Result of FASTA (omim) for
pFN21AE3529
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3529, 229 aa
1>>>pF1KE3529 229 - 229 aa - 229 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2783+/-0.000414; mu= 15.1959+/- 0.026
mean_var=95.1702+/-19.342, 0's: 0 Z-trim(113.1): 382 B-trim: 529 in 1/50
Lambda= 0.131469
statistics sampled from 21787 (22252) to 21787 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.635), E-opt: 0.2 (0.261), width: 16
Scan time: 6.330
The best scores are: opt bits E(85289)
XP_016884043 (OMIM: 605413) PREDICTED: rab-like pr ( 229) 1508 296.1 3.2e-80
XP_016884041 (OMIM: 605413) PREDICTED: rab-like pr ( 229) 1508 296.1 3.2e-80
XP_016884042 (OMIM: 605413) PREDICTED: rab-like pr ( 229) 1508 296.1 3.2e-80
NP_001003789 (OMIM: 605413) rab-like protein 2B is ( 229) 1508 296.1 3.2e-80
XP_016884044 (OMIM: 605413) PREDICTED: rab-like pr ( 229) 1508 296.1 3.2e-80
NP_001124393 (OMIM: 605413) rab-like protein 2B is ( 229) 1508 296.1 3.2e-80
NP_001124391 (OMIM: 605413) rab-like protein 2B is ( 229) 1508 296.1 3.2e-80
NP_001124392 (OMIM: 605413) rab-like protein 2B is ( 229) 1508 296.1 3.2e-80
XP_006712278 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1498 294.3 1.2e-79
XP_016858707 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1498 294.3 1.2e-79
XP_016858706 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1498 294.3 1.2e-79
XP_016858703 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1498 294.3 1.2e-79
XP_016858708 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1498 294.3 1.2e-79
NP_001293088 (OMIM: 605412) rab-like protein 2A is ( 229) 1498 294.3 1.2e-79
XP_016858702 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1498 294.3 1.2e-79
XP_016858705 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1498 294.3 1.2e-79
XP_016858704 (OMIM: 605412) PREDICTED: rab-like pr ( 229) 1498 294.3 1.2e-79
NP_001293087 (OMIM: 605412) rab-like protein 2A is ( 229) 1498 294.3 1.2e-79
XP_016884047 (OMIM: 605413) PREDICTED: rab-like pr ( 228) 1491 292.9 3e-79
NP_001124394 (OMIM: 605413) rab-like protein 2B is ( 228) 1491 292.9 3e-79
XP_016884046 (OMIM: 605413) PREDICTED: rab-like pr ( 228) 1491 292.9 3e-79
XP_016884045 (OMIM: 605413) PREDICTED: rab-like pr ( 228) 1491 292.9 3e-79
XP_011528977 (OMIM: 605413) PREDICTED: rab-like pr ( 228) 1491 292.9 3e-79
NP_009012 (OMIM: 605413) rab-like protein 2B isofo ( 228) 1491 292.9 3e-79
XP_016884039 (OMIM: 605413) PREDICTED: rab-like pr ( 235) 1486 292.0 5.8e-79
XP_011528975 (OMIM: 605413) PREDICTED: rab-like pr ( 235) 1486 292.0 5.8e-79
XP_016858709 (OMIM: 605412) PREDICTED: rab-like pr ( 228) 1481 291.0 1.1e-78
XP_016858711 (OMIM: 605412) PREDICTED: rab-like pr ( 228) 1481 291.0 1.1e-78
NP_038198 (OMIM: 605412) rab-like protein 2A isofo ( 228) 1481 291.0 1.1e-78
NP_009013 (OMIM: 605412) rab-like protein 2A isofo ( 228) 1481 291.0 1.1e-78
XP_016858710 (OMIM: 605412) PREDICTED: rab-like pr ( 228) 1481 291.0 1.1e-78
XP_016858700 (OMIM: 605412) PREDICTED: rab-like pr ( 235) 1476 290.1 2.2e-78
XP_016858699 (OMIM: 605412) PREDICTED: rab-like pr ( 235) 1476 290.1 2.2e-78
XP_016884040 (OMIM: 605413) PREDICTED: rab-like pr ( 234) 1469 288.8 5.4e-78
XP_016858701 (OMIM: 605412) PREDICTED: rab-like pr ( 234) 1459 286.9 2e-77
XP_016884035 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1132 224.9 9.6e-59
XP_016884032 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1132 224.9 9.6e-59
XP_011528970 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1132 224.9 9.6e-59
XP_011528971 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1132 224.9 9.6e-59
XP_016884033 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1132 224.9 9.6e-59
XP_011528972 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1132 224.9 9.6e-59
XP_011528973 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1132 224.9 9.6e-59
XP_016884034 (OMIM: 605413) PREDICTED: rab-like pr ( 239) 1132 224.9 9.6e-59
XP_016858694 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1127 223.9 1.9e-58
XP_011508811 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1127 223.9 1.9e-58
XP_005263626 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1127 223.9 1.9e-58
XP_016858696 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1127 223.9 1.9e-58
XP_016858695 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1127 223.9 1.9e-58
XP_006712270 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1127 223.9 1.9e-58
XP_005263627 (OMIM: 605412) PREDICTED: rab-like pr ( 239) 1127 223.9 1.9e-58
>>XP_016884043 (OMIM: 605413) PREDICTED: rab-like protei (229 aa)
initn: 1508 init1: 1508 opt: 1508 Z-score: 1561.3 bits: 296.1 E(85289): 3.2e-80
Smith-Waterman score: 1508; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE3 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
190 200 210 220
>>XP_016884041 (OMIM: 605413) PREDICTED: rab-like protei (229 aa)
initn: 1508 init1: 1508 opt: 1508 Z-score: 1561.3 bits: 296.1 E(85289): 3.2e-80
Smith-Waterman score: 1508; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE3 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
190 200 210 220
>>XP_016884042 (OMIM: 605413) PREDICTED: rab-like protei (229 aa)
initn: 1508 init1: 1508 opt: 1508 Z-score: 1561.3 bits: 296.1 E(85289): 3.2e-80
Smith-Waterman score: 1508; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE3 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
190 200 210 220
>>NP_001003789 (OMIM: 605413) rab-like protein 2B isofor (229 aa)
initn: 1508 init1: 1508 opt: 1508 Z-score: 1561.3 bits: 296.1 E(85289): 3.2e-80
Smith-Waterman score: 1508; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE3 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
190 200 210 220
>>XP_016884044 (OMIM: 605413) PREDICTED: rab-like protei (229 aa)
initn: 1508 init1: 1508 opt: 1508 Z-score: 1561.3 bits: 296.1 E(85289): 3.2e-80
Smith-Waterman score: 1508; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE3 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
190 200 210 220
>>NP_001124393 (OMIM: 605413) rab-like protein 2B isofor (229 aa)
initn: 1508 init1: 1508 opt: 1508 Z-score: 1561.3 bits: 296.1 E(85289): 3.2e-80
Smith-Waterman score: 1508; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE3 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
190 200 210 220
>>NP_001124391 (OMIM: 605413) rab-like protein 2B isofor (229 aa)
initn: 1508 init1: 1508 opt: 1508 Z-score: 1561.3 bits: 296.1 E(85289): 3.2e-80
Smith-Waterman score: 1508; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE3 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
190 200 210 220
>>NP_001124392 (OMIM: 605413) rab-like protein 2B isofor (229 aa)
initn: 1508 init1: 1508 opt: 1508 Z-score: 1561.3 bits: 296.1 E(85289): 3.2e-80
Smith-Waterman score: 1508; 100.0% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE3 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
190 200 210 220
>>XP_006712278 (OMIM: 605412) PREDICTED: rab-like protei (229 aa)
initn: 1498 init1: 1498 opt: 1498 Z-score: 1551.0 bits: 294.3 E(85289): 1.2e-79
Smith-Waterman score: 1498; 98.7% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
:::::::.::::::::::::::::::::::::::::::::::.:::::::::::::::::
XP_006 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE3 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
:::::::::::::::::::::::::::::::::::::::::::.:::::
XP_006 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
>>XP_016858707 (OMIM: 605412) PREDICTED: rab-like protei (229 aa)
initn: 1498 init1: 1498 opt: 1498 Z-score: 1551.0 bits: 294.3 E(85289): 1.2e-79
Smith-Waterman score: 1498; 98.7% identity (100.0% similar) in 229 aa overlap (1-229:1-229)
10 20 30 40 50 60
pF1KE3 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 HTATVDGRTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDVQRKVTYRNLSTWYTELR
:::::::.::::::::::::::::::::::::::::::::::.:::::::::::::::::
XP_016 HTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELR
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EFRPEIPCIVVANKIDADINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVS
130 140 150 160 170 180
190 200 210 220
pF1KE3 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEAASPHS
:::::::::::::::::::::::::::::::::::::::::::.:::::
XP_016 YKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS
190 200 210 220
229 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 17:00:01 2016 done: Mon Nov 7 17:00:02 2016
Total Scan time: 6.330 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]