Result of FASTA (omim) for
pFN21AE3425
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3425, 542 aa
1>>>pF1KE3425 542 - 542 aa - 542 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 10.9237+/-0.000392; mu= -4.8609+/- 0.024
mean_var=394.5905+/-82.618, 0's: 0 Z-trim(124.3): 68 B-trim: 732 in 1/58
Lambda= 0.064566
statistics sampled from 45516 (45629) to 45516 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.802), E-opt: 0.2 (0.535), width: 16
Scan time: 13.160
The best scores are: opt bits E(85289)
XP_011540239 (OMIM: 614804) PREDICTED: doublesex- ( 542) 3659 354.8 4e-97
NP_115486 (OMIM: 614804) doublesex- and mab-3-rela ( 542) 3659 354.8 4e-97
NP_071443 (OMIM: 614803) doublesex- and mab-3-rela ( 504) 513 61.7 6.2e-09
XP_016869864 (OMIM: 602424) PREDICTED: doublesex- ( 215) 446 55.1 2.6e-07
NP_068770 (OMIM: 602424) doublesex- and mab-3-rela ( 373) 436 54.4 7.3e-07
XP_006716795 (OMIM: 602424) PREDICTED: doublesex- ( 374) 436 54.4 7.3e-07
NP_006548 (OMIM: 604935) doublesex- and mab-3-rela ( 226) 374 48.4 2.8e-05
NP_001124337 (OMIM: 604935) doublesex- and mab-3-r ( 226) 374 48.4 2.8e-05
XP_016869705 (OMIM: 604935) PREDICTED: doublesex- ( 226) 374 48.4 2.8e-05
NP_067063 (OMIM: 614754) doublesex- and mab-3-rela ( 472) 379 49.2 3.4e-05
XP_016869703 (OMIM: 604935) PREDICTED: doublesex- ( 561) 374 48.8 5.3e-05
XP_011515992 (OMIM: 604935) PREDICTED: doublesex- ( 561) 374 48.8 5.3e-05
XP_016869704 (OMIM: 604935) PREDICTED: doublesex- ( 561) 374 48.8 5.3e-05
NP_870987 (OMIM: 604935) doublesex- and mab-3-rela ( 561) 374 48.8 5.3e-05
XP_011515989 (OMIM: 604935) PREDICTED: doublesex- ( 561) 374 48.8 5.3e-05
XP_016869702 (OMIM: 604935) PREDICTED: doublesex- ( 561) 374 48.8 5.3e-05
NP_149056 (OMIM: 614805) doublesex- and mab-3-rela ( 342) 337 45.1 0.00041
NP_001035373 (OMIM: 614806) doublesex- and mab-3-r ( 367) 320 43.6 0.0013
XP_016882618 (OMIM: 614806) PREDICTED: doublesex- ( 372) 320 43.6 0.0013
XP_016882617 (OMIM: 614806) PREDICTED: doublesex- ( 418) 307 42.4 0.0033
XP_016882614 (OMIM: 614806) PREDICTED: doublesex- ( 418) 307 42.4 0.0033
XP_016882615 (OMIM: 614806) PREDICTED: doublesex- ( 418) 307 42.4 0.0033
XP_016882616 (OMIM: 614806) PREDICTED: doublesex- ( 418) 307 42.4 0.0033
XP_016882613 (OMIM: 614806) PREDICTED: doublesex- ( 421) 307 42.4 0.0033
XP_016882612 (OMIM: 614806) PREDICTED: doublesex- ( 423) 307 42.4 0.0033
XP_011525518 (OMIM: 614806) PREDICTED: doublesex- ( 228) 285 40.1 0.0088
>>XP_011540239 (OMIM: 614804) PREDICTED: doublesex- and (542 aa)
initn: 3659 init1: 3659 opt: 3659 Z-score: 1864.7 bits: 354.8 E(85289): 4e-97
Smith-Waterman score: 3659; 100.0% identity (100.0% similar) in 542 aa overlap (1-542:1-542)
10 20 30 40 50 60
pF1KE3 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLLRGPPLLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLLRGPPLLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAAQVALRRQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAAQVALRRQQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEENEARELQLLYGTAEGLALAAANGIIPPRPAYEVFGSVCAADGGGPGAGAPAGTGGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QEENEARELQLLYGTAEGLALAAANGIIPPRPAYEVFGSVCAADGGGPGAGAPAGTGGGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 AGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPGTSSPEVRPGSGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPGTSSPEVRPGSGSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 NGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSESGSEADKEEGEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSESGSEADKEEGEAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 PAPGLGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PAPGLGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 GLGPAAPPDKAAVGAAAAADDAWPSRVDAAAAAAAAAGGPGLPAPLQAGPAAPPHHRPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GLGPAAPPDKAAVGAAAAADDAWPSRVDAAAAAAAAAGGPGLPAPLQAGPAAPPHHRPLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 AGAMAPGALGSLSSRSAFSPLQPNASHFGADAGAYPLGAPLGLSPLRLAYSAAAAHSRGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AGAMAPGALGSLSSRSAFSPLQPNASHFGADAGAYPLGAPLGLSPLRLAYSAAAAHSRGL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 AFMAPYSTAGLVPTLGFRPPMDYAFSDLMRDRSAAAAAAVHKEPTYGGGLYGPMVNGAPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AFMAPYSTAGLVPTLGFRPPMDYAFSDLMRDRSAAAAAAVHKEPTYGGGLYGPMVNGAPE
490 500 510 520 530 540
pF1KE3 KQ
::
XP_011 KQ
>>NP_115486 (OMIM: 614804) doublesex- and mab-3-related (542 aa)
initn: 3659 init1: 3659 opt: 3659 Z-score: 1864.7 bits: 354.8 E(85289): 4e-97
Smith-Waterman score: 3659; 100.0% identity (100.0% similar) in 542 aa overlap (1-542:1-542)
10 20 30 40 50 60
pF1KE3 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLLRGPPLLLRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLLRGPPLLLRA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 AEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAAQVALRRQQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 AEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAAQVALRRQQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 QEENEARELQLLYGTAEGLALAAANGIIPPRPAYEVFGSVCAADGGGPGAGAPAGTGGGA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 QEENEARELQLLYGTAEGLALAAANGIIPPRPAYEVFGSVCAADGGGPGAGAPAGTGGGA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 AGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPGTSSPEVRPGSGSE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 AGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPGTSSPEVRPGSGSE
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 NGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSESGSEADKEEGEAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 NGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSESGSEADKEEGEAA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 PAPGLGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 PAPGLGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAA
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 GLGPAAPPDKAAVGAAAAADDAWPSRVDAAAAAAAAAGGPGLPAPLQAGPAAPPHHRPLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 GLGPAAPPDKAAVGAAAAADDAWPSRVDAAAAAAAAAGGPGLPAPLQAGPAAPPHHRPLL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 AGAMAPGALGSLSSRSAFSPLQPNASHFGADAGAYPLGAPLGLSPLRLAYSAAAAHSRGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 AGAMAPGALGSLSSRSAFSPLQPNASHFGADAGAYPLGAPLGLSPLRLAYSAAAAHSRGL
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 AFMAPYSTAGLVPTLGFRPPMDYAFSDLMRDRSAAAAAAVHKEPTYGGGLYGPMVNGAPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_115 AFMAPYSTAGLVPTLGFRPPMDYAFSDLMRDRSAAAAAAVHKEPTYGGGLYGPMVNGAPE
490 500 510 520 530 540
pF1KE3 KQ
::
NP_115 KQ
>>NP_071443 (OMIM: 614803) doublesex- and mab-3-related (504 aa)
initn: 956 init1: 462 opt: 513 Z-score: 281.4 bits: 61.7 E(85289): 6.2e-09
Smith-Waterman score: 960; 40.8% identity (59.8% similar) in 520 aa overlap (8-513:28-482)
10 20 30
pF1KE3 MELRSELPSVPGAATAAAATATGPPV----ASVASVAAAA
: :. : . . ::. :. ::::
NP_071 MERSQCGSRDRGVSGRPHLAPGLVVAAPPPPSPALPVPSGMQVPPAFLRPPSLFLRAAAA
10 20 30 40 50 60
40 50 60 70 80 90
pF1KE3 AAAASLPVSVAGGLLRGPPL---LLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKD
::::. .: .:: .: : . .. ::::::::::::::::::::::::.:::.:
NP_071 AAAAAAATSGSGGCPPAPGLESGVGAVGCGYPRTPKCARCRNHGVVSALKGHKRFCRWRD
70 80 90 100 110 120
100 110 120 130 140 150
pF1KE3 CLCAKCTLIAERQRVMAAQVALRRQQAQEENEARELQLLYGTAEGLALAAANGIIPPRPA
: ::::::::::::::::::::::::::::.::: :: : . ::. ::
NP_071 CACAKCTLIAERQRVMAAQVALRRQQAQEESEARGLQRLLCS--GLSW-------PP---
130 140 150 160
160 170 180 190 200 210
pF1KE3 YEVFGSVCAADGGGPGAGAPAGTGGGAAGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPP
:. :.::: : : .::: ::::. . . :.. . ... . :
NP_071 ----GG--RASGGGGRAENPQSTGGPAAGAALGLGALRQASGSATPAFEVFQQDYPEEKQ
170 180 190 200 210 220
220 230 240 250 260
pF1KE3 VKPLSP-DGADSGPG---TSSPEVRPGSGSE-NGD-GESFSGSPLARASKEAGGSCPGSA
. : .. ..: ..: .. ::.:. :: :.. :: ... :.. .
NP_071 EQKESKCESCQNGQEELISKSHQLYLGSSSRSNGVIGKQSIGSSISEYSNKPDSILSPHP
230 240 250 260 270 280
270 280 290 300 310 320
pF1KE3 GPGGGGEEDSPGSASPLGSESGSEADKEEGEAAPAPGLGGGSGPRQRTPLDILTRVFPGH
: .:::: :: : : :::.:.. . .: .: :. : : ::::::..::..
NP_071 GEQSGGEE-SPRSLSSSDLESGNESEWVKDLTATKASLPTVSS-RPRDPLDILTKIFPNY
290 300 310 320 330 340
330 340 350 360 370 380
pF1KE3 RRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAAGLGPAAPPDKAAVGAAAAADDAWPSRV
::. :: .:. : :::::::::::: : ::. .. . ... .:
NP_071 RRSRLEGILRFCKGDVVQAIEQVLN----------GKEHKPDNRNLANSEELENTAFQR-
350 360 370 380
390 400 410 420 430 440
pF1KE3 DAAAAAAAAAGGPGLPAPLQAGPAAPPHHRPLLAGAMAPGALGSLSSRSAFSPLQPNASH
:.. . .: :. :.:...::::::: ...
NP_071 ----ASSFSLAGIGF---------------------------GTLGNKSAFSPLQTTSAS
390 400 410
450 460 470 480 490 500
pF1KE3 FGADAGAYPLGAPLGLSPLRLAYSAAAAHSRGLA-FMAPYSTAGLVPTLGFRPPMDYAFS
.:.:.. : .. .:.::::::::.:. :::. ::.:: : :::::: ::: .:::::
NP_071 YGGDSSLYGVNPRVGISPLRLAYSSAG---RGLSGFMSPYLTPGLVPTLPFRPALDYAFS
420 430 440 450 460 470
510 520 530 540
pF1KE3 DLMRDRSAAAAAAVHKEPTYGGGLYGPMVNGAPEKQ
..:: :
NP_071 GMIRDSSYLSSKDSITCGRLYFRPNQDNP
480 490 500
>>XP_016869864 (OMIM: 602424) PREDICTED: doublesex- and (215 aa)
initn: 424 init1: 393 opt: 446 Z-score: 252.3 bits: 55.1 E(85289): 2.6e-07
Smith-Waterman score: 446; 43.2% identity (61.0% similar) in 213 aa overlap (5-214:14-212)
10 20 30 40 50
pF1KE3 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLL
:: : .::. . : . : :: : :.::....:. : .::
XP_016 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGK--ASGALVGAASGSSAG-GSSRGGGSG
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 RGPPLLLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAA
: : ...: :: :::::::::: .: ::::::.: :.:: : ::.:::::::::::
XP_016 SGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 QVALRRQQAQEENEARELQL-LYGTAEGLALAAANGIIPPRPAYEVFGSVCAADGGGPGA
::::::::::::. . . : ..:: :. :: : . . :.. . : :
XP_016 QVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNP------CLMTECSGTSQPPPA
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 GAP--AGTGGGAAGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPGT
..: :.. . .: .: :.: .:: :: : ::
XP_016 SVPTTAASDEEHGEPPCNELPVQDAFLLPASLL----PG-PERAPVLHF
180 190 200 210
230 240 250 260 270 280
pF1KE3 SSPEVRPGSGSENGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSES
>>NP_068770 (OMIM: 602424) doublesex- and mab-3-related (373 aa)
initn: 436 init1: 393 opt: 436 Z-score: 244.2 bits: 54.4 E(85289): 7.3e-07
Smith-Waterman score: 439; 36.0% identity (57.5% similar) in 275 aa overlap (5-275:14-272)
10 20 30 40 50
pF1KE3 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLL
:: : .::. . : . : :: : :.::....:. : .::
NP_068 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGK--ASGALVGAASGSSAG-GSSRGGGSG
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 RGPPLLLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAA
: : ...: :: :::::::::: .: ::::::.: :.:: : ::.:::::::::::
NP_068 SGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 QVALRRQQAQEENEARELQL-LYGTAEGLALAAANGIIPPRPAYEVFGSVCAADGGGPGA
::::::::::::. . . : ..:: :. :: : . . :.. . : :
NP_068 QVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNP------CLMTECSGTSQPPPA
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 GAP---AGTGGGAAGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPG
..: :. : . . .. . . : . .. .: : . : . . :
NP_068 SVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNC-PQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE3 TSSPEVRPGSGSENGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSE
: . ....: :. ..:::. :.. . :: :: :..
NP_068 YSMALAADSASGEVGN--PLGGSPV----KNSLRGLPGPYVPGQTGNQWQMKNMENRHAM
240 250 260 270 280
290 300 310 320 330 340
pF1KE3 SGSEADKEEGEAAPAPGLGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAI
NP_068 SSQYRMHSYYPPPSYLGQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPIS
290 300 310 320 330 340
>>XP_006716795 (OMIM: 602424) PREDICTED: doublesex- and (374 aa)
initn: 436 init1: 393 opt: 436 Z-score: 244.2 bits: 54.4 E(85289): 7.3e-07
Smith-Waterman score: 439; 36.0% identity (57.5% similar) in 275 aa overlap (5-275:14-272)
10 20 30 40 50
pF1KE3 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLL
:: : .::. . : . : :: : :.::....:. : .::
XP_006 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGK--ASGALVGAASGSSAG-GSSRGGGSG
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 RGPPLLLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAA
: : ...: :: :::::::::: .: ::::::.: :.:: : ::.:::::::::::
XP_006 SGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 QVALRRQQAQEENEARELQL-LYGTAEGLALAAANGIIPPRPAYEVFGSVCAADGGGPGA
::::::::::::. . . : ..:: :. :: : . . :.. . : :
XP_006 QVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNP------CLMTECSGTSQPPPA
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 GAP---AGTGGGAAGAGGSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPG
..: :. : . . .. . . : . .. .: : . : . . :
XP_006 SVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNC-PQ
180 190 200 210 220 230
230 240 250 260 270 280
pF1KE3 TSSPEVRPGSGSENGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSE
: . ....: :. ..:::. :.. . :: :: :..
XP_006 YSMALAADSASGEVGN--PLGGSPV----KNSLRGLPGPYVPGQTGNQWQQMKNMENRHA
240 250 260 270 280
290 300 310 320 330 340
pF1KE3 SGSEADKEEGEAAPAPGLGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAI
XP_006 MSSQYRMHSYYPPPSYLGQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPI
290 300 310 320 330 340
>>NP_006548 (OMIM: 604935) doublesex- and mab-3-related (226 aa)
initn: 366 init1: 366 opt: 374 Z-score: 215.8 bits: 48.4 E(85289): 2.8e-05
Smith-Waterman score: 398; 53.4% identity (68.6% similar) in 118 aa overlap (8-125:72-178)
10 20 30
pF1KE3 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAA
:..:: .. ::.: :: :...
NP_006 ADGDCEDDEDDDGVDEDAEEEGDGEEAGASPGMPGQPEQRGGPQPRPPLAPQASPAGTGP
50 60 70 80 90 100
40 50 60 70 80 90
pF1KE3 AAASLPVSVAGGLLRGPPLLLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCA
: ::: . : .: ::::::::::::::: ::::::.:::.:: ::
NP_006 RERCTP---AGG--GAEP------RKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCA
110 120 130 140 150
100 110 120 130 140 150
pF1KE3 KCTLIAERQRVMAAQVALRRQQAQEENEARELQLLYGTAEGLALAAANGIIPPRPAYEVF
.: :..::::::::::::::::: :...
NP_006 NCLLVVERQRVMAAQVALRRQQATEDKKGLSGKQNNFERKAVYQRQVRAPSLLAKSILEV
160 170 180 190 200 210
>>NP_001124337 (OMIM: 604935) doublesex- and mab-3-relat (226 aa)
initn: 366 init1: 366 opt: 374 Z-score: 215.8 bits: 48.4 E(85289): 2.8e-05
Smith-Waterman score: 398; 53.4% identity (68.6% similar) in 118 aa overlap (8-125:72-178)
10 20 30
pF1KE3 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAA
:..:: .. ::.: :: :...
NP_001 ADGDCEDDEDDDGVDEDAEEEGDGEEAGASPGMPGQPEQRGGPQPRPPLAPQASPAGTGP
50 60 70 80 90 100
40 50 60 70 80 90
pF1KE3 AAASLPVSVAGGLLRGPPLLLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCA
: ::: . : .: ::::::::::::::: ::::::.:::.:: ::
NP_001 RERCTP---AGG--GAEP------RKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCA
110 120 130 140 150
100 110 120 130 140 150
pF1KE3 KCTLIAERQRVMAAQVALRRQQAQEENEARELQLLYGTAEGLALAAANGIIPPRPAYEVF
.: :..::::::::::::::::: :...
NP_001 NCLLVVERQRVMAAQVALRRQQATEDKKGLSGKQNNFERKAVYQRQVRAPSLLAKSILEV
160 170 180 190 200 210
>>XP_016869705 (OMIM: 604935) PREDICTED: doublesex- and (226 aa)
initn: 366 init1: 366 opt: 374 Z-score: 215.8 bits: 48.4 E(85289): 2.8e-05
Smith-Waterman score: 398; 53.4% identity (68.6% similar) in 118 aa overlap (8-125:72-178)
10 20 30
pF1KE3 MELRSELPSVPGAATAAAATATGPPVASVASVAAAAA
:..:: .. ::.: :: :...
XP_016 ADGDCEDDEDDDGVDEDAEEEGDGEEAGASPGMPGQPEQRGGPQPRPPLAPQASPAGTGP
50 60 70 80 90 100
40 50 60 70 80 90
pF1KE3 AAASLPVSVAGGLLRGPPLLLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCLCA
: ::: . : .: ::::::::::::::: ::::::.:::.:: ::
XP_016 RERCTP---AGG--GAEP------RKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCA
110 120 130 140 150
100 110 120 130 140 150
pF1KE3 KCTLIAERQRVMAAQVALRRQQAQEENEARELQLLYGTAEGLALAAANGIIPPRPAYEVF
.: :..::::::::::::::::: :...
XP_016 NCLLVVERQRVMAAQVALRRQQATEDKKGLSGKQNNFERKAVYQRQVRAPSLLAKSILEV
160 170 180 190 200 210
>>NP_067063 (OMIM: 614754) doublesex- and mab-3-related (472 aa)
initn: 597 init1: 354 opt: 379 Z-score: 214.3 bits: 49.2 E(85289): 3.4e-05
Smith-Waterman score: 555; 34.2% identity (54.0% similar) in 424 aa overlap (43-444:7-387)
20 30 40 50 60 70
pF1KE3 AATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLLRGPPLLLRAAEKYPRTPKCAR
: :: . :: :: . :::::::
NP_067 MNGYGSPYLYMGGPVSQPP---RAPLQ--RTPKCAR
10 20 30
80 90 100 110 120 130
pF1KE3 CRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAAQVALRRQQAQEENEARELQLL
::::::.: :::::::::.::: : :: :: :::::::::::::::::.: :. :.
NP_067 CRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQVALRRQQANESLES----LI
40 50 60 70 80
140 150 160 170 180
pF1KE3 YGTAEGLALAAANGIIPPRPAYEVFGSVCAADGGGPGAGAPAGTGGGAAG--------AG
. : : : :: : . :.. . : ::. ..::. :
NP_067 PDS-----LRALPGPPPPGDAVAAPQPPPASQPSQPQPPRPAAELAAAAALRWTAEPQPG
90 100 110 120 130 140
190 200 210 220 230 240
pF1KE3 GSEAKLQKFDLFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPGTSSPEVRPGSGSENGDG
. .:.: : :: . : : : : .: .:. :::.: ..: . .
NP_067 ALQAQLAKPDLTEERL---GDGKSADNTEV--FSDKDTDQ---RSSPDVAKSKGCFTPE-
150 160 170 180 190
250 260 270 280 290 300
pF1KE3 ESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSESGSEADKEEGEAAPAPG
:: .: : :: .. .::. :. : : . . .. . : .. .
NP_067 -----SPEI-VSVEEGGY---AVQKNGGNPESRPDSPKCHAEQNHLLIEGPSGTVSLPFS
200 210 220 230 240
310 320 330 340 350 360
pF1KE3 LGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAAGLGP
: .. : ::..: ..::... ::::.:.:::::.:.:.: :: :......
NP_067 LKAN-----RPPLEVLKKIFPNQKPTVLELILKGCGGDLVSAVE-VLLSSRSSVTGAERT
250 260 270 280 290
370 380 390 400 410
pF1KE3 AAPPDKAAVGAAAAADD----AWPSRVDAAAAAAA----------AAGGPGLPAPLQAGP
.: :.. :. . . . ..: . ....: : .. .:.:: :::
NP_067 SAEPESLALPSNGHIFEHTLSSYPISSSKWSVGSAFRVPDTLRFSADSSNVVPSPL-AGP
300 310 320 330 340 350
420 430 440 450 460 470
pF1KE3 AAPPHHRPLLAGAMAPGALGSLSSRSAFSPLQPNASHFGADAGAYPLGAPLGLSPLRLAY
:: .: : : . .:: ::. ::
NP_067 LQPPFPQP----PRYPLMLRNTLARSQSSPFLPNDVTLWNTMTLQQQYQLRSQYVSPFPS
360 370 380 390 400 410
480 490 500 510 520 530
pF1KE3 SAAAAHSRGLAFMAPYSTAGLVPTLGFRPPMDYAFSDLMRDRSAAAAAAVHKEPTYGGGL
NP_067 NSTSVFRSSPVLPARATEDPRISIPDDGCPFVSKQSIYTEDDYDERSDSSDSRTLNTSS
420 430 440 450 460 470
542 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 04:33:12 2016 done: Tue Nov 8 04:33:13 2016
Total Scan time: 13.160 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]