FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3307, 798 aa
  1>>>pF1KE3307 798 - 798 aa - 798 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.8586+/-0.000365; mu= 9.5482+/- 0.023
 mean_var=176.2090+/-36.498, 0's: 0 Z-trim(118.9): 36  B-trim: 363 in 1/58
 Lambda= 0.096618
 statistics sampled from 32373 (32409) to 32373 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.726), E-opt: 0.2 (0.38), width:  16
 Scan time: 14.330

The best scores are:                                      opt bits E(85289)
NP_114171 (OMIM: 609240) serine/threonine-protein  ( 798) 5397 765.2       0


>>NP_114171 (OMIM: 609240) serine/threonine-protein kina  (798 aa)
 initn: 5397 init1: 5397 opt: 5397  Z-score: 4076.5  bits: 765.2 E(85289):    0
Smith-Waterman score: 5397; 99.7% identity (99.9% similar) in 798 aa overlap (1-798:1-798)

               10        20        30        40        50        60
pF1KE3 MAASLPGPGSRLFRTYGAADGRRQRRPGREAAQWFPPQDRRRFFNSSGSSDASIGDPSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 MAASLPGPGSRLFRTYGAADGRRQRRPGREAAQWFPPQDRRRFFNSSGSSDASIGDPSQS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 DDPDDPDDPDFPGSPVRRRRRCPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRRLGLRA
       ::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::
NP_114 DDPDDPDDPDFPGSPVRRRRRRPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRRLGLRA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 RPPQKCSTPCGPLRLPPFPSRDSGRLSPDLSVCGQPRDGDELGISASLFSSLASPCPGSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 RPPQKCSTPCGPLRLPPFPSRDSGRLSPDLSVCGQPRDGDELGISASLFSSLASPCPGSP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 TPRDSVISIGTSACLVAASAVPSGLHLPEVSLDRASLPCSQEEATGGAKDTRMVHQTRAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 TPRDSVISIGTSACLVAASAVPSGLHLPEVSLDRASLPCSQEEATGGAKDTRMVHQTRAS
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 LRSVLFGLMNSGTPEDSEFRADGKNMRESCCKRKLVVGNGPEGPGLSSTGKRRATGQDSC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 LRSVLFGLMNSGTPEDSEFRADGKNMRESCCKRKLVVGNGPEGPGLSSTGKRRATGQDSC
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 QERGLQEAVRREHQEASVPKGRIVPRGIDRLERTRSSRKSKHQEATETSLLHSHRFKKGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 QERGLQEAVRREHQEASVPKGRIVPRGIDRLERTRSSRKSKHQEATETSLLHSHRFKKGQ
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE3 KLGKDSFPTQDLTPLQNACFWTKTRASFSFHKKKIVTDVSEVCSIYTTATSLSGSLLSEC
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::
NP_114 KLGKDSFPTQDLTPLQNVCFWTKTRASFSFHKKKIVTDVSEVCSIYTTATSLSGSLLSEC
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE3 SNRPVMNRTSGAPSSWHSSSMYLLSPLNTLSISNKKASDAEKVYGECSQKGPVPFSHCLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SNRPVMNRTSGAPSSWHSSSMYLLSPLNTLSISNKKASDAEKVYGECSQKGPVPFSHCLP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE3 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KE3 ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 ELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLF
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KE3 IVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 IVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKT
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KE3 SLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 SLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFTGDGDYQFD
              670       680       690       700       710       720

              730       740       750       760       770       780
pF1KE3 IYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 IYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT
              730       740       750       760       770       780

              790        
pF1KE3 MLNFSSATDLLCQHSLFK
       ::::::::::::::::::
NP_114 MLNFSSATDLLCQHSLFK
              790        




798 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 16:41:38 2016 done: Mon Nov  7 16:41:40 2016
 Total Scan time: 14.330 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]