Result of FASTA (omim) for
pFN21AE3590
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3590, 203 aa
1>>>pF1KE3590 203 - 203 aa - 203 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.4094+/-0.00045; mu= 13.0235+/- 0.028
mean_var=91.8297+/-17.643, 0's: 0 Z-trim(112.7): 392 B-trim: 549 in 1/53
Lambda= 0.133839
statistics sampled from 21186 (21671) to 21186 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.62), E-opt: 0.2 (0.254), width: 16
Scan time: 5.960
The best scores are: opt bits E(85289)
NP_570137 (OMIM: 612415) ras-related protein Rab-2 ( 203) 1352 271.1 8.5e-73
NP_001026847 (OMIM: 612415) ras-related protein Ra ( 203) 1352 271.1 8.5e-73
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 476 102.0 7.3e-22
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 476 102.0 7.3e-22
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 476 102.0 7.3e-22
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 476 102.0 7.3e-22
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 476 102.1 8.1e-22
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 475 101.8 8.3e-22
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 453 97.6 1.6e-20
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 453 97.6 1.6e-20
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 453 97.6 1.6e-20
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 453 97.6 1.6e-20
NP_055814 (OMIM: 612398) ras-related protein Rab-2 ( 225) 435 94.1 1.8e-19
NP_071894 (OMIM: 602206) ras-related protein Rab-1 ( 212) 420 91.2 1.3e-18
NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194) 419 91.0 1.4e-18
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 401 87.5 1.6e-17
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 401 87.5 1.6e-17
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 397 86.7 2.8e-17
NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195) 382 83.8 2e-16
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 375 82.5 5e-16
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 361 79.8 3.4e-15
XP_016881018 (OMIM: 605694) PREDICTED: ras-related ( 244) 358 79.3 5.8e-15
XP_016881017 (OMIM: 605694) PREDICTED: ras-related ( 248) 358 79.3 5.8e-15
NP_001278977 (OMIM: 179512) ras-related protein Ra ( 201) 354 78.4 8.6e-15
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 350 77.7 1.5e-14
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 348 77.3 2e-14
XP_006712752 (OMIM: 602206) PREDICTED: ras-related ( 190) 347 77.1 2.1e-14
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 346 76.9 2.5e-14
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 344 76.5 3.3e-14
NP_115520 (OMIM: 612909) ras-related protein Rab-6 ( 254) 345 76.8 3.4e-14
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 344 76.5 3.4e-14
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 344 76.5 3.5e-14
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 341 75.9 4.9e-14
XP_016884594 (OMIM: 605662) PREDICTED: ras-related ( 306) 341 76.1 6.6e-14
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 339 75.6 6.8e-14
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 339 75.6 6.8e-14
NP_004905 (OMIM: 605662) ras-related protein Rab-3 ( 333) 341 76.1 7e-14
XP_011528847 (OMIM: 605662) PREDICTED: ras-related ( 341) 341 76.1 7.2e-14
XP_005261916 (OMIM: 605662) PREDICTED: ras-related ( 357) 341 76.1 7.4e-14
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 336 75.0 9.6e-14
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 336 75.0 9.6e-14
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 336 75.0 9.6e-14
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 336 75.0 9.6e-14
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 336 75.0 1e-13
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 335 74.8 1.2e-13
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 333 74.4 1.4e-13
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 333 74.4 1.5e-13
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 333 74.4 1.6e-13
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 332 74.3 1.9e-13
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 330 73.8 2.2e-13
>>NP_570137 (OMIM: 612415) ras-related protein Rab-24 [H (203 aa)
initn: 1352 init1: 1352 opt: 1352 Z-score: 1428.0 bits: 271.1 E(85289): 8.5e-73
Smith-Waterman score: 1352; 100.0% identity (100.0% similar) in 203 aa overlap (1-203:1-203)
10 20 30 40 50 60
pF1KE3 MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDRTVTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_570 MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDRTVTLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 IWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRSLEEGCQIYLCGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_570 IWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRSLEEGCQIYLCGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVAEDYVSVAAFQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_570 KSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVAEDYVSVAAFQV
130 140 150 160 170 180
190 200
pF1KE3 MTEDKGVDLGQKPNPYFYSCCHH
:::::::::::::::::::::::
NP_570 MTEDKGVDLGQKPNPYFYSCCHH
190 200
>>NP_001026847 (OMIM: 612415) ras-related protein Rab-24 (203 aa)
initn: 1352 init1: 1352 opt: 1352 Z-score: 1428.0 bits: 271.1 E(85289): 8.5e-73
Smith-Waterman score: 1352; 100.0% identity (100.0% similar) in 203 aa overlap (1-203:1-203)
10 20 30 40 50 60
pF1KE3 MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDRTVTLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDRTVTLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 IWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRSLEEGCQIYLCGT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKELRSLEEGCQIYLCGT
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVAEDYVSVAAFQV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELFQKVAEDYVSVAAFQV
130 140 150 160 170 180
190 200
pF1KE3 MTEDKGVDLGQKPNPYFYSCCHH
:::::::::::::::::::::::
NP_001 MTEDKGVDLGQKPNPYFYSCCHH
190 200
>>NP_958842 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 390 init1: 272 opt: 476 Z-score: 513.5 bits: 102.0 E(85289): 7.3e-22
Smith-Waterman score: 476; 43.0% identity (72.0% similar) in 207 aa overlap (2-201:15-214)
10 20 30 40
pF1KE3 MSGQRV-DVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQ-NTIGAAF
.:... . :.:.::. :::.::: :.:. .: :: .::::::
NP_958 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQF--HEYQESTIGAAF
10 20 30 40 50
50 60 70 80 90 100
pF1KE3 VAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKE
..... . : :: . ::::::.:::.... .:::::.:::: ::.:....: ::: ::::
NP_958 LTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKE
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE3 L-RSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDEL
: :. . : : :.:.:: .: :.:...: :::. . ..:::.::...:.:.
NP_958 LQRQASPNIVIALAGNKADLAS----KRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEI
120 130 140 150 160 170
170 180 190 200
pF1KE3 FQKVAEDYVSVA---AFQVMTEDKGVDLGQKPNPYFYS-CCHH
:. .:. . : . ...:::: :. :: : ::
NP_958 FMAIAKKLPKNEPQNATGAPGRNRGVDL-QENNPASRSQCCSN
180 190 200 210
>>XP_011523392 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 390 init1: 272 opt: 476 Z-score: 513.5 bits: 102.0 E(85289): 7.3e-22
Smith-Waterman score: 476; 43.0% identity (72.0% similar) in 207 aa overlap (2-201:15-214)
10 20 30 40
pF1KE3 MSGQRV-DVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQ-NTIGAAF
.:... . :.:.::. :::.::: :.:. .: :: .::::::
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQF--HEYQESTIGAAF
10 20 30 40 50
50 60 70 80 90 100
pF1KE3 VAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKE
..... . : :: . ::::::.:::.... .:::::.:::: ::.:....: ::: ::::
XP_011 LTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKE
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE3 L-RSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDEL
: :. . : : :.:.:: .: :.:...: :::. . ..:::.::...:.:.
XP_011 LQRQASPNIVIALAGNKADLAS----KRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEI
120 130 140 150 160 170
170 180 190 200
pF1KE3 FQKVAEDYVSVA---AFQVMTEDKGVDLGQKPNPYFYS-CCHH
:. .:. . : . ...:::: :. :: : ::
XP_011 FMAIAKKLPKNEPQNATGAPGRNRGVDL-QENNPASRSQCCSN
180 190 200 210
>>NP_004574 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 390 init1: 272 opt: 476 Z-score: 513.5 bits: 102.0 E(85289): 7.3e-22
Smith-Waterman score: 476; 43.0% identity (72.0% similar) in 207 aa overlap (2-201:15-214)
10 20 30 40
pF1KE3 MSGQRV-DVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQ-NTIGAAF
.:... . :.:.::. :::.::: :.:. .: :: .::::::
NP_004 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQF--HEYQESTIGAAF
10 20 30 40 50
50 60 70 80 90 100
pF1KE3 VAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKE
..... . : :: . ::::::.:::.... .:::::.:::: ::.:....: ::: ::::
NP_004 LTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKE
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE3 L-RSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDEL
: :. . : : :.:.:: .: :.:...: :::. . ..:::.::...:.:.
NP_004 LQRQASPNIVIALAGNKADLAS----KRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEI
120 130 140 150 160 170
170 180 190 200
pF1KE3 FQKVAEDYVSVA---AFQVMTEDKGVDLGQKPNPYFYS-CCHH
:. .:. . : . ...:::: :. :: : ::
NP_004 FMAIAKKLPKNEPQNATGAPGRNRGVDL-QENNPASRSQCCSN
180 190 200 210
>>XP_011523393 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 390 init1: 272 opt: 476 Z-score: 513.5 bits: 102.0 E(85289): 7.3e-22
Smith-Waterman score: 476; 43.0% identity (72.0% similar) in 207 aa overlap (2-201:15-214)
10 20 30 40
pF1KE3 MSGQRV-DVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQ-NTIGAAF
.:... . :.:.::. :::.::: :.:. .: :: .::::::
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQF--HEYQESTIGAAF
10 20 30 40 50
50 60 70 80 90 100
pF1KE3 VAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKE
..... . : :: . ::::::.:::.... .:::::.:::: ::.:....: ::: ::::
XP_011 LTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKE
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE3 L-RSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDEL
: :. . : : :.:.:: .: :.:...: :::. . ..:::.::...:.:.
XP_011 LQRQASPNIVIALAGNKADLAS----KRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEI
120 130 140 150 160 170
170 180 190 200
pF1KE3 FQKVAEDYVSVA---AFQVMTEDKGVDLGQKPNPYFYS-CCHH
:. .:. . : . ...:::: :. :: : ::
XP_011 FMAIAKKLPKNEPQNATGAPGRNRGVDL-QENNPASRSQCCSN
180 190 200 210
>>NP_001238968 (OMIM: 604037) ras-related protein Rab-5C (249 aa)
initn: 390 init1: 272 opt: 476 Z-score: 512.7 bits: 102.1 E(85289): 8.1e-22
Smith-Waterman score: 476; 43.0% identity (72.0% similar) in 207 aa overlap (2-201:48-247)
10 20 30
pF1KE3 MSGQRV-DVKVVMLGKEYVGKTSLVERYVHD
.:... . :.:.::. :::.::: :.:.
NP_001 TSPHPHALWTTTAGRAMAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKG
20 30 40 50 60 70
40 50 60 70 80
pF1KE3 RFLVGPYQ-NTIGAAFVAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYD
.: :: .::::::..... . : :: . ::::::.:::.... .:::::.:::: ::
NP_001 QF--HEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYD
80 90 100 110 120 130
90 100 110 120 130 140
pF1KE3 LTDSSSFERAKFWVKEL-RSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKA
.:....: ::: ::::: :. . : : :.:.:: .: :.:...: :::. .
NP_001 ITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLAS----KRAVEFQEAQAYADDNSL
140 150 160 170 180 190
150 160 170 180 190 200
pF1KE3 QLFETSSKTGQSVDELFQKVAEDYVSVA---AFQVMTEDKGVDLGQKPNPYFYS-CCHH
..:::.::...:.:.:. .:. . : . ...:::: :. :: : ::
NP_001 LFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPGRNRGVDL-QENNPASRSQCCSN
200 210 220 230 240
>>NP_004153 (OMIM: 179512) ras-related protein Rab-5A is (215 aa)
initn: 420 init1: 271 opt: 475 Z-score: 512.5 bits: 101.8 E(85289): 8.3e-22
Smith-Waterman score: 475; 41.7% identity (71.8% similar) in 206 aa overlap (2-201:14-213)
10 20 30 40
pF1KE3 MSGQRV-DVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQ-NTIGAAFV
.:... . :.:.::. :::.::: :.:. .: .: .::::::.
NP_004 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQF--HEFQESTIGAAFL
10 20 30 40 50
50 60 70 80 90 100
pF1KE3 AKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKEL
.... . : :: . ::::::.:::.... .:::::.:::: ::.:. :: ::: :::::
NP_004 TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKEL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE3 -RSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELF
:. . : : :.:.:: . .: :::...:.:::. . ..:::.::...:.:.:
NP_004 QRQASPNIVIALSGNKADLAN----KRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIF
120 130 140 150 160 170
170 180 190 200
pF1KE3 QKVAEDYVSVAAFQVMTED---KGVDLGQKPNPYFYSCCHH
. .:. . . ... .:::: . .: .::
NP_004 MAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
180 190 200 210
>>NP_001238965 (OMIM: 179514) ras-related protein Rab-5B (215 aa)
initn: 384 init1: 269 opt: 453 Z-score: 489.5 bits: 97.6 E(85289): 1.6e-20
Smith-Waterman score: 453; 41.4% identity (70.7% similar) in 198 aa overlap (9-201:22-213)
10 20 30 40
pF1KE3 MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQ-NTIGAAFV
:.:.::. :::.::: :.:. .: :: .::::::.
NP_001 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQF--HEYQESTIGAAFL
10 20 30 40 50
50 60 70 80 90 100
pF1KE3 AKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKEL
.. . . : :: . ::::::.:::.... .:::::.:::: ::.:.. .: ::: :::::
NP_001 TQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKEL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE3 -RSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELF
:. . : : :.:.:: . .: :.....: :::. . ..:::.::...:..::
NP_001 QRQASPSIVIALAGNKADLAN----KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLF
120 130 140 150 160 170
170 180 190 200
pF1KE3 QKVAEDYVSVAAFQV---MTEDKGVDLGQKPNPYFYSCCHH
.:. . .. ...:::: .. . .::
NP_001 LAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
180 190 200 210
>>XP_005269108 (OMIM: 179514) PREDICTED: ras-related pro (215 aa)
initn: 384 init1: 269 opt: 453 Z-score: 489.5 bits: 97.6 E(85289): 1.6e-20
Smith-Waterman score: 453; 41.4% identity (70.7% similar) in 198 aa overlap (9-201:22-213)
10 20 30 40
pF1KE3 MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQ-NTIGAAFV
:.:.::. :::.::: :.:. .: :: .::::::.
XP_005 MTSRSTARPNGQPQASKICQFKLVLLGESAVGKSSLVLRFVKGQF--HEYQESTIGAAFL
10 20 30 40 50
50 60 70 80 90 100
pF1KE3 AKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFERAKFWVKEL
.. . . : :: . ::::::.:::.... .:::::.:::: ::.:.. .: ::: :::::
XP_005 TQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKEL
60 70 80 90 100 110
110 120 130 140 150 160
pF1KE3 -RSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDVQDYADNIKAQLFETSSKTGQSVDELF
:. . : : :.:.:: . .: :.....: :::. . ..:::.::...:..::
XP_005 QRQASPSIVIALAGNKADLAN----KRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLF
120 130 140 150 160 170
170 180 190 200
pF1KE3 QKVAEDYVSVAAFQV---MTEDKGVDLGQKPNPYFYSCCHH
.:. . .. ...:::: .. . .::
XP_005 LAIAKKLPKSEPQNLGGAAGRSRGVDLHEQSQQNKSQCCSN
180 190 200 210
203 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 01:20:13 2016 done: Mon Nov 7 01:20:14 2016
Total Scan time: 5.960 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]