Result of FASTA (ccds) for
pFN21AE3527
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3527, 429 aa
1>>>pF1KE3527 429 - 429 aa - 429 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8169+/-0.000823; mu= 20.8529+/- 0.050
mean_var=101.0002+/-26.494, 0's: 0 Z-trim(108.9): 95 B-trim: 1219 in 2/48
Lambda= 0.127618
statistics sampled from 10399 (10530) to 10399 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.696), E-opt: 0.2 (0.323), width: 16
Scan time: 2.920
The best scores are: opt bits E(32554)
CCDS652.1 PTGER3 gene_id:5733|Hs108|chr1 ( 374) 2475 466.3 2.2e-131
CCDS655.1 PTGER3 gene_id:5733|Hs108|chr1 ( 418) 2467 464.9 6.4e-131
CCDS656.1 PTGER3 gene_id:5733|Hs108|chr1 ( 390) 2422 456.6 1.9e-128
CCDS657.1 PTGER3 gene_id:5733|Hs108|chr1 ( 390) 2422 456.6 1.9e-128
CCDS44160.1 PTGER3 gene_id:5733|Hs108|chr1 ( 365) 2414 455.1 5.1e-128
CCDS658.1 PTGER3 gene_id:5733|Hs108|chr1 ( 388) 2408 454.0 1.1e-127
CCDS30759.1 PTGFR gene_id:5737|Hs108|chr1 ( 297) 457 94.7 1.3e-19
CCDS686.1 PTGFR gene_id:5737|Hs108|chr1 ( 359) 457 94.8 1.5e-19
CCDS12309.1 PTGER1 gene_id:5731|Hs108|chr19 ( 402) 406 85.5 1.1e-16
CCDS42467.1 TBXA2R gene_id:6915|Hs108|chr19 ( 343) 401 84.4 1.8e-16
CCDS54198.1 TBXA2R gene_id:6915|Hs108|chr19 ( 407) 401 84.5 2e-16
CCDS9707.1 PTGDR gene_id:5729|Hs108|chr14 ( 359) 376 79.9 4.6e-15
CCDS12686.1 PTGIR gene_id:5739|Hs108|chr19 ( 386) 372 79.2 7.9e-15
CCDS9708.1 PTGER2 gene_id:5732|Hs108|chr14 ( 358) 365 77.8 1.9e-14
CCDS3930.1 PTGER4 gene_id:5734|Hs108|chr5 ( 488) 355 76.2 8e-14
CCDS61454.1 PTGDR gene_id:5729|Hs108|chr14 ( 296) 310 67.6 1.8e-11
>>CCDS652.1 PTGER3 gene_id:5733|Hs108|chr1 (374 aa)
initn: 2466 init1: 2466 opt: 2475 Z-score: 2472.4 bits: 466.3 E(32554): 2.2e-131
Smith-Waterman score: 2475; 99.5% identity (99.5% similar) in 372 aa overlap (1-370:1-372)
10 20 30 40 50 60
pF1KE3 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQM
310 320 330 340 350 360
370 380 390 400 410
pF1KE3 RKRRLREQ--FWRPASSGSGCQQIRCLMESCSLTQTGVQWSDFRSLQPSPPPLTAIFASW
:::::::: ::
CCDS65 RKRRLREQEEFWGN
370
>>CCDS655.1 PTGER3 gene_id:5733|Hs108|chr1 (418 aa)
initn: 2467 init1: 2467 opt: 2467 Z-score: 2463.9 bits: 464.9 E(32554): 6.4e-131
Smith-Waterman score: 2467; 99.7% identity (100.0% similar) in 369 aa overlap (1-369:1-369)
10 20 30 40 50 60
pF1KE3 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQM
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 RKRRLREQFWRPASSGSGCQQIRCLMESCSLTQTGVQWSDFRSLQPSPPPLTAIFASWVQ
::::::::.
CCDS65 RKRRLREQLICSLQNSQIQRATAHCGQVQTYRVLNREEMEVLVSSINVYTRISTVKTE
370 380 390 400 410
>>CCDS656.1 PTGER3 gene_id:5733|Hs108|chr1 (390 aa)
initn: 2416 init1: 2416 opt: 2422 Z-score: 2419.4 bits: 456.6 E(32554): 1.9e-128
Smith-Waterman score: 2423; 92.2% identity (94.5% similar) in 400 aa overlap (1-400:1-386)
10 20 30 40 50 60
pF1KE3 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQM
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS65 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 RKRRLREQFWRPASSGSGCQQIRCLMESCSLTQTGVQWSDFRSLQPSPPPLTAIFASWVQ
: . . . .:.. :: :: : ..:::
CCDS65 R---YHTNNYASSSTSLPCQ--------CSST---LMWSDHLER
370 380 390
pF1KE3 VILLPQPPK
>>CCDS657.1 PTGER3 gene_id:5733|Hs108|chr1 (390 aa)
initn: 2416 init1: 2416 opt: 2422 Z-score: 2419.4 bits: 456.6 E(32554): 1.9e-128
Smith-Waterman score: 2423; 92.2% identity (94.5% similar) in 400 aa overlap (1-400:1-386)
10 20 30 40 50 60
pF1KE3 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQM
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS65 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQI
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 RKRRLREQFWRPASSGSGCQQIRCLMESCSLTQTGVQWSDFRSLQPSPPPLTAIFASWVQ
: . . . .:.. :: :: : ..:::
CCDS65 R---YHTNNYASSSTSLPCQ--------CSST---LMWSDHLER
370 380 390
pF1KE3 VILLPQPPK
>>CCDS44160.1 PTGER3 gene_id:5733|Hs108|chr1 (365 aa)
initn: 2407 init1: 2407 opt: 2414 Z-score: 2411.8 bits: 455.1 E(32554): 5.1e-128
Smith-Waterman score: 2414; 97.8% identity (98.1% similar) in 370 aa overlap (1-370:1-363)
10 20 30 40 50 60
pF1KE3 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQM
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQ-
310 320 330 340 350
370 380 390 400 410 420
pF1KE3 RKRRLREQFWRPASSGSGCQQIRCLMESCSLTQTGVQWSDFRSLQPSPPPLTAIFASWVQ
:.::
CCDS44 ------EEFWGN
360
>>CCDS658.1 PTGER3 gene_id:5733|Hs108|chr1 (388 aa)
initn: 2408 init1: 2408 opt: 2408 Z-score: 2405.5 bits: 454.0 E(32554): 1.1e-127
Smith-Waterman score: 2408; 99.7% identity (100.0% similar) in 360 aa overlap (1-360:1-360)
10 20 30 40 50 60
pF1KE3 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 TGFVGNALAMLLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRW
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 EHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLG
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 VWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLL
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS65 ALTVTFSCNLATIKALVSRCRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQM
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
CCDS65 MMLKMIFNQTSVEHCKTHTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 RKRRLREQFWRPASSGSGCQQIRCLMESCSLTQTGVQWSDFRSLQPSPPPLTAIFASWVQ
CCDS65 ANAVSSCSNDGQKGQPISLSNEIIQTEA
370 380
>>CCDS30759.1 PTGFR gene_id:5737|Hs108|chr1 (297 aa)
initn: 530 init1: 386 opt: 457 Z-score: 465.5 bits: 94.7 E(32554): 1.3e-19
Smith-Waterman score: 541; 34.9% identity (66.9% similar) in 272 aa overlap (50-321:28-284)
20 30 40 50 60 70
pF1KE3 SYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLLTGFVGNALAMLLVSRSYRR
.:: : . .. .:...:.::. .. ..:.:
CCDS30 MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQR
10 20 30 40 50
80 90 100 110 120 130
pF1KE3 RESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEHIDPSGRLCTFFGLTMTV
..: : :::: . :..::. :.:.. ... :: : ..: ..: :. ::..::. :.
CCDS30 FRQKSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVF
60 70 80 90 100 110
140 150 160 170 180 190
pF1KE3 FGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLGVWLAVLAFALLPVLGVGQY
:: :...:.::.:: ... : ...... .. .. .: :: : .. .::::.:: .:
CCDS30 SGLCPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDY
120 130 140 150 160 170
200 210 220 230 240 250
pF1KE3 TVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSR
.: :::: .: . ..: . :. :.::::::: :.. :: : .:. :
CCDS30 KIQASRTWCFYNT-------EDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLL-R
180 190 200 210 220
260 270 280 290 300 310
pF1KE3 CRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLIMMLKMIFNQTSVEHCKTHT
. : ::. : : .:::..:::: .::::.: . ..:.: :. :..
CCDS30 VKFK---SQQHRQGRSHHLEMVIQLLAIMCVSCICWSPFLGY--RIILNGK--EKYKVYE
230 240 250 260 270 280
320 330 340 350 360 370
pF1KE3 EKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQMRKRRLREQFWRPASSGSGC
:.
CCDS30 EQSDFLHRLQWPTLE
290
>>CCDS686.1 PTGFR gene_id:5737|Hs108|chr1 (359 aa)
initn: 635 init1: 386 opt: 457 Z-score: 464.6 bits: 94.8 E(32554): 1.5e-19
Smith-Waterman score: 668; 36.5% identity (67.6% similar) in 312 aa overlap (50-360:28-318)
20 30 40 50 60 70
pF1KE3 SYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLLTGFVGNALAMLLVSRSYRR
.:: : . .. .:...:.::. .. ..:.:
CCDS68 MSMNNSKQLVSPAAALLSNTTCQTENRLSVFFSVIFMTVGILSNSLAIAILMKAYQR
10 20 30 40 50
80 90 100 110 120 130
pF1KE3 RESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEHIDPSGRLCTFFGLTMTV
..: : :::: . :..::. :.:.. ... :: : ..: ..: :. ::..::. :.
CCDS68 FRQKSKASFLLLASGLVITDFFGHLINGAIAVFVYASDKEWIRFDQSNVLCSIFGICMVF
60 70 80 90 100 110
140 150 160 170 180 190
pF1KE3 FGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLGVWLAVLAFALLPVLGVGQY
:: :...:.::.:: ... : ...... .. .. .: :: : .. .::::.:: .:
CCDS68 SGLCPLLLGSVMAIERCIGVTKPIFHSTKITSKHVKMMLSGVCLFAVFIALLPILGHRDY
120 130 140 150 160 170
200 210 220 230 240 250
pF1KE3 TVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSR
.: :::: .: . ..: . :. :.::::::: :.. :: : .:. :
CCDS68 KIQASRTWCFYNT-------EDIKDWEDRFYLLLFSFLGLLALGVSLLCNAITGITLL-R
180 190 200 210 220
260 270 280 290 300 310
pF1KE3 CRAKATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLIMMLKMIFNQT-SVEHCKTH
. : ::. : : .:::..:::: .::::.:. : .. .: . :.: :.:
CCDS68 VKFK---SQQHRQGRSHHLEMVIQLLAIMCVSCICWSPFLVTMANIGINGNHSLETCETT
230 240 250 260 270 280
320 330 340 350 360 370
pF1KE3 TEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQMRKRRLREQFWRPASSGSG
:.:.:.:. :::::::::.:::: .:... ..
CCDS68 ----------LFALRMATWNQILDPWVYILLRKAVLKNLYKLASQCCGVHVISLHIWELS
290 300 310 320 330
380 390 400 410 420
pF1KE3 CQQIRCLMESCSLTQTGVQWSDFRSLQPSPPPLTAIFASWVQVILLPQPPK
CCDS68 SIKNSLKVAAISESPVAEKSAST
340 350
>>CCDS12309.1 PTGER1 gene_id:5731|Hs108|chr19 (402 aa)
initn: 529 init1: 216 opt: 406 Z-score: 413.3 bits: 85.5 E(32554): 1.1e-16
Smith-Waterman score: 545; 32.6% identity (56.2% similar) in 390 aa overlap (14-360:4-365)
10 20 30 40 50 60
pF1KE3 MKETRGYGGDAPFCTRLNHSYTGMWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLL
: :: : .: : .: : . : :: .: :.:: .
CCDS12 MSPCGPLNLSLAGE-ATTCAAPWVPNTSAVPPSG-----ASPALPIFSMT
10 20 30 40
70 80 90 100 110
pF1KE3 TGFVGNALAM-LLVSRSYRRRESKRKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQR
: :.: ::. ::.. . : :. . .::: .. : :::.:... .:. .: . .
CCDS12 LGAVSNLLALALLAQAAGRLRRRRSAATFLLFVASLLATDLAGHVIPGALVLRLYTAGRA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE3 WEHIDPSGRLCTFFGLTMTVFGLSSLFIASAMAVERALAIRAPHWYASHMKTRATRAVLL
:.: : :.: :. ::: :... .::::: ... : .:..... .: .:
CCDS12 -----PAGGACHFLGGCMVFFGLCPLLLGCGMAVERCVGVTRPLLHAARVSVARARLALA
110 120 130 140 150
180 190 200 210 220 230
pF1KE3 GVWLAVLAFALLPVLGVGQYTVQWPGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGL
.: ..:: ::::. ::.: .:.:::::::. : :. : . ..:. :: :::
CCDS12 AVAAVALAVALLPLARVGRYELQYPGTWCFIGLGPPGG-------WRQALLAGLFASLGL
160 170 180 190 200 210
240 250 260 270 280
pF1KE3 LALTVTFSCNLATIKALVS---RCRAK----ATASQSSAQWG-------RITTETAI---
.:: ... :: . ::. : :.. :.. .: .:: .. ..:
CCDS12 VALLAALVCNTLSGLALLRARWRRRSRRPPPASGPDSRRRWGAHGPRSASASSASSIASA
220 230 240 250 260 270
290 300 310
pF1KE3 -------------------------QLMGIMCVLSVCWSPLLIMMLKMIFNQTSVEHCKT
::.::: : .::::.:... . . .:
CCDS12 STFFGGSRSSGSARRARAHDVEMVGQLVGIMVVSCICWSPMLVLVALAVGGWSS------
280 290 300 310 320
320 330 340 350 360 370
pF1KE3 HTEKQKECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQMRKRRLREQFWRPASSGS
: :. ...:::::: :::::::::.:::. .::.. ..
CCDS12 -TSLQRP---LFLAVRLASWNQILDPWVYILLRQAVLRQLLRLLPPRAGAKGGPAGLGLT
330 340 350 360 370 380
380 390 400 410 420
pF1KE3 GCQQIRCLMESCSLTQTGVQWSDFRSLQPSPPPLTAIFASWVQVILLPQPPK
CCDS12 PSAWEASSLRSSRHSGLSHF
390 400
>>CCDS42467.1 TBXA2R gene_id:6915|Hs108|chr19 (343 aa)
initn: 574 init1: 371 opt: 401 Z-score: 409.1 bits: 84.4 E(32554): 1.8e-16
Smith-Waterman score: 621; 34.5% identity (64.3% similar) in 328 aa overlap (54-380:30-343)
30 40 50 60 70 80
pF1KE3 MWAPERSAEARGNLTRPPGSGEDCGSVSVAFPITMLLTGFVGNALAMLLVSRSYRRRESK
: .. ..:...: ::. ... . :. :.
CCDS42 MWPNGSSLGPCFRPTNITLEERRLIASPWFAASFCVVGLASNLLALSVLA-GARQGGSH
10 20 30 40 50
90 100 110 120 130 140
pF1KE3 RKKSFLLCIGWLALTDLVGQLLTTPVVIVVYLSKQRWEHIDPSGRLCTFFGLTMTVFGLS
..::: . :.:::..: :.: .:. . . .:. .::. ::: :.:..: ::::
CCDS42 TRSSFLTFLCGLVLTDFLGLLVTGTIVVSQHAALFEWHAVDPGCRLCRFMGVVMIFFGLS
60 70 80 90 100 110
150 160 170 180 190 200
pF1KE3 SLFIASAMAVERALAIRAPHWYASHMKTRATRAVLLGVWLAVLAFALLPVLGVGQYTVQW
:....::: :: :.: : . . : . :.. :: :.::..:::.::::.::::.
CCDS42 PLLLGAAMASERYLGITRPFSRPAVASQRRAWATVGLVWAAALALGLLPLLGVGRYTVQY
120 130 140 150 160 170
210 220 230 240 250 260
pF1KE3 PGTWCFISTGRGGNGTSSSHNWGNLFFASAFAFLGLLALTVTFSCNLATIKALVSRCRAK
::.:::.. : . :.. :. :..:: :.. ..: : ... .: ...
CCDS42 PGSWCFLTLGAES---------GDVAFGLLFSMLGGLSVGLSFLLNTVSVATLCHVYHGQ
180 190 200 210 220
270 280 290 300 310 320
pF1KE3 ATASQSSAQWGRITTETAIQLMGIMCVLSVCWSPLLIMMLKMIFNQTSVEHCKTHTEKQK
.:.: . .: ::.::: : :::: :::... . .. . . . .
CCDS42 EAAQQRPRD---SEVEMMAQLLGIMVVASVCWLPLLVFIAQTVLRNPPAMSPAGQLSRTT
230 240 250 260 270 280
330 340 350 360 370 380
pF1KE3 ECNFFLIAVRLASLNQILDPWVYLLLRKILLRKFCQMRKRRLREQFWRPA-SSGSGCQQI
: . .:: .:.:. :::::::::.:.:. .::.. . : : .: .. :: :
CCDS42 E-KELLIYLRVATWNQILDPWVYILFRRAVLRRLQPRLSTRPRSLSLQPQLTQRSGLQ
290 300 310 320 330 340
390 400 410 420
pF1KE3 RCLMESCSLTQTGVQWSDFRSLQPSPPPLTAIFASWVQVILLPQPPK
429 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 17:42:46 2016 done: Fri Nov 4 17:42:46 2016
Total Scan time: 2.920 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]