50 60 70 80 90
150 160 170 180 190 200
pF1KE3 PHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTETNKI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 PHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTETNKI
100 110 120 130 140 150
210 220
pF1KE3 WPYVYTLFSNKITPIQSKEAY
:::::::::::::::::::::
CCDS81 WPYVYTLFSNKITPIQSKEAY
160 170
>>CCDS6455.1 AK3 gene_id:50808|Hs108|chr9 (227 aa)
initn: 929 init1: 912 opt: 926 Z-score: 1108.2 bits: 212.3 E(32554): 2.1e-55
Smith-Waterman score: 926; 59.7% identity (85.1% similar) in 221 aa overlap (2-222:4-223)
10 20 30 40 50
pF1KE3 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYI
...::::::.: :::::::: .::. .: :.::::: .::.:. .::.: .:: .:
CCDS64 MGASARLLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEIGVLAKAFI
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 EKSLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFET
... :.:: :.::: . ::.: :::::::::: ::::::. ..: ::.::.:::.
CCDS64 DQGKLIPDDVMTRLALHELKNLTQYSWLLDGFPRTLPQAEALDRAYQIDTVINLNVPFEV
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 LKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVA
.:.::. ::::: ::::::..::::.. ::::.:::::.:.::::::.: ::. :.: .
CCDS64 IKQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQT
130 140 150 160 170 180
180 190 200 210 220
pF1KE3 KPVIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY
:::.: :...:::. ::::::::::::::.....:. : .:..:
CCDS64 KPVLEYYQKKGVLETFSGTETNKIWPYVYAFLQTKV-PQRSQKASVTP
190 200 210 220
>>CCDS56561.1 AK3 gene_id:50808|Hs108|chr9 (157 aa)
initn: 684 init1: 665 opt: 676 Z-score: 813.5 bits: 157.2 E(32554): 5.4e-39
Smith-Waterman score: 676; 61.7% identity (85.7% similar) in 154 aa overlap (69-222:1-153)
40 50 60 70 80 90
pF1KE3 FLRENIKASTEVGEMAKQYIEKSLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAE
.::: . ::.: :::::::::: :::
CCDS56 MTRLALHELKNLTQYSWLLDGFPRTLPQAE
10 20 30
100 110 120 130 140 150
pF1KE3 ALDKICEVDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQ
:::. ..: ::.::.:::..:.::. ::::: ::::::..::::.. ::::.:::::.:
CCDS56 ALDRAYQIDTVINLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQ
40 50 60 70 80 90
160 170 180 190 200 210
pF1KE3 QEDDKPEAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQ
.::::::.: ::. :.: .:::.: :...:::. ::::::::::::::.....:. : .
CCDS56 REDDKPETVIKRLKAYEDQTKPVLEYYQKKGVLETFSGTETNKIWPYVYAFLQTKV-PQR
100 110 120 130 140
220
pF1KE3 SKEAY
:..:
CCDS56 SQKASVTP
150
>>CCDS56562.1 AK3 gene_id:50808|Hs108|chr9 (187 aa)
initn: 784 init1: 603 opt: 612 Z-score: 736.3 bits: 143.2 E(32554): 1.1e-34
Smith-Waterman score: 705; 52.0% identity (72.4% similar) in 221 aa overlap (2-222:4-183)
10 20 30 40 50
pF1KE3 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYI
...::::::.: :::::::: .::. .: :.::::: .::.:
CCDS56 MGASARLLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDN---------------
10 20 30 40
60 70 80 90 100 110
pF1KE3 EKSLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFET
:. :: :::::: ::::::. ..: ::.::.:::.
CCDS56 --------------ML------RGT-----GFPRTLPQAEALDRAYQIDTVINLNVPFEV
50 60 70 80
120 130 140 150 160 170
pF1KE3 LKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVA
.:.::. ::::: ::::::..::::.. ::::.:::::.:.::::::.: ::. :.: .
CCDS56 IKQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKPETVIKRLKAYEDQT
90 100 110 120 130 140
180 190 200 210 220
pF1KE3 KPVIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKITPIQSKEAY
:::.: :...:::. ::::::::::::::.....:. : .:..:
CCDS56 KPVLEYYQKKGVLETFSGTETNKIWPYVYAFLQTKV-PQRSQKASVTP
150 160 170 180
>>CCDS81296.1 AK2 gene_id:204|Hs108|chr1 (232 aa)
initn: 518 init1: 251 opt: 522 Z-score: 627.9 bits: 123.4 E(32554): 1.2e-28
Smith-Waterman score: 522; 40.0% identity (69.8% similar) in 215 aa overlap (4-211:14-228)
10 20 30 40 50
pF1KE3 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEV
: .:::.:::::.:::: :.:.:: . ::..: .:: . ...:.
CCDS81 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
10 20 30 40 50 60
60 70 80 90 100
pF1KE3 GEMAKQYIEKSLLVPDHVITRLMMSELENRRGQH-WLLDGFPRTLGQAEALDKICE----
:. : .. . :: :.....:. ..::. .. .::::::::. ::: :: . :
CCDS81 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 -VDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKP
.: :: ..:: : :.. : ::: ::: :. .::::. ::.:::::... ::.
CCDS81 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE3 EAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTET-NKIWPYVYTLFSNKITPIQSKEAY
.:. ::. :. . :.:: :..::. .....: . .. . . ::
CCDS81 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATC
190 200 210 220 230
>>CCDS373.1 AK2 gene_id:204|Hs108|chr1 (232 aa)
initn: 518 init1: 251 opt: 522 Z-score: 627.9 bits: 123.4 E(32554): 1.2e-28
Smith-Waterman score: 522; 40.0% identity (69.8% similar) in 215 aa overlap (4-211:14-228)
10 20 30 40 50
pF1KE3 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEV
: .:::.:::::.:::: :.:.:: . ::..: .:: . ...:.
CCDS37 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
10 20 30 40 50 60
60 70 80 90 100
pF1KE3 GEMAKQYIEKSLLVPDHVITRLMMSELENRRGQH-WLLDGFPRTLGQAEALDKICE----
:. : .. . :: :.....:. ..::. .. .::::::::. ::: :: . :
CCDS37 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 -VDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKP
.: :: ..:: : :.. : ::: ::: :. .::::. ::.:::::... ::.
CCDS37 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE3 EAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTET-NKIWPYVYTLFSNKITPIQSKEAY
.:. ::. :. . :.:: :..::. .....: . .. . . ::
CCDS37 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATS
190 200 210 220 230
>>CCDS374.1 AK2 gene_id:204|Hs108|chr1 (239 aa)
initn: 518 init1: 251 opt: 522 Z-score: 627.7 bits: 123.4 E(32554): 1.2e-28
Smith-Waterman score: 522; 40.0% identity (69.8% similar) in 215 aa overlap (4-211:14-228)
10 20 30 40 50
pF1KE3 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEV
: .:::.:::::.:::: :.:.:: . ::..: .:: . ...:.
CCDS37 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
10 20 30 40 50 60
60 70 80 90 100
pF1KE3 GEMAKQYIEKSLLVPDHVITRLMMSELENRRGQH-WLLDGFPRTLGQAEALDKICE----
:. : .. . :: :.....:. ..::. .. .::::::::. ::: :: . :
CCDS37 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 -VDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKP
.: :: ..:: : :.. : ::: ::: :. .::::. ::.:::::... ::.
CCDS37 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE3 EAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTET-NKIWPYVYTLFSNKITPIQSKEAY
.:. ::. :. . :.:: :..::. .....: . .. . . ::
CCDS37 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI
190 200 210 220 230
>>CCDS81294.1 AK2 gene_id:204|Hs108|chr1 (190 aa)
initn: 431 init1: 251 opt: 352 Z-score: 427.1 bits: 86.0 E(32554): 1.8e-17
Smith-Waterman score: 357; 36.0% identity (57.5% similar) in 214 aa overlap (4-211:14-186)
10 20 30 40 50
pF1KE3 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEV
: .:::.:::::.:::: ..:.
CCDS81 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGT------------QVSD--------------
10 20 30
60 70 80 90 100
pF1KE3 GEMAKQYIEKSLLVPDHVITRLMMSELENRRGQHWLLDGFPRTLGQAEALDKICE-----
::. . :::.: .: . : .::::::::. ::: :: . :
CCDS81 -EMVVELIEKNLETP------------LCKNG--FLLDGFPRTVRQAEMLDDLMEKRKEK
40 50 60 70
110 120 130 140 150 160
pF1KE3 VDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKPE
.: :: ..:: : :.. : ::: ::: :. .::::. ::.:::::... ::. .
CCDS81 LDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNEK
80 90 100 110 120 130
170 180 190 200 210 220
pF1KE3 AVAARLRQYKDVAKPVIELYKSRGVLHQFSGTET-NKIWPYVYTLFSNKITPIQSKEAY
:. ::. :. . :.:: :..::. .....: . .. . . ::
CCDS81 ALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATS
140 150 160 170 180 190
>>CCDS6954.1 AK8 gene_id:158067|Hs108|chr9 (479 aa)
initn: 337 init1: 151 opt: 320 Z-score: 383.0 bits: 79.2 E(32554): 5.2e-15
Smith-Waterman score: 320; 28.6% identity (60.4% similar) in 217 aa overlap (7-220:270-477)
10 20 30
pF1KE3 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSS
:...::: ::::. .::.. : ..
CCDS69 ISADQPCVDVFYQALTYVQSNHRTNAPFTPRVLLLGPVGSGKSLQAALLAQKYRLVNVCC
240 250 260 270 280 290
40 50 60 70 80 90
pF1KE3 GHFLRENIKASTEVGEMAKQYIEKSLLVPDHVITRLMMSELENRR--GQHWLLDGFPRTL
:..:.: . : ::. . ..:: . ::: .. ... ..:... . :.: : :: :
CCDS69 GQLLKEAVADRTTFGELIQPFFEKEMAVPDSLLMKVLSQRLDQQDCIQKGWVLHGVPRDL
300 310 320 330 340 350
100 110 120 130 140 150
pF1KE3 GQAEALDKIC-EVDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTG
::. :... . . :. ::.::... .::. : : : .:. :.: ..:: . :.
CCDS69 DQAHLLNRLGYNPNRVFFLNVPFDSIMERLTLRRIDPVTGERYHLMYKPPPTMEIQ----
360 370 380 390 400 410
160 170 180 190 200 210
pF1KE3 EPLVQQEDDKPEAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTETNKIWPYVYTLFSNK
:.:. : : : .. . . . .:: : .:. . . .. :. :.
CCDS69 ARLLQNPKDAEEQVKLKMDLFYRNSADLEQLYGSAITLN--GDQDPYTVFEYIE---SGI
420 430 440 450 460 470
220
pF1KE3 ITPIQSKEAY
:.:. .:
CCDS69 INPLPKKIP
223 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:12:33 2016 done: Mon Nov 7 01:12:34 2016
Total Scan time: 2.250 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]