Result of FASTA (omim) for
pFN21AE3517
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3517, 221 aa
1>>>pF1KE3517 221 - 221 aa - 221 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0326+/-0.000394; mu= 14.6722+/- 0.025
mean_var=77.1624+/-15.913, 0's: 0 Z-trim(113.3): 412 B-trim: 557 in 1/54
Lambda= 0.146006
statistics sampled from 22021 (22532) to 22021 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.654), E-opt: 0.2 (0.264), width: 16
Scan time: 5.190
The best scores are: opt bits E(85289)
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 829 184.1 1.5e-46
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 820 182.2 5.5e-46
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 809 179.9 2.7e-45
XP_011511195 (OMIM: 615852) PREDICTED: ras-related ( 195) 784 174.6 1e-43
NP_115520 (OMIM: 612909) ras-related protein Rab-6 ( 254) 733 164.0 2.1e-40
NP_001230648 (OMIM: 179513) ras-related protein Ra ( 175) 718 160.7 1.4e-39
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 465 107.5 1.8e-23
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 465 107.5 1.8e-23
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 465 107.5 1.8e-23
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 465 107.5 1.8e-23
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 465 107.5 1.8e-23
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 465 107.5 2e-23
NP_001238965 (OMIM: 179514) ras-related protein Ra ( 215) 463 107.0 2.4e-23
XP_005269108 (OMIM: 179514) PREDICTED: ras-related ( 215) 463 107.0 2.4e-23
NP_002859 (OMIM: 179514) ras-related protein Rab-5 ( 215) 463 107.0 2.4e-23
XP_005269109 (OMIM: 179514) PREDICTED: ras-related ( 215) 463 107.0 2.4e-23
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 461 106.6 3.1e-23
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 432 100.5 2.4e-21
NP_006859 (OMIM: 605694) ras-related protein Rab-3 ( 195) 427 99.4 4.4e-21
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 427 99.4 4.6e-21
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 426 99.2 5.1e-21
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 424 98.8 7.5e-21
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 420 98.0 1.3e-20
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 419 97.7 1.5e-20
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 419 97.8 1.5e-20
XP_016881018 (OMIM: 605694) PREDICTED: ras-related ( 244) 419 97.8 1.7e-20
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 419 97.8 1.7e-20
XP_016881017 (OMIM: 605694) PREDICTED: ras-related ( 248) 419 97.8 1.7e-20
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 416 97.1 2.4e-20
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 416 97.1 2.4e-20
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 416 97.1 2.4e-20
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 412 96.3 4.3e-20
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 412 96.3 4.4e-20
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 411 96.1 4.6e-20
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 411 96.1 4.6e-20
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 411 96.1 4.6e-20
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 411 96.1 4.6e-20
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 405 94.8 1.1e-19
NP_065724 (OMIM: 612966) ras-related protein Rab-2 ( 194) 404 94.6 1.2e-19
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 404 94.7 1.5e-19
NP_055814 (OMIM: 612398) ras-related protein Rab-2 ( 225) 401 94.0 2.2e-19
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 399 93.6 2.8e-19
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 399 93.6 2.8e-19
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 397 93.1 3.4e-19
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 389 91.4 1.2e-18
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 389 91.4 1.2e-18
NP_004628 (OMIM: 600882,602298) ras-related protei ( 207) 385 90.6 2.1e-18
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 384 90.4 2.5e-18
XP_011519340 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 387 91.3 3e-18
XP_011519339 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 387 91.3 3e-18
>>NP_057661 (OMIM: 615852) ras-related protein Rab-6B [H (208 aa)
initn: 831 init1: 762 opt: 829 Z-score: 956.8 bits: 184.1 E(85289): 1.5e-46
Smith-Waterman score: 829; 65.2% identity (85.0% similar) in 207 aa overlap (11-214:1-198)
10 20 30 40 50
pF1KE3 MSAFGHDEAWMEAGG-FGLEAAERTEYQSLCKSKLLFLGEQS-GKTSIISRFMYNSFGCA
: ::: :: . : : ::.:::::: ::::.:.::::.:: .
NP_057 MSAGGDFG---------NPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNT
10 20 30 40
60 70 80 90 100 110
pF1KE3 CQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSF
:::.:::::::::::::. :.::::::::::::.:::::::::::.:::::::::.:::
NP_057 YQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSF
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE3 KETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGY
..:.::.. ::.:::.::.:::.::: :: .:::.: :.::.....:.::::::::::::
NP_057 QQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGY
110 120 130 140 150 160
180 190 200 210 220
pF1KE3 NVKKLFRRVASALLSTRT-SPPPKEGTVEIELESFEESGNRSYC
:::.::::::::: . .. . ::: ..:.:.. .:
NP_057 NVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC
170 180 190 200
>>NP_942599 (OMIM: 179513) ras-related protein Rab-6A is (208 aa)
initn: 800 init1: 759 opt: 820 Z-score: 946.6 bits: 182.2 E(85289): 5.5e-46
Smith-Waterman score: 820; 68.1% identity (88.8% similar) in 188 aa overlap (29-214:11-198)
10 20 30 40 50
pF1KE3 MSAFGHDEAWMEAGGFGLEAAERTEYQSLCKSKLLFLGEQS-GKTSIISRFMYNSFGCAC
: : ::.:::::: ::::.:.::::.:: .
NP_942 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTY
10 20 30 40
60 70 80 90 100 110
pF1KE3 QATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFK
:::.:::::::::::::. :.::::::::::::.:::::::::::.:::::::::.:::.
NP_942 QATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE3 ETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYN
.: ::.. ::.:::.::.:::.::: :: .::::. :.::.:...:::::::::::.:::
NP_942 QTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYN
110 120 130 140 150 160
180 190 200 210 220
pF1KE3 VKKLFRRVASALLSTRTSPP-PKEGTVEIELESFEESGNRSYC
::.::::::.:: . ... .: ..:.::. .:
NP_942 VKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSEGGCSC
170 180 190 200
>>NP_002860 (OMIM: 179513) ras-related protein Rab-6A is (208 aa)
initn: 789 init1: 748 opt: 809 Z-score: 934.1 bits: 179.9 E(85289): 2.7e-45
Smith-Waterman score: 809; 67.0% identity (88.3% similar) in 188 aa overlap (29-214:11-198)
10 20 30 40 50
pF1KE3 MSAFGHDEAWMEAGGFGLEAAERTEYQSLCKSKLLFLGEQS-GKTSIISRFMYNSFGCAC
: : ::.:::::: ::::.:.::::.:: .
NP_002 MSTGGDFGNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTY
10 20 30 40
60 70 80 90 100 110
pF1KE3 QATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFK
:::.:::::::::::::. ..::::::::::::.::::::::::. :::::::::.:::.
NP_002 QATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQ
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE3 ETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYN
.: ::.. ::.:::.::.:::.::: :: .::::. :.::.:...:::::::::::.:::
NP_002 QTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYN
110 120 130 140 150 160
180 190 200 210 220
pF1KE3 VKKLFRRVASALLSTRTSPP-PKEGTVEIELESFEESGNRSYC
::.::::::.:: . ... .: ..:.::. .:
NP_002 VKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSEGGCSC
170 180 190 200
>>XP_011511195 (OMIM: 615852) PREDICTED: ras-related pro (195 aa)
initn: 790 init1: 762 opt: 784 Z-score: 906.0 bits: 174.6 E(85289): 1e-43
Smith-Waterman score: 784; 68.4% identity (90.8% similar) in 174 aa overlap (42-214:12-185)
20 30 40 50 60 70
pF1KE3 EAGGFGLEAAERTEYQSLCKSKLLFLGEQSGKTSIISRFMYNSFGCACQATVGIDFLSKT
::::.:.::::.:: . :::.::::::::
XP_011 MWHMTRNWPLVGKTSLITRFMYDSFDNTYQATIGIDFLSKT
10 20 30 40
80 90 100 110 120 130
pF1KE3 MYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAE
:::::. :.::::::::::::.:::::::::::.:::::::::.:::..:.::.. ::.:
XP_011 MYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTE
50 60 70 80 90 100
140 150 160 170 180 190
pF1KE3 RGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASAL
::.::.:::.::: :: .:::.: :.::.....:.:::::::::::::::.:::::::::
XP_011 RGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASAL
110 120 130 140 150 160
200 210 220
pF1KE3 LSTRT-SPPPKEGTVEIELESFEESGNRSYC
. .. . ::: ..:.:.. .:
XP_011 PGMENVQEKSKEGMIDIKLDKPQEPPASEGGCSC
170 180 190
>>NP_115520 (OMIM: 612909) ras-related protein Rab-6C [H (254 aa)
initn: 717 init1: 676 opt: 733 Z-score: 846.4 bits: 164.0 E(85289): 2.1e-40
Smith-Waterman score: 733; 58.9% identity (79.7% similar) in 207 aa overlap (11-214:1-198)
10 20 30 40 50
pF1KE3 MSAFGHDEAWMEAGG-FGLEAAERTEYQSLCKSKLLFLGEQS-GKTSIISRFMYNSFGCA
: ::: :: . : : ::.:::::: .:::.:.:: :.:: .
NP_115 MSAGGDFG---------NPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNT
10 20 30 40
60 70 80 90 100 110
pF1KE3 CQATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSF
:: .::::::::::::: . :.:::::::::..:::: :::::. :::::::::.:::
NP_115 YQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQERLRSLIPRYIRDSAAAVVVYDITNVNSF
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE3 KETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGY
..: ::.. ::.:::.::.: :.::. :: .::::..:.::.:...::: :::: ::.::
NP_115 QQTTKWIDDVRTERGSDVIITLVGNRTDLADKRQVSVEEGERKAKGLNVTFIETRAKAGY
110 120 130 140 150 160
180 190 200 210 220
pF1KE3 NVKKLFRRVASALLSTRTSPP-PKEGTVEIELESFEESGNRSYC
:::.::::::.:: . ... .: .:.::. .:
NP_115 NVKQLFRRVAAALPGMESTQDGSREDMSDIKLEKPQEQTVSEGGCSCYSPMSSSTLPQKP
170 180 190 200 210 220
NP_115 PYSFIDCSVNIGLNLFPSLITFCNSSLLPVSWR
230 240 250
>>NP_001230648 (OMIM: 179513) ras-related protein Rab-6A (175 aa)
initn: 700 init1: 700 opt: 718 Z-score: 831.5 bits: 160.7 E(85289): 1.4e-39
Smith-Waterman score: 718; 66.1% identity (88.5% similar) in 165 aa overlap (51-214:1-165)
30 40 50 60 70 80
pF1KE3 AERTEYQSLCKSKLLFLGEQSGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQ
::.:: . :::.:::::::::::::. ..
NP_001 MYDSFDNTYQATIGIDFLSKTMYLEDRTIR
10 20 30
90 100 110 120 130 140
pF1KE3 LQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIML
::::::::::::.::::::::::. :::::::::.:::..: ::.. ::.:::.::.:::
NP_001 LQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIML
40 50 60 70 80 90
150 160 170 180 190
pF1KE3 LGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYNVKKLFRRVASALLSTRTSPP-
.::: :: .::::. :.::.:...:::::::::::.:::::.::::::.:: . ...
NP_001 VGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDR
100 110 120 130 140 150
200 210 220
pF1KE3 PKEGTVEIELESFEESGNRSYC
.: ..:.::. .:
NP_001 SREDMIDIKLEKPQEQPVSEGGCSC
160 170
>>NP_004153 (OMIM: 179512) ras-related protein Rab-5A is (215 aa)
initn: 470 init1: 427 opt: 465 Z-score: 542.3 bits: 107.5 E(85289): 1.8e-23
Smith-Waterman score: 465; 41.3% identity (75.6% similar) in 172 aa overlap (29-199:18-189)
10 20 30 40 50
pF1KE3 MSAFGHDEAWMEAGGFGLEAAERTEYQSLCKSKLLFLGEQS-GKTSIISRFMYNSFGCAC
.:. ::..:::.. ::.:.. ::. ..:
NP_004 MASRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQ
10 20 30 40
60 70 80 90 100 110
pF1KE3 QATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFK
..:.: ::..:. :.: :....::::::::.::: : : : . :.::::::: .::
NP_004 ESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFA
50 60 70 80 90 100
120 130 140 150 160 170
pF1KE3 ETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYN
.. .::.... . . ..:: : ::: :: ::: : .... . . ...:.::::::..:
NP_004 RAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMN
110 120 130 140 150 160
180 190 200 210 220
pF1KE3 VKKLFRRVASALLSTRTSPPPKEGTVEIELESFEESGNRSYC
:...: .:. : ... . :
NP_004 VNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPTQPTRNQCCSN
170 180 190 200 210
>>XP_011523393 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 444 init1: 425 opt: 465 Z-score: 542.2 bits: 107.5 E(85289): 1.8e-23
Smith-Waterman score: 465; 37.4% identity (72.7% similar) in 198 aa overlap (29-221:19-213)
10 20 30 40 50
pF1KE3 MSAFGHDEAWMEAGGFGLEAAERTEYQSLCKSKLLFLGEQS-GKTSIISRFMYNSFGCAC
.:. ::..:::.. ::.:.. ::. ..:
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQ
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 QATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFK
..:.: ::..:. :.: :....::::::::.::: : : : . :.::::::: ..:
XP_011 ESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 ETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYN
.. .::.... . . ..:: : ::: :: .:: : .... . . ...:.::::::..:
XP_011 RAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMN
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 VKKLFRRVASALLSTR----TSPPPKEGTVEIELESFEESGNRSYC
:...: .:. : ... :. : .. :... .. ..:: :
XP_011 VNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENN---PASRSQCCSN
180 190 200 210
>>XP_011523392 (OMIM: 604037) PREDICTED: ras-related pro (216 aa)
initn: 444 init1: 425 opt: 465 Z-score: 542.2 bits: 107.5 E(85289): 1.8e-23
Smith-Waterman score: 465; 37.4% identity (72.7% similar) in 198 aa overlap (29-221:19-213)
10 20 30 40 50
pF1KE3 MSAFGHDEAWMEAGGFGLEAAERTEYQSLCKSKLLFLGEQS-GKTSIISRFMYNSFGCAC
.:. ::..:::.. ::.:.. ::. ..:
XP_011 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQ
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 QATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFK
..:.: ::..:. :.: :....::::::::.::: : : : . :.::::::: ..:
XP_011 ESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 ETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYN
.. .::.... . . ..:: : ::: :: .:: : .... . . ...:.::::::..:
XP_011 RAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMN
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 VKKLFRRVASALLSTR----TSPPPKEGTVEIELESFEESGNRSYC
:...: .:. : ... :. : .. :... .. ..:: :
XP_011 VNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENN---PASRSQCCSN
180 190 200 210
>>NP_004574 (OMIM: 604037) ras-related protein Rab-5C is (216 aa)
initn: 444 init1: 425 opt: 465 Z-score: 542.2 bits: 107.5 E(85289): 1.8e-23
Smith-Waterman score: 465; 37.4% identity (72.7% similar) in 198 aa overlap (29-221:19-213)
10 20 30 40 50
pF1KE3 MSAFGHDEAWMEAGGFGLEAAERTEYQSLCKSKLLFLGEQS-GKTSIISRFMYNSFGCAC
.:. ::..:::.. ::.:.. ::. ..:
NP_004 MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQ
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 QATVGIDFLSKTMYLEDQIVQLQLWDTAGQERFHSLIPSYIRDSTIAVVVYDITNINSFK
..:.: ::..:. :.: :....::::::::.::: : : : . :.::::::: ..:
NP_004 ESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 ETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAKTGYN
.. .::.... . . ..:: : ::: :: .:: : .... . . ...:.::::::..:
NP_004 RAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMN
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 VKKLFRRVASALLSTR----TSPPPKEGTVEIELESFEESGNRSYC
:...: .:. : ... :. : .. :... .. ..:: :
NP_004 VNEIFMAIAKKLPKNEPQNATGAPGRNRGVDLQENN---PASRSQCCSN
180 190 200 210
221 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 22:32:45 2016 done: Sat Nov 5 22:32:46 2016
Total Scan time: 5.190 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]