Result of FASTA (ccds) for
pFN21AE3402
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3402, 149 aa
1>>>pF1KE3402 149 - 149 aa - 149 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.5474+/-0.000988; mu= 6.0021+/- 0.058
mean_var=206.9624+/-55.759, 0's: 0 Z-trim(111.3): 69 B-trim: 1113 in 2/48
Lambda= 0.089151
statistics sampled from 12170 (12247) to 12170 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.376), width: 16
Scan time: 1.660
The best scores are: opt bits E(32554)
CCDS32914.1 ZNF69 gene_id:7620|Hs108|chr19 ( 149) 1042 145.7 9.9e-36
CCDS42503.1 ZNF440 gene_id:126070|Hs108|chr19 ( 595) 838 120.3 1.8e-27
CCDS45982.1 ZNF763 gene_id:284390|Hs108|chr19 ( 397) 828 118.8 3.4e-27
CCDS32915.1 ZNF700 gene_id:90592|Hs108|chr19 ( 742) 806 116.3 3.5e-26
CCDS74289.1 ZNF700 gene_id:90592|Hs108|chr19 ( 745) 806 116.3 3.5e-26
CCDS12268.1 ZNF439 gene_id:90594|Hs108|chr19 ( 499) 754 109.4 2.8e-24
CCDS45985.1 ZNF844 gene_id:284391|Hs108|chr19 ( 666) 545 82.7 4.1e-16
CCDS45986.1 ZNF20 gene_id:7568|Hs108|chr19 ( 532) 538 81.7 6.8e-16
CCDS45983.1 ZNF433 gene_id:163059|Hs108|chr19 ( 673) 469 72.9 3.6e-13
CCDS45981.1 ZNF823 gene_id:55552|Hs108|chr19 ( 610) 450 70.4 1.9e-12
CCDS42502.1 ZNF627 gene_id:199692|Hs108|chr19 ( 461) 448 70.0 1.9e-12
CCDS42505.1 ZNF564 gene_id:163050|Hs108|chr19 ( 553) 426 67.3 1.5e-11
CCDS45984.2 ZNF878 gene_id:729747|Hs108|chr19 ( 531) 420 66.5 2.5e-11
CCDS32916.1 ZNF136 gene_id:7695|Hs108|chr19 ( 540) 409 65.1 6.7e-11
>>CCDS32914.1 ZNF69 gene_id:7620|Hs108|chr19 (149 aa)
initn: 1042 init1: 1042 opt: 1042 Z-score: 755.0 bits: 145.7 E(32554): 9.9e-36
Smith-Waterman score: 1042; 100.0% identity (100.0% similar) in 149 aa overlap (1-149:1-149)
10 20 30 40 50 60
pF1KE3 MPCCSHRRCREDPGTSESQEMEEWALLDISQRKLYKEVMLETFRNLTSVGKSWKDQNIEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 MPCCSHRRCREDPGTSESQEMEEWALLDISQRKLYKEVMLETFRNLTSVGKSWKDQNIEY
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEKKASPEIKSCDSFVCGEV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS32 EYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEKKASPEIKSCDSFVCGEV
70 80 90 100 110 120
130 140
pF1KE3 GLGNSSFNMNIRGDIGHKAYEYQEYGPKP
:::::::::::::::::::::::::::::
CCDS32 GLGNSSFNMNIRGDIGHKAYEYQEYGPKP
130 140
>>CCDS42503.1 ZNF440 gene_id:126070|Hs108|chr19 (595 aa)
initn: 838 init1: 838 opt: 838 Z-score: 606.9 bits: 120.3 E(32554): 1.8e-27
Smith-Waterman score: 838; 93.8% identity (98.4% similar) in 128 aa overlap (22-149:16-143)
10 20 30 40 50 60
pF1KE3 MPCCSHRRCREDPGTSESQEMEEWALLDISQRKLYKEVMLETFRNLTSVGKSWKDQNIEY
::::::::::::::.::::::::::::.:: ::::::::
CCDS42 MDPVAFKDVAVNFTQEEWALLDISQRKLYREVMLETFRNLTSLGKRWKDQNIEY
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 EYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEKKASPEIKSCDSFVCGEV
:.::::::::::::.:::::::::::::::: ::::::::::::::::.:::.:::::::
CCDS42 EHQNPRRNFRSLIEEKVNEIKDDSHCGETFTPVPDDRLNFQEKKASPEVKSCESFVCGEV
60 70 80 90 100 110
130 140
pF1KE3 GLGNSSFNMNIRGDIGHKAYEYQEYGPKP
:::::::::::::::::::::::::::::
CCDS42 GLGNSSFNMNIRGDIGHKAYEYQEYGPKPCKCQQPKKAFRYRPSFRTQERDHTGEKPNAC
120 130 140 150 160 170
>>CCDS45982.1 ZNF763 gene_id:284390|Hs108|chr19 (397 aa)
initn: 823 init1: 823 opt: 828 Z-score: 601.8 bits: 118.8 E(32554): 3.4e-27
Smith-Waterman score: 828; 85.8% identity (95.0% similar) in 141 aa overlap (9-149:9-146)
10 20 30 40 50 60
pF1KE3 MPCCSHRRCREDPGTSESQEMEEWALLDISQRKLYKEVMLETFRNLTSVGKSWKDQNIEY
: :: ... .:: :::::::::::::.::::::::::::.::.::::::::
CCDS45 MMFQDPVAC-EDVAVNFTQE--EWALLDISQRKLYREVMLETFRNLTSIGKKWKDQNIEY
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 EYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEKKASPEIKSCDSFVCGEV
:::::::::::::: .:::::.:::::::::::::::::::::::::: ::::.::::::
CCDS45 EYQNPRRNFRSLIEGNVNEIKEDSHCGETFTQVPDDRLNFQEKKASPEAKSCDNFVCGEV
60 70 80 90 100 110
130 140
pF1KE3 GLGNSSFNMNIRGDIGHKAYEYQEYGPKP
:.:::::::::::::::::::::.:.:::
CCDS45 GIGNSSFNMNIRGDIGHKAYEYQDYAPKPYKCQQPKKAFRYHPSFRTQERNHTGEKPYAC
120 130 140 150 160 170
>>CCDS32915.1 ZNF700 gene_id:90592|Hs108|chr19 (742 aa)
initn: 953 init1: 802 opt: 806 Z-score: 583.6 bits: 116.3 E(32554): 3.5e-26
Smith-Waterman score: 915; 80.4% identity (90.2% similar) in 163 aa overlap (1-149:1-163)
10 20 30 40
pF1KE3 MPCCSHRRCREDPGTSESQEM--------------EEWALLDISQRKLYKEVMLETFRNL
::::::: ::::::::::.:: :::.::::::..:..::::::::::
CCDS32 MPCCSHRSCREDPGTSESREMDPVAFEDVAVNFTQEEWTLLDISQKNLFREVMLETFRNL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 TSVGKSWKDQNIEYEYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEKKAS
::.::.:.:::::::::::::.::::::.::::::.::::::::::::::::::::::::
CCDS32 TSIGKKWSDQNIEYEYQNPRRSFRSLIEEKVNEIKEDSHCGETFTQVPDDRLNFQEKKAS
70 80 90 100 110 120
110 120 130 140
pF1KE3 PEIKSCDSFVCGEVGLGNSSFNMNIRGDIGHKAYEYQEYGPKP
::.::::::::.:::.:::::::.:::: ::::::::::::::
CCDS32 PEVKSCDSFVCAEVGIGNSSFNMSIRGDTGHKAYEYQEYGPKPYKCQQPKNKKAFRYRPS
130 140 150 160 170 180
CCDS32 IRTQERDHTGEKPYACKVCGKTFIFHSSIRRHMVMHSGDGTYKCKFCGKAFHSFSLYLIH
190 200 210 220 230 240
>>CCDS74289.1 ZNF700 gene_id:90592|Hs108|chr19 (745 aa)
initn: 939 init1: 802 opt: 806 Z-score: 583.6 bits: 116.3 E(32554): 3.5e-26
Smith-Waterman score: 909; 78.9% identity (88.6% similar) in 166 aa overlap (1-149:1-166)
10 20 30 40
pF1KE3 MPCCSHRRCREDPGTSESQEM-----------------EEWALLDISQRKLYKEVMLETF
::::::: ::::::::::.:: :::.::::::..:..:::::::
CCDS74 MPCCSHRSCREDPGTSESREMMFQDPVAFEDVAVNFTQEEWTLLDISQKNLFREVMLETF
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 RNLTSVGKSWKDQNIEYEYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEK
:::::.::.:.:::::::::::::.::::::.::::::.:::::::::::::::::::::
CCDS74 RNLTSIGKKWSDQNIEYEYQNPRRSFRSLIEEKVNEIKEDSHCGETFTQVPDDRLNFQEK
70 80 90 100 110 120
110 120 130 140
pF1KE3 KASPEIKSCDSFVCGEVGLGNSSFNMNIRGDIGHKAYEYQEYGPKP
:::::.::::::::.:::.:::::::.:::: ::::::::::::::
CCDS74 KASPEVKSCDSFVCAEVGIGNSSFNMSIRGDTGHKAYEYQEYGPKPYKCQQPKNKKAFRY
130 140 150 160 170 180
CCDS74 RPSIRTQERDHTGEKPYACKVCGKTFIFHSSIRRHMVMHSGDGTYKCKFCGKAFHSFSLY
190 200 210 220 230 240
>>CCDS12268.1 ZNF439 gene_id:90594|Hs108|chr19 (499 aa)
initn: 752 init1: 588 opt: 754 Z-score: 549.3 bits: 109.4 E(32554): 2.8e-24
Smith-Waterman score: 754; 85.9% identity (93.8% similar) in 128 aa overlap (22-149:31-157)
10 20 30 40 50
pF1KE3 MPCCSHRRCREDPGTSESQEMEEWALLDISQRKLYKEVMLETFRNLTSVGK
::::::::::..::.::::::: ::::.::
CCDS12 MLSLSPILLYTCEMFQDPVAFKDVAVNFTQEEWALLDISQKNLYREVMLETFWNLTSIGK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 SWKDQNIEYEYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEKKASPEIKS
.:::::::::::::::::::. :.::::::.::::::::: :::::::::.::::::.::
CCDS12 KWKDQNIEYEYQNPRRNFRSVTEEKVNEIKEDSHCGETFTPVPDDRLNFQKKKASPEVKS
70 80 90 100 110 120
120 130 140
pF1KE3 CDSFVCGEVGLGNSSFNMNIRGDIGHKAYEYQEYGPKP
:::::: :::::::: ::::::: :::: : :::::::
CCDS12 CDSFVC-EVGLGNSSSNMNIRGDTGHKACECQEYGPKPWKSQQPKKAFRYHPSLRTQERD
130 140 150 160 170
CCDS12 HTGKKPYACKECGKNIIYHSSIQRHMVVHSGDGPYKCKFCGKAFHCLSLYLIHERTHTGE
180 190 200 210 220 230
>>CCDS45985.1 ZNF844 gene_id:284391|Hs108|chr19 (666 aa)
initn: 543 init1: 356 opt: 545 Z-score: 402.7 bits: 82.7 E(32554): 4.1e-16
Smith-Waterman score: 545; 57.6% identity (82.7% similar) in 139 aa overlap (11-149:7-140)
10 20 30 40 50 60
pF1KE3 MPCCSHRRCREDPGTSESQEMEEWALLDISQRKLYKEVMLETFRNLTSVGKSWKDQNIEY
:: ... .:: ::.::: ::..::.::: ::.:::.:.:..:::::::
CCDS45 MDLVAFEDVAVNFTQE--EWSLLDPSQKNLYREVMQETLRNLASIGEKWKDQNIED
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 EYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEKKASPEIKSCDSFVCGEV
.:.::: :.:::. ..:.: ...::::: .:.::: :: ::.:: .:::.: :::::
CCDS45 QYKNPRNNLRSLLGERVDENTEENHCGETSSQIPDDTLN---KKTSPGVKSCESSVCGEV
60 70 80 90 100 110
130 140
pF1KE3 GLGNSSFNMNIRGDIGHKAYEYQEYGPKP
.:.::.: .::.: .:: :::::: .:
CCDS45 FVGHSSLNRHIRADTAHKPSEYQEYGQEPYKCQQRKKAFRCHPSFQMQEKAHTGEKLYDC
120 130 140 150 160 170
>>CCDS45986.1 ZNF20 gene_id:7568|Hs108|chr19 (532 aa)
initn: 407 init1: 256 opt: 538 Z-score: 398.9 bits: 81.7 E(32554): 6.8e-16
Smith-Waterman score: 538; 59.7% identity (80.6% similar) in 139 aa overlap (11-149:10-142)
10 20 30 40 50 60
pF1KE3 MPCCSHRRCREDPGTSESQEMEEWALLDISQRKLYKEVMLETFRNLTSVGKSWKDQNIEY
:: ..: .:: :::::: ::..::..:: :::.:::::::.:: ::::
CCDS45 MMFQDSVAFEDVAVSFTQE--EWALLDPSQKNLYRDVMQETFKNLTSVGKTWKVQNIED
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 EYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEKKASPEIKSCDSFVCGEV
::.:::::. ::...:. : :.. ::::.:.:. :: :: .:. : : :.: :::::
CCDS45 EYKNPRRNL-SLMREKLCESKESHHCGESFNQIADDMLN---RKTLPGITPCESSVCGEV
60 70 80 90 100 110
130 140
pF1KE3 GLGNSSFNMNIRGDIGHKAYEYQEYGPKP
: :.::.: .::.: :::. :::::: .:
CCDS45 GTGHSSLNTHIRADTGHKSSEYQEYGENPYRNKECKKAFSYLDSFQSHDKACTKEKPYDG
120 130 140 150 160 170
>>CCDS45983.1 ZNF433 gene_id:163059|Hs108|chr19 (673 aa)
initn: 455 init1: 224 opt: 469 Z-score: 349.8 bits: 72.9 E(32554): 3.6e-13
Smith-Waterman score: 469; 55.4% identity (76.3% similar) in 139 aa overlap (11-149:10-141)
10 20 30 40 50 60
pF1KE3 MPCCSHRRCREDPGTSESQEMEEWALLDISQRKLYKEVMLETFRNLTSVGKSWKDQNIEY
:: ... .:: :::::: ::..: ..:: ::::::.:.::.:: :::
CCDS45 MMFQDSVAFEDVAVTFTQE--EWALLDPSQKNLCRDVMQETFRNLASIGKKWKPQNIYV
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 EYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEKKASPEIKSCDSFVCGEV
::.: :::.: .. ... : :. . :: .:::::: : ::.. .:::.: : :::
CCDS45 EYENLRRNLR-IVGERLFESKEGHQHGEILTQVPDDML----KKTTTGVKSCESSVYGEV
60 70 80 90 100 110
130 140
pF1KE3 GLGNSSFNMNIRGDIGHKAYEYQEYGPKP
: ..::.: .:: : ::::::::::: ::
CCDS45 GSAHSSLNRHIRDDTGHKAYEYQEYGQKPYKCKYCKKPFNCLSSVQTHERAHSGRKLYVC
120 130 140 150 160 170
>>CCDS45981.1 ZNF823 gene_id:55552|Hs108|chr19 (610 aa)
initn: 460 init1: 193 opt: 450 Z-score: 337.1 bits: 70.4 E(32554): 1.9e-12
Smith-Waterman score: 454; 53.2% identity (74.1% similar) in 139 aa overlap (11-149:7-135)
10 20 30 40 50 60
pF1KE3 MPCCSHRRCREDPGTSESQEMEEWALLDISQRKLYKEVMLETFRNLTSVGKSWKDQNIEY
:: ... .:: ::::: ::..::..:: ::.::: . .:.::::
CCDS45 MDSVAFEDVAVNFTQE--EWALLGPSQKSLYRNVMQETIRNLDCIEMKWEDQNIGD
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 EYQNPRRNFRSLIEKKVNEIKDDSHCGETFTQVPDDRLNFQEKKASPEIKSCDSFVCGEV
. :: .::.:: .. ::::::.::::: :.::. .: : .:... ::: ::::
CCDS45 QCQNAKRNLRS----HTCEIKDDSQCGETFGQIPDSIVN----KNTPRVNPCDSGECGEV
60 70 80 90 100
130 140
pF1KE3 GLGNSSFNMNIRGDIGHKAYEYQEYGPKP
::.::.: ::: : :::. :.:::: ::
CCDS45 VLGHSSLNCNIRVDTGHKSCEHQEYGEKPYTHKQRGKAISHQHSFQTHERPPTGKKPFDC
110 120 130 140 150 160
149 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:11:41 2016 done: Sun Nov 6 05:11:41 2016
Total Scan time: 1.660 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]