Result of FASTA (omim) for
pFN21AE3522
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3522, 712 aa
1>>>pF1KE3522 712 - 712 aa - 712 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.6107+/-0.000421; mu= 13.2016+/- 0.026
mean_var=91.7210+/-19.126, 0's: 0 Z-trim(113.6): 215 B-trim: 681 in 1/53
Lambda= 0.133918
statistics sampled from 22797 (23017) to 22797 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.27), width: 16
Scan time: 10.500
The best scores are: opt bits E(85289)
NP_115523 (OMIM: 610993) ubiquitin carboxyl-termin ( 712) 4847 947.2 0
NP_001265322 (OMIM: 610993) ubiquitin carboxyl-ter ( 712) 4847 947.2 0
XP_016875498 (OMIM: 610993) PREDICTED: ubiquitin c ( 712) 4847 947.2 0
NP_001035862 (OMIM: 610993) ubiquitin carboxyl-ter ( 712) 4847 947.2 0
XP_016875499 (OMIM: 610993) PREDICTED: ubiquitin c ( 712) 4847 947.2 0
XP_016875500 (OMIM: 610993) PREDICTED: ubiquitin c ( 712) 4847 947.2 0
XP_005269230 (OMIM: 610993) PREDICTED: ubiquitin c ( 743) 3892 762.7 0
XP_011537107 (OMIM: 610993) PREDICTED: ubiquitin c ( 743) 3892 762.7 0
XP_005269229 (OMIM: 610993) PREDICTED: ubiquitin c ( 743) 3892 762.7 0
XP_011537106 (OMIM: 610993) PREDICTED: ubiquitin c ( 743) 3892 762.7 0
XP_005269231 (OMIM: 610993) PREDICTED: ubiquitin c ( 743) 3892 762.7 0
XP_011537103 (OMIM: 610993) PREDICTED: ubiquitin c ( 743) 3892 762.7 0
XP_011537104 (OMIM: 610993) PREDICTED: ubiquitin c ( 743) 3892 762.7 0
XP_011537105 (OMIM: 610993) PREDICTED: ubiquitin c ( 743) 3892 762.7 0
XP_011537102 (OMIM: 610993) PREDICTED: ubiquitin c ( 743) 3892 762.7 0
XP_016875501 (OMIM: 610993) PREDICTED: ubiquitin c ( 561) 3660 717.8 2.8e-206
XP_011537108 (OMIM: 610993) PREDICTED: ubiquitin c ( 505) 3207 630.3 5.7e-180
XP_016878257 (OMIM: 604728) PREDICTED: ubiquitin c ( 351) 602 126.9 1.3e-28
XP_016878255 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 602 127.0 1.6e-28
XP_016878256 (OMIM: 604728) PREDICTED: ubiquitin c ( 435) 602 127.0 1.6e-28
NP_001243631 (OMIM: 604728) ubiquitin carboxyl-ter ( 476) 602 127.0 1.7e-28
XP_016878252 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 602 127.0 1.8e-28
XP_016878254 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 602 127.0 1.8e-28
XP_016878253 (OMIM: 604728) PREDICTED: ubiquitin c ( 498) 602 127.0 1.8e-28
NP_006528 (OMIM: 604728) ubiquitin carboxyl-termin ( 520) 602 127.0 1.9e-28
XP_005256632 (OMIM: 612116) PREDICTED: ubiquitin c ( 420) 315 71.5 7.6e-12
NP_056091 (OMIM: 612116) ubiquitin carboxyl-termin ( 525) 315 71.5 9.3e-12
NP_001138545 (OMIM: 300975,300984) ubiquitin carbo ( 438) 310 70.5 1.5e-11
XP_016883750 (OMIM: 604735) PREDICTED: ubiquitin c ( 513) 253 59.6 3.7e-08
XP_016883749 (OMIM: 604735) PREDICTED: ubiquitin c ( 513) 253 59.6 3.7e-08
XP_016883747 (OMIM: 604735) PREDICTED: ubiquitin c ( 822) 253 59.6 5.6e-08
NP_001001992 (OMIM: 604735) ubiquitin carboxyl-ter ( 822) 253 59.6 5.6e-08
XP_016883748 (OMIM: 604735) PREDICTED: ubiquitin c ( 822) 253 59.6 5.6e-08
NP_006438 (OMIM: 604735) ubiquitin carboxyl-termin ( 823) 253 59.6 5.6e-08
XP_016883746 (OMIM: 604735) PREDICTED: ubiquitin c ( 823) 253 59.6 5.6e-08
NP_001027582 (OMIM: 604735) ubiquitin carboxyl-ter ( 823) 253 59.6 5.6e-08
XP_016856213 (OMIM: 615146) PREDICTED: ubiquitin c ( 812) 243 57.7 2.1e-07
XP_016856212 (OMIM: 615146) PREDICTED: ubiquitin c ( 820) 243 57.7 2.1e-07
NP_963920 (OMIM: 615146) ubiquitin carboxyl-termin ( 828) 243 57.7 2.1e-07
XP_005270706 (OMIM: 615146) PREDICTED: ubiquitin c ( 851) 243 57.7 2.2e-07
XP_016856211 (OMIM: 615146) PREDICTED: ubiquitin c ( 903) 243 57.7 2.3e-07
NP_963918 (OMIM: 615146) ubiquitin carboxyl-termin ( 911) 243 57.7 2.3e-07
XP_005270705 (OMIM: 615146) PREDICTED: ubiquitin c ( 934) 243 57.7 2.4e-07
NP_055832 (OMIM: 615146) ubiquitin carboxyl-termin ( 942) 243 57.7 2.4e-07
XP_011537091 (OMIM: 604986) PREDICTED: BRCA1-assoc ( 305) 223 53.7 1.3e-06
XP_016875483 (OMIM: 604986) PREDICTED: BRCA1-assoc ( 443) 223 53.7 1.8e-06
XP_016875484 (OMIM: 604986) PREDICTED: BRCA1-assoc ( 443) 223 53.7 1.8e-06
XP_016875482 (OMIM: 604986) PREDICTED: BRCA1-assoc ( 443) 223 53.7 1.8e-06
XP_016878210 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 227 54.6 2e-06
XP_016878211 (OMIM: 603158) PREDICTED: ubiquitin c ( 928) 227 54.6 2e-06
>>NP_115523 (OMIM: 610993) ubiquitin carboxyl-terminal h (712 aa)
initn: 4847 init1: 4847 opt: 4847 Z-score: 5062.1 bits: 947.2 E(85289): 0
Smith-Waterman score: 4847; 99.9% identity (100.0% similar) in 712 aa overlap (1-712:1-712)
10 20 30 40 50 60
pF1KE3 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FQESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRRTLSAIKSQNYHCTTRSGRFL
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_115 FQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
610 620 630 640 650 660
670 680 690 700 710
pF1KE3 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
670 680 690 700 710
>>NP_001265322 (OMIM: 610993) ubiquitin carboxyl-termina (712 aa)
initn: 4847 init1: 4847 opt: 4847 Z-score: 5062.1 bits: 947.2 E(85289): 0
Smith-Waterman score: 4847; 99.9% identity (100.0% similar) in 712 aa overlap (1-712:1-712)
10 20 30 40 50 60
pF1KE3 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FQESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRRTLSAIKSQNYHCTTRSGRFL
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_001 FQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
610 620 630 640 650 660
670 680 690 700 710
pF1KE3 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
670 680 690 700 710
>>XP_016875498 (OMIM: 610993) PREDICTED: ubiquitin carbo (712 aa)
initn: 4847 init1: 4847 opt: 4847 Z-score: 5062.1 bits: 947.2 E(85289): 0
Smith-Waterman score: 4847; 99.9% identity (100.0% similar) in 712 aa overlap (1-712:1-712)
10 20 30 40 50 60
pF1KE3 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FQESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRRTLSAIKSQNYHCTTRSGRFL
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_016 FQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
610 620 630 640 650 660
670 680 690 700 710
pF1KE3 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
670 680 690 700 710
>>NP_001035862 (OMIM: 610993) ubiquitin carboxyl-termina (712 aa)
initn: 4847 init1: 4847 opt: 4847 Z-score: 5062.1 bits: 947.2 E(85289): 0
Smith-Waterman score: 4847; 99.9% identity (100.0% similar) in 712 aa overlap (1-712:1-712)
10 20 30 40 50 60
pF1KE3 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FQESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRRTLSAIKSQNYHCTTRSGRFL
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_001 FQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
610 620 630 640 650 660
670 680 690 700 710
pF1KE3 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
670 680 690 700 710
>>XP_016875499 (OMIM: 610993) PREDICTED: ubiquitin carbo (712 aa)
initn: 4847 init1: 4847 opt: 4847 Z-score: 5062.1 bits: 947.2 E(85289): 0
Smith-Waterman score: 4847; 99.9% identity (100.0% similar) in 712 aa overlap (1-712:1-712)
10 20 30 40 50 60
pF1KE3 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FQESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRRTLSAIKSQNYHCTTRSGRFL
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_016 FQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
610 620 630 640 650 660
670 680 690 700 710
pF1KE3 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
670 680 690 700 710
>>XP_016875500 (OMIM: 610993) PREDICTED: ubiquitin carbo (712 aa)
initn: 4847 init1: 4847 opt: 4847 Z-score: 5062.1 bits: 947.2 E(85289): 0
Smith-Waterman score: 4847; 99.9% identity (100.0% similar) in 712 aa overlap (1-712:1-712)
10 20 30 40 50 60
pF1KE3 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FQESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRRTLSAIKSQNYHCTTRSGRFL
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_016 FQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNM
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EPYCCRETLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMC
610 620 630 640 650 660
670 680 690 700 710
pF1KE3 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TMDEVCKAQAYILFYTQRVTENGHSKLLPPELLLGSQHPNEDADTSSNEILS
670 680 690 700 710
>>XP_005269230 (OMIM: 610993) PREDICTED: ubiquitin carbo (743 aa)
initn: 4826 init1: 3892 opt: 3892 Z-score: 4064.7 bits: 762.7 E(85289): 0
Smith-Waterman score: 4767; 95.6% identity (95.7% similar) in 743 aa overlap (1-712:1-743)
10 20 30 40 50 60
pF1KE3 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FQESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRRTLSAIKSQNYHCTTRSGRFL
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_005 FQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
490 500 510 520 530 540
550 560 570
pF1KE3 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFR----------------------
:::::::::::::::::::::::::::::::::::::
XP_005 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFSTNSLCILINTLLAMLRSSNGKY
550 560 570 580 590 600
580 590 600 610 620
pF1KE3 ---------WSGRNNREKIGVHVGFEEILNMEPYCCRETLKSLRPECFIYDLSAVVMHHG
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DQQTEKITGWSGRNNREKIGVHVGFEEILNMEPYCCRETLKSLRPECFIYDLSAVVMHHG
610 620 630 640 650 660
630 640 650 660 670 680
pF1KE3 KGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLP
670 680 690 700 710 720
690 700 710
pF1KE3 PELLLGSQHPNEDADTSSNEILS
:::::::::::::::::::::::
XP_005 PELLLGSQHPNEDADTSSNEILS
730 740
>>XP_011537107 (OMIM: 610993) PREDICTED: ubiquitin carbo (743 aa)
initn: 4826 init1: 3892 opt: 3892 Z-score: 4064.7 bits: 762.7 E(85289): 0
Smith-Waterman score: 4767; 95.6% identity (95.7% similar) in 743 aa overlap (1-712:1-743)
10 20 30 40 50 60
pF1KE3 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FQESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRRTLSAIKSQNYHCTTRSGRFL
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_011 FQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
490 500 510 520 530 540
550 560 570
pF1KE3 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFR----------------------
:::::::::::::::::::::::::::::::::::::
XP_011 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFSTNSLCILINTLLAMLRSSNGKY
550 560 570 580 590 600
580 590 600 610 620
pF1KE3 ---------WSGRNNREKIGVHVGFEEILNMEPYCCRETLKSLRPECFIYDLSAVVMHHG
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DQQTEKITGWSGRNNREKIGVHVGFEEILNMEPYCCRETLKSLRPECFIYDLSAVVMHHG
610 620 630 640 650 660
630 640 650 660 670 680
pF1KE3 KGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLP
670 680 690 700 710 720
690 700 710
pF1KE3 PELLLGSQHPNEDADTSSNEILS
:::::::::::::::::::::::
XP_011 PELLLGSQHPNEDADTSSNEILS
730 740
>>XP_005269229 (OMIM: 610993) PREDICTED: ubiquitin carbo (743 aa)
initn: 4826 init1: 3892 opt: 3892 Z-score: 4064.7 bits: 762.7 E(85289): 0
Smith-Waterman score: 4767; 95.6% identity (95.7% similar) in 743 aa overlap (1-712:1-743)
10 20 30 40 50 60
pF1KE3 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FQESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRRTLSAIKSQNYHCTTRSGRFL
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_005 FQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
490 500 510 520 530 540
550 560 570
pF1KE3 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFR----------------------
:::::::::::::::::::::::::::::::::::::
XP_005 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFSTNSLCILINTLLAMLRSSNGKY
550 560 570 580 590 600
580 590 600 610 620
pF1KE3 ---------WSGRNNREKIGVHVGFEEILNMEPYCCRETLKSLRPECFIYDLSAVVMHHG
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DQQTEKITGWSGRNNREKIGVHVGFEEILNMEPYCCRETLKSLRPECFIYDLSAVVMHHG
610 620 630 640 650 660
630 640 650 660 670 680
pF1KE3 KGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLP
670 680 690 700 710 720
690 700 710
pF1KE3 PELLLGSQHPNEDADTSSNEILS
:::::::::::::::::::::::
XP_005 PELLLGSQHPNEDADTSSNEILS
730 740
>>XP_011537106 (OMIM: 610993) PREDICTED: ubiquitin carbo (743 aa)
initn: 4826 init1: 3892 opt: 3892 Z-score: 4064.7 bits: 762.7 E(85289): 0
Smith-Waterman score: 4767; 95.6% identity (95.7% similar) in 743 aa overlap (1-712:1-743)
10 20 30 40 50 60
pF1KE3 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MLAMDTCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKH
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FQESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRRTLSAIKSQNYHCTTRSGRFL
::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_011 FQESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIKSQNYHCTTRSGRFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RSMGTGDDSYFLHDGAQSLLQSEDQLYTALWHRRRILMGKIFRTWFEQSPIGRKKQEEPF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QEKIVVKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAQSTIIEIVSVQVPAQTPASP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AKDKVLSTSENEISQKVSDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQC
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FLKLDLNQWLAMTASEKTRSCKHPPVTDTVVYQMNECQEKDTGFVCSRQSSLSSGLSGGA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SKGRKMELIQPKEPTSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QQDAQEFLCELLDKIQRELETTGTSLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQC
490 500 510 520 530 540
550 560 570
pF1KE3 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFR----------------------
:::::::::::::::::::::::::::::::::::::
XP_011 NSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFSTNSLCILINTLLAMLRSSNGKY
550 560 570 580 590 600
580 590 600 610 620
pF1KE3 ---------WSGRNNREKIGVHVGFEEILNMEPYCCRETLKSLRPECFIYDLSAVVMHHG
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DQQTEKITGWSGRNNREKIGVHVGFEEILNMEPYCCRETLKSLRPECFIYDLSAVVMHHG
610 620 630 640 650 660
630 640 650 660 670 680
pF1KE3 KGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLP
670 680 690 700 710 720
690 700 710
pF1KE3 PELLLGSQHPNEDADTSSNEILS
:::::::::::::::::::::::
XP_011 PELLLGSQHPNEDADTSSNEILS
730 740
712 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 03:11:36 2016 done: Mon Nov 7 03:11:37 2016
Total Scan time: 10.500 Total Display time: 0.190
Function used was FASTA [36.3.4 Apr, 2011]