Result of FASTA (omim) for
pFN21AE3412
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3412, 333 aa
1>>>pF1KE3412 333 - 333 aa - 333 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.5392+/-0.000546; mu= 1.4389+/- 0.033
mean_var=462.2935+/-110.848, 0's: 0 Z-trim(117.0): 1077 B-trim: 1523 in 1/51
Lambda= 0.059651
statistics sampled from 27133 (28553) to 27133 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.701), E-opt: 0.2 (0.335), width: 16
Scan time: 8.400
The best scores are: opt bits E(85289)
NP_665699 (OMIM: 609600) zinc finger protein 396 i ( 333) 2258 209.1 1.1e-53
NP_001309219 (OMIM: 609600) zinc finger protein 39 ( 335) 2058 191.9 1.6e-48
XP_006722495 (OMIM: 609600) PREDICTED: zinc finger ( 335) 2058 191.9 1.6e-48
NP_001309215 (OMIM: 609600) zinc finger protein 39 ( 335) 2058 191.9 1.6e-48
XP_016881176 (OMIM: 609600) PREDICTED: zinc finger ( 335) 2058 191.9 1.6e-48
XP_016881177 (OMIM: 609600) PREDICTED: zinc finger ( 335) 2058 191.9 1.6e-48
XP_016881178 (OMIM: 609600) PREDICTED: zinc finger ( 266) 1588 151.3 2.2e-36
NP_001309220 (OMIM: 609600) zinc finger protein 39 ( 210) 1272 123.9 3e-28
XP_005258398 (OMIM: 194534) PREDICTED: zinc finger ( 368) 1066 106.6 8.6e-23
NP_008896 (OMIM: 194534) zinc finger protein 24 is ( 368) 1066 106.6 8.6e-23
XP_011513114 (OMIM: 610794) PREDICTED: zinc finger ( 406) 820 85.5 2.1e-16
XP_011513113 (OMIM: 610794) PREDICTED: zinc finger ( 406) 820 85.5 2.1e-16
NP_001128688 (OMIM: 610794) zinc finger and SCAN d ( 406) 820 85.5 2.1e-16
NP_112161 (OMIM: 610794) zinc finger and SCAN doma ( 406) 820 85.5 2.1e-16
XP_011513111 (OMIM: 610794) PREDICTED: zinc finger ( 406) 820 85.5 2.1e-16
XP_011513109 (OMIM: 610794) PREDICTED: zinc finger ( 406) 820 85.5 2.1e-16
NP_001128687 (OMIM: 610794) zinc finger and SCAN d ( 406) 820 85.5 2.1e-16
XP_016866685 (OMIM: 610794) PREDICTED: zinc finger ( 406) 820 85.5 2.1e-16
NP_665916 (OMIM: 610794) zinc finger and SCAN doma ( 406) 820 85.5 2.1e-16
XP_005249353 (OMIM: 610794) PREDICTED: zinc finger ( 406) 820 85.5 2.1e-16
XP_005249352 (OMIM: 610794) PREDICTED: zinc finger ( 406) 820 85.5 2.1e-16
NP_001230170 (OMIM: 610794) zinc finger and SCAN d ( 406) 820 85.5 2.1e-16
XP_011513115 (OMIM: 610794) PREDICTED: zinc finger ( 406) 820 85.5 2.1e-16
XP_011513110 (OMIM: 610794) PREDICTED: zinc finger ( 406) 820 85.5 2.1e-16
NP_001186409 (OMIM: 602246) zinc finger and SCAN d ( 394) 809 84.5 4e-16
NP_006290 (OMIM: 602246) zinc finger and SCAN doma ( 394) 809 84.5 4e-16
XP_016866756 (OMIM: 602246) PREDICTED: zinc finger ( 394) 809 84.5 4e-16
XP_011513180 (OMIM: 602246) PREDICTED: zinc finger ( 526) 809 84.7 4.7e-16
XP_011513319 (OMIM: 603978) PREDICTED: zinc finger ( 565) 761 80.6 8.5e-15
XP_011513316 (OMIM: 603978) PREDICTED: zinc finger ( 611) 761 80.7 8.8e-15
XP_011513317 (OMIM: 603978) PREDICTED: zinc finger ( 611) 761 80.7 8.8e-15
NP_001156863 (OMIM: 603978) zinc finger and SCAN d ( 611) 761 80.7 8.8e-15
XP_016867017 (OMIM: 603978) PREDICTED: zinc finger ( 611) 761 80.7 8.8e-15
NP_001295052 (OMIM: 194534) zinc finger protein 24 ( 193) 673 72.3 9.4e-13
XP_016881531 (OMIM: 609601) PREDICTED: zinc finger ( 534) 651 71.1 5.8e-12
NP_001128650 (OMIM: 609601) zinc finger protein 39 ( 534) 651 71.1 5.8e-12
XP_011524533 (OMIM: 609601) PREDICTED: zinc finger ( 534) 651 71.1 5.8e-12
NP_001307882 (OMIM: 616463) zinc finger protein 23 ( 417) 607 67.2 7.1e-11
NP_001307883 (OMIM: 616463) zinc finger protein 23 ( 417) 607 67.2 7.1e-11
NP_055334 (OMIM: 616463) zinc finger protein 232 i ( 444) 607 67.2 7.3e-11
XP_016880510 (OMIM: 616463) PREDICTED: zinc finger ( 444) 607 67.2 7.3e-11
XP_006716176 (OMIM: 601261) PREDICTED: zinc finger ( 473) 600 66.7 1.2e-10
XP_005250625 (OMIM: 601261) PREDICTED: zinc finger ( 473) 600 66.7 1.2e-10
NP_666019 (OMIM: 601261) zinc finger and SCAN doma ( 473) 600 66.7 1.2e-10
XP_016868073 (OMIM: 601261) PREDICTED: zinc finger ( 473) 600 66.7 1.2e-10
XP_011522308 (OMIM: 616463) PREDICTED: zinc finger ( 396) 595 66.1 1.4e-10
NP_001307884 (OMIM: 616463) zinc finger protein 23 ( 416) 585 65.3 2.6e-10
XP_016880511 (OMIM: 616463) PREDICTED: zinc finger ( 368) 573 64.2 5.1e-10
XP_011524531 (OMIM: 609601) PREDICTED: zinc finger ( 553) 551 62.6 2.3e-09
XP_011524532 (OMIM: 609601) PREDICTED: zinc finger ( 553) 551 62.6 2.3e-09
>>NP_665699 (OMIM: 609600) zinc finger protein 396 isofo (333 aa)
initn: 2258 init1: 2258 opt: 2258 Z-score: 1085.0 bits: 209.1 E(85289): 1.1e-53
Smith-Waterman score: 2258; 100.0% identity (100.0% similar) in 333 aa overlap (1-333:1-333)
10 20 30 40 50 60
pF1KE3 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_665 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
250 260 270 280 290 300
310 320 330
pF1KE3 HTDSKYEHAIAEAQKNMYFKTRLKCPRSLSGGR
:::::::::::::::::::::::::::::::::
NP_665 HTDSKYEHAIAEAQKNMYFKTRLKCPRSLSGGR
310 320 330
>>NP_001309219 (OMIM: 609600) zinc finger protein 396 is (335 aa)
initn: 2375 init1: 2053 opt: 2058 Z-score: 991.9 bits: 191.9 E(85289): 1.6e-48
Smith-Waterman score: 2058; 93.7% identity (95.8% similar) in 331 aa overlap (1-327:1-331)
10 20 30 40 50 60
pF1KE3 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
250 260 270 280 290 300
310 320 330
pF1KE3 HTDSK-YE-HAIAEA--QKNMYFKTRLKCPRSLSGGR
:: : :. : ..: :.. :. : . :
NP_001 HTGEKPYKCHDCGKAFSQSSNLFRHRKRHIRKKVP
310 320 330
>>XP_006722495 (OMIM: 609600) PREDICTED: zinc finger pro (335 aa)
initn: 2375 init1: 2053 opt: 2058 Z-score: 991.9 bits: 191.9 E(85289): 1.6e-48
Smith-Waterman score: 2058; 93.7% identity (95.8% similar) in 331 aa overlap (1-327:1-331)
10 20 30 40 50 60
pF1KE3 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
250 260 270 280 290 300
310 320 330
pF1KE3 HTDSK-YE-HAIAEA--QKNMYFKTRLKCPRSLSGGR
:: : :. : ..: :.. :. : . :
XP_006 HTGEKPYKCHDCGKAFSQSSNLFRHRKRHIRKKVP
310 320 330
>>NP_001309215 (OMIM: 609600) zinc finger protein 396 is (335 aa)
initn: 2375 init1: 2053 opt: 2058 Z-score: 991.9 bits: 191.9 E(85289): 1.6e-48
Smith-Waterman score: 2058; 93.7% identity (95.8% similar) in 331 aa overlap (1-327:1-331)
10 20 30 40 50 60
pF1KE3 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
250 260 270 280 290 300
310 320 330
pF1KE3 HTDSK-YE-HAIAEA--QKNMYFKTRLKCPRSLSGGR
:: : :. : ..: :.. :. : . :
NP_001 HTGEKPYKCHDCGKAFSQSSNLFRHRKRHIRKKVP
310 320 330
>>XP_016881176 (OMIM: 609600) PREDICTED: zinc finger pro (335 aa)
initn: 2375 init1: 2053 opt: 2058 Z-score: 991.9 bits: 191.9 E(85289): 1.6e-48
Smith-Waterman score: 2058; 93.7% identity (95.8% similar) in 331 aa overlap (1-327:1-331)
10 20 30 40 50 60
pF1KE3 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
250 260 270 280 290 300
310 320 330
pF1KE3 HTDSK-YE-HAIAEA--QKNMYFKTRLKCPRSLSGGR
:: : :. : ..: :.. :. : . :
XP_016 HTGEKPYKCHDCGKAFSQSSNLFRHRKRHIRKKVP
310 320 330
>>XP_016881177 (OMIM: 609600) PREDICTED: zinc finger pro (335 aa)
initn: 2375 init1: 2053 opt: 2058 Z-score: 991.9 bits: 191.9 E(85289): 1.6e-48
Smith-Waterman score: 2058; 93.7% identity (95.8% similar) in 331 aa overlap (1-327:1-331)
10 20 30 40 50 60
pF1KE3 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
250 260 270 280 290 300
310 320 330
pF1KE3 HTDSK-YE-HAIAEA--QKNMYFKTRLKCPRSLSGGR
:: : :. : ..: :.. :. : . :
XP_016 HTGEKPYKCHDCGKAFSQSSNLFRHRKRHIRKKVP
310 320 330
>>XP_016881178 (OMIM: 609600) PREDICTED: zinc finger pro (266 aa)
initn: 1770 init1: 1575 opt: 1588 Z-score: 774.3 bits: 151.3 E(85289): 2.2e-36
Smith-Waterman score: 1640; 79.9% identity (79.9% similar) in 333 aa overlap (1-333:1-266)
10 20 30 40 50 60
pF1KE3 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
:::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQD-----
190 200 210 220 230
250 260 270 280 290 300
pF1KE3 RQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAILIQHRRT
XP_016 ------------------------------------------------------------
310 320 330
pF1KE3 HTDSKYEHAIAEAQKNMYFKTRLKCPRSLSGGR
:::::::::::::::::::::::::::::::
XP_016 --DSKYEHAIAEAQKNMYFKTRLKCPRSLSGGR
240 250 260
>>NP_001309220 (OMIM: 609600) zinc finger protein 396 is (210 aa)
initn: 1272 init1: 1272 opt: 1272 Z-score: 628.2 bits: 123.9 E(85289): 3e-28
Smith-Waterman score: 1272; 99.5% identity (99.5% similar) in 189 aa overlap (1-189:1-189)
10 20 30 40 50 60
pF1KE3 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSAKLGKSSSLLTQTSEECNGILTEKMEEEEQTCDPDSSLHWSSSYSPETFRQQFRQFGY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKHHPENG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EETVTMLEDVERELDGPKQIFFGRRKDMIAEKLAPSEITEELPSSQLMPVKKQLQGASWE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYEQDGRFEK
::::::: :
NP_001 LQSLRPHGEGAGFSSCWKVWGPSAHHTHLS
190 200 210
>>XP_005258398 (OMIM: 194534) PREDICTED: zinc finger pro (368 aa)
initn: 1445 init1: 788 opt: 1066 Z-score: 530.2 bits: 106.6 E(85289): 8.6e-23
Smith-Waterman score: 1066; 56.7% identity (76.6% similar) in 312 aa overlap (1-305:1-305)
10 20 30 40 50
pF1KE3 MSAK-LGKSSSLLTQTSEECNGILTEKMEEEEQTCDPD----SSLHWSSSYSPETFRQQF
:::. . ..: :. : .: . :: :.:: ::: ::. :. .:: :::.:
XP_005 MSAQSVEEDSILIIPTPDEEEKILRVKLEE-----DPDGEEGSSIPWNHLPDPEIFRQRF
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 RQFGYQDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKH
:::::::::::.::.:.: :::.::::::.:::::::::.:::::.::::::::.::. :
XP_005 RQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 HPENGEETVTMLEDVERELDGPKQ-IFFGRRK-DMIAEKLAPSEITEELPSSQLMPVKKQ
:::::::.::.:::.: ::: : : . . ::: ....: .. .: .. ::::.: :..:
XP_005 HPENGEEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 LQGASWELQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYE
:. :::::.::: :.: .: : : .:. ..: : .: . :.:. : : :
XP_005 LKWASWELHSLRHCDDDGRTENGALAPKQELPSALESH-EVPGTLNMGVPQIFKYGETCF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 QDGRFEKRQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAI
::::... ::: :::. :::::: :::.::::::::::::.:::.: ::.::::::.:
XP_005 PKGRFERKR-NPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSI
240 250 260 270 280 290
300 310 320 330
pF1KE3 LIQHRRTHTDSKYEHAIAEAQKNMYFKTRLKCPRSLSGGR
:.::.:.:: :
XP_005 LVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRH
300 310 320 330 340 350
>>NP_008896 (OMIM: 194534) zinc finger protein 24 isofor (368 aa)
initn: 1445 init1: 788 opt: 1066 Z-score: 530.2 bits: 106.6 E(85289): 8.6e-23
Smith-Waterman score: 1066; 56.7% identity (76.6% similar) in 312 aa overlap (1-305:1-305)
10 20 30 40 50
pF1KE3 MSAK-LGKSSSLLTQTSEECNGILTEKMEEEEQTCDPD----SSLHWSSSYSPETFRQQF
:::. . ..: :. : .: . :: :.:: ::: ::. :. .:: :::.:
NP_008 MSAQSVEEDSILIIPTPDEEEKILRVKLEE-----DPDGEEGSSIPWNHLPDPEIFRQRF
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 RQFGYQDSPGPHEALSRLWELCHLWLRPEVHTKEQILELLVLEQFLAILPKELQAWVQKH
:::::::::::.::.:.: :::.::::::.:::::::::.:::::.::::::::.::. :
NP_008 RQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVRDH
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 HPENGEETVTMLEDVERELDGPKQ-IFFGRRK-DMIAEKLAPSEITEELPSSQLMPVKKQ
:::::::.::.:::.: ::: : : . . ::: ....: .. .: .. ::::.: :..:
NP_008 HPENGEEAVTVLEDLESELDDPGQPVSLRRRKREVLVEDMVSQEEAQGLPSSELDAVENQ
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 LQGASWELQSLRPHDEDIKTTNVKSASRQKTSLGIELHCNVSNILHMNGSQSSTYRGTYE
:. :::::.::: :.: .: : : .:. ..: : .: . :.:. : : :
NP_008 LKWASWELHSLRHCDDDGRTENGALAPKQELPSALESH-EVPGTLNMGVPQIFKYGETCF
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 QDGRFEKRQGNPSWKKQQKCDECGKIFSQSSALILHQRIHSGKKPYACDECAKAFSRSAI
::::... ::: :::. :::::: :::.::::::::::::.:::.: ::.::::::.:
NP_008 PKGRFERKR-NPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSI
240 250 260 270 280 290
300 310 320 330
pF1KE3 LIQHRRTHTDSKYEHAIAEAQKNMYFKTRLKCPRSLSGGR
:.::.:.:: :
NP_008 LVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRH
300 310 320 330 340 350
333 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 13:42:29 2016 done: Sun Nov 6 13:42:31 2016
Total Scan time: 8.400 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]