Result of FASTA (ccds) for
pFN21AE3541
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3541, 295 aa
1>>>pF1KE3541 295 - 295 aa - 295 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.1737+/-0.000671; mu= 16.2765+/- 0.040
mean_var=68.1602+/-13.212, 0's: 0 Z-trim(110.3): 28 B-trim: 9 in 1/51
Lambda= 0.155349
statistics sampled from 11461 (11487) to 11461 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.353), width: 16
Scan time: 2.510
The best scores are: opt bits E(32554)
CCDS425.1 EPHA10 gene_id:284656|Hs108|chr1 ( 295) 2045 466.8 8.4e-132
CCDS41305.1 EPHA10 gene_id:284656|Hs108|chr1 (1008) 1966 449.5 4.8e-126
CCDS75494.1 EPHA7 gene_id:2045|Hs108|chr6 ( 279) 1215 280.8 8e-76
CCDS5031.1 EPHA7 gene_id:2045|Hs108|chr6 ( 998) 1216 281.4 1.9e-75
CCDS46875.1 EPHA3 gene_id:2042|Hs108|chr3 ( 539) 1095 254.1 1.7e-67
CCDS2922.1 EPHA3 gene_id:2042|Hs108|chr3 ( 983) 1095 254.3 2.7e-67
CCDS2447.1 EPHA4 gene_id:2043|Hs108|chr2 ( 986) 1087 252.5 9.5e-67
CCDS75132.1 EPHA5 gene_id:2044|Hs108|chr4 (1004) 1072 249.1 9.9e-66
CCDS3514.1 EPHA5 gene_id:2044|Hs108|chr4 (1015) 1072 249.1 1e-65
CCDS75131.1 EPHA5 gene_id:2044|Hs108|chr4 (1016) 1072 249.1 1e-65
CCDS3513.1 EPHA5 gene_id:2044|Hs108|chr4 (1037) 1072 249.1 1e-65
CCDS75133.1 EPHA5 gene_id:2044|Hs108|chr4 (1038) 1072 249.1 1e-65
CCDS46876.1 EPHA6 gene_id:285220|Hs108|chr3 (1130) 1055 245.3 1.5e-64
CCDS30626.1 EPHA8 gene_id:2046|Hs108|chr1 ( 495) 1017 236.6 2.9e-62
CCDS225.1 EPHA8 gene_id:2046|Hs108|chr1 (1005) 1017 236.8 5.1e-62
CCDS46921.1 EPHB1 gene_id:2047|Hs108|chr3 ( 984) 940 219.5 7.8e-57
CCDS169.1 EPHA2 gene_id:1969|Hs108|chr1 ( 976) 939 219.3 9.1e-57
CCDS229.2 EPHB2 gene_id:2048|Hs108|chr1 ( 986) 914 213.7 4.5e-55
CCDS230.1 EPHB2 gene_id:2048|Hs108|chr1 ( 987) 914 213.7 4.5e-55
CCDS81279.1 EPHB2 gene_id:2048|Hs108|chr1 (1055) 914 213.7 4.7e-55
CCDS3268.1 EPHB3 gene_id:2049|Hs108|chr3 ( 998) 862 202.0 1.5e-51
CCDS5884.1 EPHA1 gene_id:2041|Hs108|chr7 ( 976) 805 189.3 1e-47
CCDS5706.1 EPHB4 gene_id:2050|Hs108|chr7 ( 987) 666 158.1 2.4e-38
CCDS5873.2 EPHB6 gene_id:2051|Hs108|chr7 (1022) 274 70.3 6.9e-12
>>CCDS425.1 EPHA10 gene_id:284656|Hs108|chr1 (295 aa)
initn: 2045 init1: 2045 opt: 2045 Z-score: 2479.8 bits: 466.8 E(32554): 8.4e-132
Smith-Waterman score: 2045; 99.7% identity (100.0% similar) in 295 aa overlap (1-295:1-295)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
190 200 210 220 230 240
250 260 270 280 290
pF1KE3 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::::::::::::::::::::::::::::::::::::::::.::::::::::::::
CCDS42 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDFCEGIQLAGGRGVGV
250 260 270 280 290
>>CCDS41305.1 EPHA10 gene_id:284656|Hs108|chr1 (1008 aa)
initn: 1966 init1: 1966 opt: 1966 Z-score: 2376.4 bits: 449.5 E(32554): 4.8e-126
Smith-Waterman score: 1966; 99.6% identity (100.0% similar) in 283 aa overlap (1-283:1-283)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS41 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
190 200 210 220 230 240
250 260 270 280 290
pF1KE3 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::::::::::::::::::::::::::::::::::::::::.::
CCDS41 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDFCEACPPGFYKVSPRRPLCS
250 260 270 280 290 300
CCDS41 PCPEHSRALENASTFCVCQDSYARSPTDPPSASCTRPPSAPRDLQYSLSRSPLVLRLRWL
310 320 330 340 350 360
>>CCDS75494.1 EPHA7 gene_id:2045|Hs108|chr6 (279 aa)
initn: 1219 init1: 682 opt: 1215 Z-score: 1474.8 bits: 280.8 E(32554): 8e-76
Smith-Waterman score: 1215; 64.3% identity (82.7% similar) in 277 aa overlap (8-283:7-277)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: ..:: . : : . .:.::.::::::.:.:: : . : :::::
CCDS75 MVFQTRYPSWIILCYIWLLRFAHTG--EAQAAKEVLLLDSKAQQTELEWISSPPNGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
:::.::. ::::::::.:.::::.:::.:.:::.: .:::::::.::::::.:.::. :
CCDS75 ISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLG
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 TCKETFNVYYLETEADLGRG-RPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVRE
:::::::.:: ::. : ::. : : :::::::::::::::::::::::::::::
CCDS75 TCKETFNLYYYETDYDTGRNIRENLY----VKIDTIAADESFTQGDLGERKMKLNTEVRE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IGPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGT
:::::..::.:::::::::.:::::.::::.: . ...:: :: :.. : ::.:::: ::
CCDS75 IGPLSKKGFYLAFQDVGACIALVSVKVYYKKCWSIIENLAIFPDTVTGSEFSSLVEVRGT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 CVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::. .: : . :::::.:.::::::.:.: :.::.:..:: ::
CCDS75 CVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAGYQQKGDTCERK
240 250 260 270
>>CCDS5031.1 EPHA7 gene_id:2045|Hs108|chr6 (998 aa)
initn: 1219 init1: 682 opt: 1216 Z-score: 1468.0 bits: 281.4 E(32554): 1.9e-75
Smith-Waterman score: 1216; 63.3% identity (81.1% similar) in 286 aa overlap (8-292:7-282)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: ..:: . : : . .:.::.::::::.:.:: : . : :::::
CCDS50 MVFQTRYPSWIILCYIWLLRFAHTG--EAQAAKEVLLLDSKAQQTELEWISSPPNGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
:::.::. ::::::::.:.::::.:::.:.:::.: .:::::::.::::::.:.::. :
CCDS50 ISGLDENYTPIRTYQVCQVMEPNQNNWLRTNWISKGNAQRIFVELKFTLRDCNSLPGVLG
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 TCKETFNVYYLETEADLGRG-RPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVRE
:::::::.:: ::. : ::. : : :::::::::::::::::::::::::::::
CCDS50 TCKETFNLYYYETDYDTGRNIRENLY----VKIDTIAADESFTQGDLGERKMKLNTEVRE
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IGPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGT
:::::..::.:::::::::.:::::.::::.: . ...:: :: :.. : ::.:::: ::
CCDS50 IGPLSKKGFYLAFQDVGACIALVSVKVYYKKCWSIIENLAIFPDTVTGSEFSSLVEVRGT
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 CVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
::. .: : . :::::.:.::::::.:.: :.::.:..:: :: :::
CCDS50 CVSSAEEEAENAPRMHCSAEGEWLVPIGKCICKAGYQQKGDTCE----PCGRGFYKSSSQ
240 250 260 270 280
CCDS50 DLQCSRCPTHSFSDKEGSSRCECEDGYYRAPSDPPYVACTRPPSAPQNLIFNINQTTVSL
290 300 310 320 330 340
>>CCDS46875.1 EPHA3 gene_id:2042|Hs108|chr3 (539 aa)
initn: 1091 init1: 515 opt: 1095 Z-score: 1325.3 bits: 254.1 E(32554): 1.7e-67
Smith-Waterman score: 1095; 60.2% identity (83.8% similar) in 259 aa overlap (25-283:19-271)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: : ..:: :::::. :.:::: . ::.::::
CCDS46 MDCQLSILLLLSCSVLDSFGELIPQPSNEVNLLDSKTIQGELGWISYPSHGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
::::::: ::::::::::.. .:.:::.:.:. :. .:.:.:::.::::::.::: . :
CCDS46 ISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFTLRDCNSIPLVLG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
:::::::.::.:.. : : .. . ::::::::::::: :::.: .:::::.::.
CCDS46 TCKETFNLYYMESDDDHGV---KFREHQFTKIDTIAADESFTQMDLGDRILKLNTEIREV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
::....::.::::::::::::::::::.:.: ::..:: :: :. .. ..:::: :.:
CCDS46 GPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDS-QSLVEVRGSC
180 190 200 210 220 230
250 260 270 280 290
pF1KE3 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
: .:. : .::::.:...::::::.:.:::.::..::: .:.
CCDS46 VNNSKEE--DPPRMYCSTEGEWLVPIGKCSCNAGYEERGFMCQACRPGFYKALDGNMKCA
240 250 260 270 280
CCDS46 KCPPHSSTQEDGSMNCRCENNYFRADKDPPSMACTRPPSSPRNVISNINETSVILDWSWP
290 300 310 320 330 340
>>CCDS2922.1 EPHA3 gene_id:2042|Hs108|chr3 (983 aa)
initn: 1091 init1: 515 opt: 1095 Z-score: 1321.5 bits: 254.3 E(32554): 2.7e-67
Smith-Waterman score: 1095; 60.2% identity (83.8% similar) in 259 aa overlap (25-283:19-271)
10 20 30 40 50 60
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALPSNGWEE
.: : ..:: :::::. :.:::: . ::.::::
CCDS29 MDCQLSILLLLSCSVLDSFGELIPQPSNEVNLLDSKTIQGELGWISYPSHGWEE
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAAG
::::::: ::::::::::.. .:.:::.:.:. :. .:.:.:::.::::::.::: . :
CCDS29 ISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFTLRDCNSIPLVLG
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 TCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVREI
:::::::.::.:.. : : .. . ::::::::::::: :::.: .:::::.::.
CCDS29 TCKETFNLYYMESDDDHGV---KFREHQFTKIDTIAADESFTQMDLGDRILKLNTEIREV
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 GPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGTC
::....::.::::::::::::::::::.:.: ::..:: :: :. .. ..:::: :.:
CCDS29 GPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDS-QSLVEVRGSC
180 190 200 210 220 230
250 260 270 280 290
pF1KE3 VAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
: .:. : .::::.:...::::::.:.:::.::..::: .:.
CCDS29 VNNSKEE--DPPRMYCSTEGEWLVPIGKCSCNAGYEERGFMCQACRPGFYKALDGNMKCA
240 250 260 270 280
CCDS29 KCPPHSSTQEDGSMNCRCENNYFRADKDPPSMACTRPPSSPRNVISNINETSVILDWSWP
290 300 310 320 330 340
>>CCDS2447.1 EPHA4 gene_id:2043|Hs108|chr2 (986 aa)
initn: 1069 init1: 441 opt: 1087 Z-score: 1311.8 bits: 252.5 E(32554): 9.5e-67
Smith-Waterman score: 1087; 56.3% identity (78.5% similar) in 284 aa overlap (5-287:2-278)
10 20 30 40 50
pF1KE3 METCAGPHPLRLFLCRMQLCLALLLGPWRPGTAEEVILLDSKASQAELGWTALP-SNGWE
:: . :: : . .: :. . : :.:: ::::.. :.:::: : : .:::
CCDS24 MAGIFYFALFSCLFGICDAVTGSRVYP--ANEVTLLDSRSVQGELGWIASPLEGGWE
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 EISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGWISRGRGQRIFVELQFTLRDCSSIPGAA
:.: .::.. ::::::::::.::.:.:::.: ::.: .::...:..::::::.:.::.
CCDS24 EVSIMDEKNTPIRTYQVCNVMEPSQNNWLRTDWITREGAQRVYIEIKFTLRDCNSLPGVM
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 GTCKETFNVYYLETEADLGRGRPRLGGSRPRKIDTIAADESFTQGDLGERKMKLNTEVRE
::::::::.:: :.. : : . .. ::::::::::::: :.:.: ::::::.:.
CCDS24 GTCKETFNLYYYESDNDKER---FIRENQFVKIDTIAADESFTQVDIGDRIMKLNTEIRD
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 IGPLSRRGFHLAFQDVGACVALVSVRVYYKQCRATVRGLATFPATAAESAFSTLVEVAGT
.::::..::.:::::::::.:::::::.::.: :::.:: :: : . . :.:::: :.
CCDS24 VGPLSKKGFYLAFQDVGACIALVSVRVFYKKCPLTVRNLAQFPDTITGADTSSLVEVRGS
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 CVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCSAGFQERGDICEGIQLAGGRGVGV
:: .:: . . :.:.::::::::::.: : :.:: .::. :.. ..
CCDS24 CVNNSEEK--DVPKMYCGADGEWLVPIGNCLCNAGHEERSGECQACKIGYYKALSTDATC
240 250 260 270 280 290
CCDS24 AKCPPHSYSVWEGATSCTCDRGFFRADNDAASMPCTRPPSAPLNLISNVNETSVNLEWSS
300 310 320 330 340 350
>>CCDS75132.1 EPHA5 gene_id:2044|Hs108|chr4 (1004 aa)
initn: 1069 init1: 469 opt: 1072 Z-score: 1293.6 bits: 249.1 E(32554): 9.9e-66
Smith-Waterman score: 1072; 56.6% identity (80.1% similar) in 281 aa overlap (4-283:31-303)
10 20 30
pF1KE3 METC-AGPHPLRLFLCRMQLCLALLLGPWRPGT
: ..:. :. : . :: :: :
CCDS75 MRGSGPRGAGRRRPPSGGGDTPITPASLAGCYSAPRRAPLWTC-LLLCAALRTLLASP--
10 20 30 40 50
40 50 60 70 80 90
pF1KE3 AEEVILLDSKASQAELGWTALPSNGWEEISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGW
..:: ::::.. ...::: :.:.::::::. :::. ::.:::::.:.: ::.::: :.:
CCDS75 SNEVNLLDSRTVMGDLGWIAFPKNGWEEIGEVDENYAPIHTYQVCKVMEQNQNNWLLTSW
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE3 ISRGRGQRIFVELQFTLRDCSSIPGAAGTCKETFNVYYLETEADLGRGRPRLGGSRPRKI
:: ..:::.::.::::::.:.::. ::::::::.::.:.. . ::. . .. ::
CCDS75 ISNEGASRIFIELKFTLRDCNSLPGGLGTCKETFNMYYFESDDQNGRN---IKENQYIKI
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE3 DTIAADESFTQGDLGERKMKLNTEVREIGPLSRRGFHLAFQDVGACVALVSVRVYYKQCR
::::::::::. :::.: ::::::::..::::..::.:::::::::.::::::::::.:
CCDS75 DTIAADESFTELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE3 ATVRGLATFPATAAESAFSTLVEVAGTCVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCS
..:: ::.:: : . . : :.::.:.:: :: . ::.:::.:.::::::.:.: :.
CCDS75 SVVRHLAVFPDTITGADSSQLLEVSGSCVNHSVTDE--PPKMHCSAEGEWLVPIGKCMCK
240 250 260 270 280 290
280 290
pF1KE3 AGFQERGDICEGIQLAGGRGVGV
::..:.. :.
CCDS75 AGYEEKNGTCQVCRPGFFKASPHIQSCGKCPPHSYTHEEASTSCVCEKDYFRRESDPPTM
300 310 320 330 340 350
>>CCDS3514.1 EPHA5 gene_id:2044|Hs108|chr4 (1015 aa)
initn: 1069 init1: 469 opt: 1072 Z-score: 1293.5 bits: 249.1 E(32554): 1e-65
Smith-Waterman score: 1072; 56.6% identity (80.1% similar) in 281 aa overlap (4-283:31-303)
10 20 30
pF1KE3 METC-AGPHPLRLFLCRMQLCLALLLGPWRPGT
: ..:. :. : . :: :: :
CCDS35 MRGSGPRGAGRRRPPSGGGDTPITPASLAGCYSAPRRAPLWTC-LLLCAALRTLLASP--
10 20 30 40 50
40 50 60 70 80 90
pF1KE3 AEEVILLDSKASQAELGWTALPSNGWEEISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGW
..:: ::::.. ...::: :.:.::::::. :::. ::.:::::.:.: ::.::: :.:
CCDS35 SNEVNLLDSRTVMGDLGWIAFPKNGWEEIGEVDENYAPIHTYQVCKVMEQNQNNWLLTSW
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE3 ISRGRGQRIFVELQFTLRDCSSIPGAAGTCKETFNVYYLETEADLGRGRPRLGGSRPRKI
:: ..:::.::.::::::.:.::. ::::::::.::.:.. . ::. . .. ::
CCDS35 ISNEGASRIFIELKFTLRDCNSLPGGLGTCKETFNMYYFESDDQNGRN---IKENQYIKI
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE3 DTIAADESFTQGDLGERKMKLNTEVREIGPLSRRGFHLAFQDVGACVALVSVRVYYKQCR
::::::::::. :::.: ::::::::..::::..::.:::::::::.::::::::::.:
CCDS35 DTIAADESFTELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE3 ATVRGLATFPATAAESAFSTLVEVAGTCVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCS
..:: ::.:: : . . : :.::.:.:: :: . ::.:::.:.::::::.:.: :.
CCDS35 SVVRHLAVFPDTITGADSSQLLEVSGSCVNHSVTDE--PPKMHCSAEGEWLVPIGKCMCK
240 250 260 270 280 290
280 290
pF1KE3 AGFQERGDICEGIQLAGGRGVGV
::..:.. :.
CCDS35 AGYEEKNGTCQVCRPGFFKASPHIQSCGKCPPHSYTHEEASTSCVCEKDYFRRESDPPTM
300 310 320 330 340 350
>>CCDS75131.1 EPHA5 gene_id:2044|Hs108|chr4 (1016 aa)
initn: 1069 init1: 469 opt: 1072 Z-score: 1293.5 bits: 249.1 E(32554): 1e-65
Smith-Waterman score: 1072; 56.6% identity (80.1% similar) in 281 aa overlap (4-283:31-303)
10 20 30
pF1KE3 METC-AGPHPLRLFLCRMQLCLALLLGPWRPGT
: ..:. :. : . :: :: :
CCDS75 MRGSGPRGAGRRRPPSGGGDTPITPASLAGCYSAPRRAPLWTC-LLLCAALRTLLASP--
10 20 30 40 50
40 50 60 70 80 90
pF1KE3 AEEVILLDSKASQAELGWTALPSNGWEEISGVDEHDRPIRTYQVCNVLEPNQDNWLQTGW
..:: ::::.. ...::: :.:.::::::. :::. ::.:::::.:.: ::.::: :.:
CCDS75 SNEVNLLDSRTVMGDLGWIAFPKNGWEEIGEVDENYAPIHTYQVCKVMEQNQNNWLLTSW
60 70 80 90 100 110
100 110 120 130 140 150
pF1KE3 ISRGRGQRIFVELQFTLRDCSSIPGAAGTCKETFNVYYLETEADLGRGRPRLGGSRPRKI
:: ..:::.::.::::::.:.::. ::::::::.::.:.. . ::. . .. ::
CCDS75 ISNEGASRIFIELKFTLRDCNSLPGGLGTCKETFNMYYFESDDQNGRN---IKENQYIKI
120 130 140 150 160 170
160 170 180 190 200 210
pF1KE3 DTIAADESFTQGDLGERKMKLNTEVREIGPLSRRGFHLAFQDVGACVALVSVRVYYKQCR
::::::::::. :::.: ::::::::..::::..::.:::::::::.::::::::::.:
CCDS75 DTIAADESFTELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVGACIALVSVRVYYKKCP
180 190 200 210 220 230
220 230 240 250 260 270
pF1KE3 ATVRGLATFPATAAESAFSTLVEVAGTCVAHSEGEPGSPPRMHCGADGEWLVPVGRCSCS
..:: ::.:: : . . : :.::.:.:: :: . ::.:::.:.::::::.:.: :.
CCDS75 SVVRHLAVFPDTITGADSSQLLEVSGSCVNHSVTDE--PPKMHCSAEGEWLVPIGKCMCK
240 250 260 270 280 290
280 290
pF1KE3 AGFQERGDICEGIQLAGGRGVGV
::..:.. :.
CCDS75 AGYEEKNGTCQVCRPGFFKASPHIQSCGKCPPHSYTHEEASTSCVCEKDYFRRESDPPTM
300 310 320 330 340 350
295 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 14:43:32 2016 done: Mon Nov 7 14:43:32 2016
Total Scan time: 2.510 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]