Result of FASTA (omim) for
pFN21AE3618
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3618, 298 aa
1>>>pF1KE3618 298 - 298 aa - 298 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1469+/-0.00029; mu= 14.1464+/- 0.018
mean_var=150.4984+/-31.622, 0's: 0 Z-trim(122.4): 116 B-trim: 1859 in 1/54
Lambda= 0.104546
statistics sampled from 40425 (40584) to 40425 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.81), E-opt: 0.2 (0.476), width: 16
Scan time: 8.640
The best scores are: opt bits E(85289)
NP_647478 (OMIM: 605737) baculoviral IAP repeat-co ( 298) 2163 337.2 2.4e-92
NP_071444 (OMIM: 605737) baculoviral IAP repeat-co ( 280) 1589 250.6 2.7e-66
NP_892007 (OMIM: 601721) baculoviral IAP repeat-co ( 604) 389 70.0 1.3e-11
XP_016873132 (OMIM: 601721) PREDICTED: baculoviral ( 604) 389 70.0 1.3e-11
NP_001156 (OMIM: 601721) baculoviral IAP repeat-co ( 604) 389 70.0 1.3e-11
NP_001243095 (OMIM: 601712) baculoviral IAP repeat ( 569) 384 69.2 2.2e-11
NP_001157 (OMIM: 601712) baculoviral IAP repeat-co ( 618) 384 69.2 2.3e-11
NP_001243092 (OMIM: 601712) baculoviral IAP repeat ( 618) 384 69.2 2.3e-11
XP_006724817 (OMIM: 300079,300635,308240) PREDICTE ( 497) 330 61.0 5.6e-09
NP_001191330 (OMIM: 300079,300635,308240) E3 ubiqu ( 497) 330 61.0 5.6e-09
NP_001158 (OMIM: 300079,300635,308240) E3 ubiquiti ( 497) 330 61.0 5.6e-09
XP_011529631 (OMIM: 300079,300635,308240) PREDICTE ( 497) 330 61.0 5.6e-09
NP_004527 (OMIM: 600355) baculoviral IAP repeat-co (1403) 303 57.4 1.8e-07
NP_075043 (OMIM: 600355) baculoviral IAP repeat-co (1241) 281 54.0 1.7e-06
XP_016855855 (OMIM: 611141) PREDICTED: E3 ubiquiti ( 911) 217 44.2 0.0011
XP_016855854 (OMIM: 611141) PREDICTED: E3 ubiquiti ( 932) 217 44.2 0.0011
NP_001164159 (OMIM: 611141) E3 ubiquitin-protein l (1005) 217 44.3 0.0012
XP_016855853 (OMIM: 611141) PREDICTED: E3 ubiquiti (1029) 217 44.3 0.0012
XP_016855852 (OMIM: 611141) PREDICTED: E3 ubiquiti (1033) 217 44.3 0.0012
XP_006710435 (OMIM: 611141) PREDICTED: E3 ubiquiti (1034) 217 44.3 0.0012
XP_016855851 (OMIM: 611141) PREDICTED: E3 ubiquiti (1047) 217 44.3 0.0012
NP_001164158 (OMIM: 611141) E3 ubiquitin-protein l (1056) 217 44.3 0.0012
NP_001164157 (OMIM: 611141) E3 ubiquitin-protein l (1066) 217 44.3 0.0012
NP_543151 (OMIM: 611141) E3 ubiquitin-protein liga (1070) 217 44.3 0.0012
XP_016855850 (OMIM: 611141) PREDICTED: E3 ubiquiti (1094) 217 44.3 0.0013
XP_016855849 (OMIM: 611141) PREDICTED: E3 ubiquiti (1134) 217 44.3 0.0013
XP_016855848 (OMIM: 611141) PREDICTED: E3 ubiquiti (1144) 217 44.4 0.0013
XP_016855847 (OMIM: 611141) PREDICTED: E3 ubiquiti (1148) 217 44.4 0.0013
XP_011539044 (OMIM: 611141) PREDICTED: E3 ubiquiti (1183) 217 44.4 0.0013
XP_011539043 (OMIM: 611141) PREDICTED: E3 ubiquiti (1184) 217 44.4 0.0013
XP_011539039 (OMIM: 611141) PREDICTED: E3 ubiquiti (1219) 217 44.4 0.0014
XP_016855846 (OMIM: 611141) PREDICTED: E3 ubiquiti (1232) 217 44.4 0.0014
XP_016855845 (OMIM: 611141) PREDICTED: E3 ubiquiti (1240) 217 44.4 0.0014
XP_011539038 (OMIM: 611141) PREDICTED: E3 ubiquiti (1240) 217 44.4 0.0014
XP_016855844 (OMIM: 611141) PREDICTED: E3 ubiquiti (1241) 217 44.4 0.0014
XP_016855843 (OMIM: 611141) PREDICTED: E3 ubiquiti (1264) 217 44.4 0.0014
XP_011539033 (OMIM: 611141) PREDICTED: E3 ubiquiti (1273) 217 44.4 0.0014
XP_016855842 (OMIM: 611141) PREDICTED: E3 ubiquiti (1276) 217 44.4 0.0014
XP_016855841 (OMIM: 611141) PREDICTED: E3 ubiquiti (1283) 217 44.4 0.0014
XP_016855840 (OMIM: 611141) PREDICTED: E3 ubiquiti (1291) 217 44.4 0.0014
XP_016855839 (OMIM: 611141) PREDICTED: E3 ubiquiti (1293) 217 44.4 0.0014
XP_016855838 (OMIM: 611141) PREDICTED: E3 ubiquiti (1297) 217 44.4 0.0014
XP_005249090 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 264) 195 40.3 0.005
XP_005249089 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 390) 195 40.5 0.0065
NP_037394 (OMIM: 610082) E3 ubiquitin-protein liga ( 445) 195 40.5 0.007
NP_001159 (OMIM: 603352) baculoviral IAP repeat-co ( 142) 187 38.7 0.0078
>>NP_647478 (OMIM: 605737) baculoviral IAP repeat-contai (298 aa)
initn: 2163 init1: 2163 opt: 2163 Z-score: 1778.9 bits: 337.2 E(85289): 2.4e-92
Smith-Waterman score: 2163; 99.7% identity (100.0% similar) in 298 aa overlap (1-298:1-298)
10 20 30 40 50 60
pF1KE3 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVE
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
NP_647 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAEAQRAWWVLEPPGARDVE
190 200 210 220 230 240
250 260 270 280 290
pF1KE3 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
250 260 270 280 290
>>NP_071444 (OMIM: 605737) baculoviral IAP repeat-contai (280 aa)
initn: 1587 init1: 1587 opt: 1589 Z-score: 1311.3 bits: 250.6 E(85289): 2.7e-66
Smith-Waterman score: 1984; 94.0% identity (94.0% similar) in 298 aa overlap (1-298:1-280)
10 20 30 40 50 60
pF1KE3 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVE
::::::::::::::::::::::::::::::::::::: :::::
NP_071 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPG------------------ARDVE
190 200 210 220
250 260 270 280 290
pF1KE3 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
230 240 250 260 270 280
>>NP_892007 (OMIM: 601721) baculoviral IAP repeat-contai (604 aa)
initn: 617 init1: 380 opt: 389 Z-score: 329.3 bits: 70.0 E(85289): 1.3e-11
Smith-Waterman score: 389; 39.4% identity (71.2% similar) in 132 aa overlap (48-174:215-342)
20 30 40 50 60 70
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR-----PLTEEEEEEGAG
:. :. . .:: :. :.. .. .
NP_892 SPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRHFPKCPFIENQLQDTSR
190 200 210 220 230 240
80 90 100 110 120 130
pF1KE3 ATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQ
:.: .: .. :. .:..:: .. : :: ::.:::...:..: :.:: : :::.
NP_892 YTVSNL----SMQTHAARFKTFFNWPSSVLVNPEQLASAGFYYVGNSDDVKCFCCDGGLR
250 260 270 280 290 300
140 150 160 170 180 190
pF1KE3 SWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPWEEPEDAAPVAPS
:. :::::..:::::: :..:.: ::..:...:: .. .::
NP_892 CWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHLLEQLLSTSDSPGDENAESS
310 320 330 340 350 360
200 210 220 230 240 250
pF1KE3 VPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTC
NP_892 IIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQRKILATGENYRLVNDLVLDL
370 380 390 400 410 420
>--
initn: 215 init1: 205 opt: 327 Z-score: 278.7 bits: 60.6 E(85289): 8.7e-09
Smith-Waterman score: 327; 72.1% identity (88.5% similar) in 61 aa overlap (239-298:544-604)
210 220 230 240 250 260
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
:: ::::::::::::::.:. :::::.:::
NP_892 LQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCG
520 530 540 550 560 570
270 280 290
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
::: : .:::.:. :::::. ... ::::::
NP_892 HLVVCKDCAPSLRKCPICRSTIKGTVRTFLS
580 590 600
>--
initn: 284 init1: 200 opt: 230 Z-score: 199.7 bits: 46.0 E(85289): 0.00022
Smith-Waterman score: 230; 30.4% identity (60.0% similar) in 135 aa overlap (84-215:26-153)
60 70 80 90 100 110
pF1KE3 QILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGF
.. : :.... .: . : . :: :::
NP_892 MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAGVPVSERSLARAGF
10 20 30 40 50
120 130 140 150 160 170
pF1KE3 FHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQL
..:: .:::.:: : :..:::::.: .: : .:::.:. .. . :.... : .
NP_892 YYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFV---QSLNSVNNLEATSQPT
60 70 80 90 100 110
180 190 200 210 220 230
pF1KE3 LGSWDPWEEPEDAAPVAPSVPASGY---PELPTPRREVQSESAQEPGGVSPAQAQRAWWV
. : ... . :.. ::: .: :.:.. :.
NP_892 F----PSSVTNSTHSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSSYHCAMNN
120 130 140 150 160
240 250 260 270 280 290
pF1KE3 LEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVR
NP_892 ENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRH
170 180 190 200 210 220
>>XP_016873132 (OMIM: 601721) PREDICTED: baculoviral IAP (604 aa)
initn: 617 init1: 380 opt: 389 Z-score: 329.3 bits: 70.0 E(85289): 1.3e-11
Smith-Waterman score: 389; 39.4% identity (71.2% similar) in 132 aa overlap (48-174:215-342)
20 30 40 50 60 70
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR-----PLTEEEEEEGAG
:. :. . .:: :. :.. .. .
XP_016 SPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRHFPKCPFIENQLQDTSR
190 200 210 220 230 240
80 90 100 110 120 130
pF1KE3 ATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQ
:.: .: .. :. .:..:: .. : :: ::.:::...:..: :.:: : :::.
XP_016 YTVSNL----SMQTHAARFKTFFNWPSSVLVNPEQLASAGFYYVGNSDDVKCFCCDGGLR
250 260 270 280 290 300
140 150 160 170 180 190
pF1KE3 SWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPWEEPEDAAPVAPS
:. :::::..:::::: :..:.: ::..:...:: .. .::
XP_016 CWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHLLEQLLSTSDSPGDENAESS
310 320 330 340 350 360
200 210 220 230 240 250
pF1KE3 VPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTC
XP_016 IIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQRKILATGENYRLVNDLVLDL
370 380 390 400 410 420
>--
initn: 215 init1: 205 opt: 327 Z-score: 278.7 bits: 60.6 E(85289): 8.7e-09
Smith-Waterman score: 327; 72.1% identity (88.5% similar) in 61 aa overlap (239-298:544-604)
210 220 230 240 250 260
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
:: ::::::::::::::.:. :::::.:::
XP_016 LQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCG
520 530 540 550 560 570
270 280 290
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
::: : .:::.:. :::::. ... ::::::
XP_016 HLVVCKDCAPSLRKCPICRSTIKGTVRTFLS
580 590 600
>--
initn: 284 init1: 200 opt: 230 Z-score: 199.7 bits: 46.0 E(85289): 0.00022
Smith-Waterman score: 230; 30.4% identity (60.0% similar) in 135 aa overlap (84-215:26-153)
60 70 80 90 100 110
pF1KE3 QILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGF
.. : :.... .: . : . :: :::
XP_016 MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAGVPVSERSLARAGF
10 20 30 40 50
120 130 140 150 160 170
pF1KE3 FHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQL
..:: .:::.:: : :..:::::.: .: : .:::.:. .. . :.... : .
XP_016 YYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFV---QSLNSVNNLEATSQPT
60 70 80 90 100 110
180 190 200 210 220 230
pF1KE3 LGSWDPWEEPEDAAPVAPSVPASGY---PELPTPRREVQSESAQEPGGVSPAQAQRAWWV
. : ... . :.. ::: .: :.:.. :.
XP_016 F----PSSVTNSTHSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSSYHCAMNN
120 130 140 150 160
240 250 260 270 280 290
pF1KE3 LEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVR
XP_016 ENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRH
170 180 190 200 210 220
>>NP_001156 (OMIM: 601721) baculoviral IAP repeat-contai (604 aa)
initn: 617 init1: 380 opt: 389 Z-score: 329.3 bits: 70.0 E(85289): 1.3e-11
Smith-Waterman score: 389; 39.4% identity (71.2% similar) in 132 aa overlap (48-174:215-342)
20 30 40 50 60 70
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR-----PLTEEEEEEGAG
:. :. . .:: :. :.. .. .
NP_001 SPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRHFPKCPFIENQLQDTSR
190 200 210 220 230 240
80 90 100 110 120 130
pF1KE3 ATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQ
:.: .: .. :. .:..:: .. : :: ::.:::...:..: :.:: : :::.
NP_001 YTVSNL----SMQTHAARFKTFFNWPSSVLVNPEQLASAGFYYVGNSDDVKCFCCDGGLR
250 260 270 280 290 300
140 150 160 170 180 190
pF1KE3 SWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPWEEPEDAAPVAPS
:. :::::..:::::: :..:.: ::..:...:: .. .::
NP_001 CWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHLLEQLLSTSDSPGDENAESS
310 320 330 340 350 360
200 210 220 230 240 250
pF1KE3 VPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTC
NP_001 IIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQRKILATGENYRLVNDLVLDL
370 380 390 400 410 420
>--
initn: 215 init1: 205 opt: 327 Z-score: 278.7 bits: 60.6 E(85289): 8.7e-09
Smith-Waterman score: 327; 72.1% identity (88.5% similar) in 61 aa overlap (239-298:544-604)
210 220 230 240 250 260
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
:: ::::::::::::::.:. :::::.:::
NP_001 LQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCG
520 530 540 550 560 570
270 280 290
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
::: : .:::.:. :::::. ... ::::::
NP_001 HLVVCKDCAPSLRKCPICRSTIKGTVRTFLS
580 590 600
>--
initn: 284 init1: 200 opt: 230 Z-score: 199.7 bits: 46.0 E(85289): 0.00022
Smith-Waterman score: 230; 30.4% identity (60.0% similar) in 135 aa overlap (84-215:26-153)
60 70 80 90 100 110
pF1KE3 QILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGF
.. : :.... .: . : . :: :::
NP_001 MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAGVPVSERSLARAGF
10 20 30 40 50
120 130 140 150 160 170
pF1KE3 FHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQL
..:: .:::.:: : :..:::::.: .: : .:::.:. .. . :.... : .
NP_001 YYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFV---QSLNSVNNLEATSQPT
60 70 80 90 100 110
180 190 200 210 220 230
pF1KE3 LGSWDPWEEPEDAAPVAPSVPASGY---PELPTPRREVQSESAQEPGGVSPAQAQRAWWV
. : ... . :.. ::: .: :.:.. :.
NP_001 F----PSSVTNSTHSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSSYHCAMNN
120 130 140 150 160
240 250 260 270 280 290
pF1KE3 LEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVR
NP_001 ENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRH
170 180 190 200 210 220
>>NP_001243095 (OMIM: 601712) baculoviral IAP repeat-con (569 aa)
initn: 562 init1: 376 opt: 384 Z-score: 325.5 bits: 69.2 E(85289): 2.2e-11
Smith-Waterman score: 384; 36.9% identity (61.8% similar) in 157 aa overlap (48-200:181-337)
20 30 40 50 60 70
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLRPLTEEEEEEGAGATLSR
:. : . . : . . :.. ::
NP_001 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
160 170 180 190 200 210
80 90 100 110 120 130
pF1KE3 GPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRG
. . .: .. :. .:. :: .. : :: ::.:::...:..: :.:: : :::. :. :
NP_001 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
220 230 240 250 260 270
140 150 160 170 180 190
pF1KE3 DDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHS----QLLGSWDPWEEPEDAAPVAPSV
::::.::::::: :.::.: ::..:: .: . :::.. : : . :.
NP_001 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
280 290 300 310 320 330
200 210 220 230 240 250
pF1KE3 PASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCK
:. . :
NP_001 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
340 350 360 370 380 390
>--
initn: 206 init1: 200 opt: 323 Z-score: 275.8 bits: 60.0 E(85289): 1.3e-08
Smith-Waterman score: 323; 70.5% identity (88.5% similar) in 61 aa overlap (239-298:509-569)
210 220 230 240 250 260
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
.: ::::::::::::::.:. ::.::.:::
NP_001 LKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCG
480 490 500 510 520 530
270 280 290
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
::: : ::::.:. :::::. ... ::::::
NP_001 HLVVCQECAPSLRKCPICRGIIKGTVRTFLS
540 550 560
>>NP_001157 (OMIM: 601712) baculoviral IAP repeat-contai (618 aa)
initn: 562 init1: 376 opt: 384 Z-score: 325.1 bits: 69.2 E(85289): 2.3e-11
Smith-Waterman score: 384; 36.9% identity (61.8% similar) in 157 aa overlap (48-200:230-386)
20 30 40 50 60 70
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLRPLTEEEEEEGAGATLSR
:. : . . : . . :.. ::
NP_001 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
200 210 220 230 240 250
80 90 100 110 120 130
pF1KE3 GPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRG
. . .: .. :. .:. :: .. : :: ::.:::...:..: :.:: : :::. :. :
NP_001 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
260 270 280 290 300 310
140 150 160 170 180 190
pF1KE3 DDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHS----QLLGSWDPWEEPEDAAPVAPSV
::::.::::::: :.::.: ::..:: .: . :::.. : : . :.
NP_001 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
320 330 340 350 360 370
200 210 220 230 240 250
pF1KE3 PASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCK
:. . :
NP_001 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
380 390 400 410 420 430
>--
initn: 206 init1: 200 opt: 323 Z-score: 275.3 bits: 60.0 E(85289): 1.3e-08
Smith-Waterman score: 323; 70.5% identity (88.5% similar) in 61 aa overlap (239-298:558-618)
210 220 230 240 250 260
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
.: ::::::::::::::.:. ::.::.:::
NP_001 LKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCG
530 540 550 560 570 580
270 280 290
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
::: : ::::.:. :::::. ... ::::::
NP_001 HLVVCQECAPSLRKCPICRGIIKGTVRTFLS
590 600 610
>>NP_001243092 (OMIM: 601712) baculoviral IAP repeat-con (618 aa)
initn: 562 init1: 376 opt: 384 Z-score: 325.1 bits: 69.2 E(85289): 2.3e-11
Smith-Waterman score: 384; 36.9% identity (61.8% similar) in 157 aa overlap (48-200:230-386)
20 30 40 50 60 70
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLRPLTEEEEEEGAGATLSR
:. : . . : . . :.. ::
NP_001 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
200 210 220 230 240 250
80 90 100 110 120 130
pF1KE3 GPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRG
. . .: .. :. .:. :: .. : :: ::.:::...:..: :.:: : :::. :. :
NP_001 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
260 270 280 290 300 310
140 150 160 170 180 190
pF1KE3 DDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHS----QLLGSWDPWEEPEDAAPVAPSV
::::.::::::: :.::.: ::..:: .: . :::.. : : . :.
NP_001 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
320 330 340 350 360 370
200 210 220 230 240 250
pF1KE3 PASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCK
:. . :
NP_001 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
380 390 400 410 420 430
>--
initn: 206 init1: 200 opt: 323 Z-score: 275.3 bits: 60.0 E(85289): 1.3e-08
Smith-Waterman score: 323; 70.5% identity (88.5% similar) in 61 aa overlap (239-298:558-618)
210 220 230 240 250 260
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
.: ::::::::::::::.:. ::.::.:::
NP_001 LKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCG
530 540 550 560 570 580
270 280 290
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
::: : ::::.:. :::::. ... ::::::
NP_001 HLVVCQECAPSLRKCPICRGIIKGTVRTFLS
590 600 610
>>XP_006724817 (OMIM: 300079,300635,308240) PREDICTED: E (497 aa)
initn: 529 init1: 296 opt: 330 Z-score: 282.1 bits: 61.0 E(85289): 5.6e-09
Smith-Waterman score: 508; 35.1% identity (62.0% similar) in 245 aa overlap (79-298:257-497)
50 60 70 80 90 100
pF1KE3 DHVDGQILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELL
: :.:.. : :. .: : . : : :
XP_006 CFFVLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQL
230 240 250 260 270 280
110 120 130 140 150 160
pF1KE3 AAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQE
: :::. :. :::.:: : ::: .:: ..::: .::::.:.:..::..::........
XP_006 ARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHL
290 300 310 320 330 340
170 180 190 200 210
pF1KE3 THSQ---LLGSWD--P--WEEPEDAAPVAPSVPAS---GYPELPTPRREVQSESAQEPGG
::: :. . . : .. .:. : : . :. .... :. : :.
XP_006 THSLEECLVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDI--KKIMEEKIQISGS
350 360 370 380 390 400
220 230 240 250 260
pF1KE3 ---------VSPAQAQRAWWVLEPPGA---RDV--EAQLRRLQEERTCKVCLDRAVSIVF
.. ..::. : . ... : ::::::::. ::.:.:: ..:::
XP_006 NYKSLEVLVADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVF
410 420 430 440 450 460
270 280 290
pF1KE3 VPCGHLV-CAECAPGLQLCPICRAPVRSRVRTFLS
::::::: : .:: ... ::.: . . . . :.:
XP_006 VPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS
470 480 490
>--
initn: 422 init1: 274 opt: 276 Z-score: 238.1 bits: 52.8 E(85289): 1.6e-06
Smith-Waterman score: 276; 46.4% identity (70.2% similar) in 84 aa overlap (79-162:155-235)
50 60 70 80 90 100
pF1KE3 DHVDGQILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELL
: :.: ::: :: :: .:: :.. :. :
XP_006 DHFALDRPSETHADYLLRTGQVVDISDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPREL
130 140 150 160 170 180
110 120 130 140 150 160
pF1KE3 AAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQE
:.::...:: :.:.:: : : :..:. : :.:: . ::.: :.: ::..
XP_006 ASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVL---GRNLNIRSES
190 200 210 220 230 240
170 180 190 200 210 220
pF1KE3 THSQLLGSWDPWEEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAW
XP_006 DAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCF
250 260 270 280 290 300
>>NP_001191330 (OMIM: 300079,300635,308240) E3 ubiquitin (497 aa)
initn: 529 init1: 296 opt: 330 Z-score: 282.1 bits: 61.0 E(85289): 5.6e-09
Smith-Waterman score: 508; 35.1% identity (62.0% similar) in 245 aa overlap (79-298:257-497)
50 60 70 80 90 100
pF1KE3 DHVDGQILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELL
: :.:.. : :. .: : . : : :
NP_001 CFFVLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQL
230 240 250 260 270 280
110 120 130 140 150 160
pF1KE3 AAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQE
: :::. :. :::.:: : ::: .:: ..::: .::::.:.:..::..::........
NP_001 ARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHL
290 300 310 320 330 340
170 180 190 200 210
pF1KE3 THSQ---LLGSWD--P--WEEPEDAAPVAPSVPAS---GYPELPTPRREVQSESAQEPGG
::: :. . . : .. .:. : : . :. .... :. : :.
NP_001 THSLEECLVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDI--KKIMEEKIQISGS
350 360 370 380 390 400
220 230 240 250 260
pF1KE3 ---------VSPAQAQRAWWVLEPPGA---RDV--EAQLRRLQEERTCKVCLDRAVSIVF
.. ..::. : . ... : ::::::::. ::.:.:: ..:::
NP_001 NYKSLEVLVADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVF
410 420 430 440 450 460
270 280 290
pF1KE3 VPCGHLV-CAECAPGLQLCPICRAPVRSRVRTFLS
::::::: : .:: ... ::.: . . . . :.:
NP_001 VPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS
470 480 490
>--
initn: 422 init1: 274 opt: 276 Z-score: 238.1 bits: 52.8 E(85289): 1.6e-06
Smith-Waterman score: 276; 46.4% identity (70.2% similar) in 84 aa overlap (79-162:155-235)
50 60 70 80 90 100
pF1KE3 DHVDGQILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELL
: :.: ::: :: :: .:: :.. :. :
NP_001 DHFALDRPSETHADYLLRTGQVVDISDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPREL
130 140 150 160 170 180
110 120 130 140 150 160
pF1KE3 AAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQE
:.::...:: :.:.:: : : :..:. : :.:: . ::.: :.: ::..
NP_001 ASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVL---GRNLNIRSES
190 200 210 220 230 240
170 180 190 200 210 220
pF1KE3 THSQLLGSWDPWEEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAW
NP_001 DAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCF
250 260 270 280 290 300
298 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 22:57:08 2016 done: Sun Nov 6 22:57:09 2016
Total Scan time: 8.640 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]