Result of FASTA (omim) for
pFN21AE3286
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3286, 733 aa
1>>>pF1KE3286 733 - 733 aa - 733 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 8.3481+/-0.000477; mu= 7.4439+/- 0.030
mean_var=198.0635+/-41.250, 0's: 0 Z-trim(116.0): 46 B-trim: 439 in 1/51
Lambda= 0.091132
statistics sampled from 26850 (26896) to 26850 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.315), width: 16
Scan time: 10.860
The best scores are: opt bits E(85289)
NP_112196 (OMIM: 611673) TRMT1-like protein isofor ( 733) 4885 655.6 2.1e-187
XP_011508330 (OMIM: 611673) PREDICTED: TRMT1-like ( 577) 3849 519.3 1.7e-146
NP_001189352 (OMIM: 611673) TRMT1-like protein iso ( 577) 3849 519.3 1.7e-146
XP_016857908 (OMIM: 611673) PREDICTED: TRMT1-like ( 550) 3343 452.7 1.8e-126
XP_011526426 (OMIM: 611669) PREDICTED: tRNA (guani ( 623) 251 46.3 0.00046
NP_060192 (OMIM: 611669) tRNA (guanine(26)-N(2))-d ( 659) 251 46.3 0.00048
XP_016882433 (OMIM: 611669) PREDICTED: tRNA (guani ( 659) 251 46.3 0.00048
NP_001129507 (OMIM: 611669) tRNA (guanine(26)-N(2) ( 659) 251 46.3 0.00048
XP_006722856 (OMIM: 611669) PREDICTED: tRNA (guani ( 445) 235 44.0 0.0015
XP_011526427 (OMIM: 611669) PREDICTED: tRNA (guani ( 445) 235 44.0 0.0015
>>NP_112196 (OMIM: 611673) TRMT1-like protein isoform 1 (733 aa)
initn: 4885 init1: 4885 opt: 4885 Z-score: 3485.6 bits: 655.6 E(85289): 2.1e-187
Smith-Waterman score: 4885; 100.0% identity (100.0% similar) in 733 aa overlap (1-733:1-733)
10 20 30 40 50 60
pF1KE3 MENMAEEELLPLEKEEVEVAQVQVPTPARDSAGVPAPAPDSALDSAPTPASAPAPAPALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 MENMAEEELLPLEKEEVEVAQVQVPTPARDSAGVPAPAPDSALDSAPTPASAPAPAPALA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QAPALSPSLASAPEEAKSKRHISIQRQLADLENLAFVTDGNFDSASSLNSDNLDAGNRQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 QAPALSPSLASAPEEAKSKRHISIQRQLADLENLAFVTDGNFDSASSLNSDNLDAGNRQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 CPLCPKEKFRACNSHKLRRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQITSKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 CPLCPKEKFRACNSHKLRRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQITSKM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 GAHYHCIICSATITRRTDMLGHVRRHMNKGETKSSYIAASTAKPPKEILKEADTDVQVCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 GAHYHCIICSATITRRTDMLGHVRRHMNKGETKSSYIAASTAKPPKEILKEADTDVQVCP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 NYSIPQKTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 NYSIPQKTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 VKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKMDANV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 VKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKMDANV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 LMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 LMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 IVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 IVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 KIQYLIHCQWCEERIFQKDGNMVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 KIQYLIHCQWCEERIFQKDGNMVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGF
490 500 510 520 530 540
550 560 570 580 590 600
pF1KE3 LKRMLFESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVNKQEENGVFIKTTDDTT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 LKRMLFESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVNKQEENGVFIKTTDDTT
550 560 570 580 590 600
610 620 630 640 650 660
pF1KE3 TDNYIAQGKRKSNEMITNLGKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 TDNYIAQGKRKSNEMITNLGKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQ
610 620 630 640 650 660
670 680 690 700 710 720
pF1KE3 AGFRVSRTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSESHVQSASEDTVTERVEMS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_112 AGFRVSRTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSESHVQSASEDTVTERVEMS
670 680 690 700 710 720
730
pF1KE3 VNDKAEASGCRRW
:::::::::::::
NP_112 VNDKAEASGCRRW
730
>>XP_011508330 (OMIM: 611673) PREDICTED: TRMT1-like prot (577 aa)
initn: 3849 init1: 3849 opt: 3849 Z-score: 2750.9 bits: 519.3 E(85289): 1.7e-146
Smith-Waterman score: 3849; 100.0% identity (100.0% similar) in 577 aa overlap (157-733:1-577)
130 140 150 160 170 180
pF1KE3 EKFRACNSHKLRRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQITSKMGAHYHC
::::::::::::::::::::::::::::::
XP_011 MCICHLPCRPVKPNIIGEQITSKMGAHYHC
10 20 30
190 200 210 220 230 240
pF1KE3 IICSATITRRTDMLGHVRRHMNKGETKSSYIAASTAKPPKEILKEADTDVQVCPNYSIPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IICSATITRRTDMLGHVRRHMNKGETKSSYIAASTAKPPKEILKEADTDVQVCPNYSIPQ
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE3 KTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNAVKVTIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNAVKVTIN
100 110 120 130 140 150
310 320 330 340 350 360
pF1KE3 DLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKMDANVLMHLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKMDANVLMHLRS
160 170 180 190 200 210
370 380 390 400 410 420
pF1KE3 FDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEY
220 230 240 250 260 270
430 440 450 460 470 480
pF1KE3 YKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAKKIQYLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 YKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAKKIQYLI
280 290 300 310 320 330
490 500 510 520 530 540
pF1KE3 HCQWCEERIFQKDGNMVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRMLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HCQWCEERIFQKDGNMVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRMLF
340 350 360 370 380 390
550 560 570 580 590 600
pF1KE3 ESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVNKQEENGVFIKTTDDTTTDNYIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVNKQEENGVFIKTTDDTTTDNYIA
400 410 420 430 440 450
610 620 630 640 650 660
pF1KE3 QGKRKSNEMITNLGKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQAGFRVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGKRKSNEMITNLGKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQAGFRVS
460 470 480 490 500 510
670 680 690 700 710 720
pF1KE3 RTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSESHVQSASEDTVTERVEMSVNDKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSESHVQSASEDTVTERVEMSVNDKAE
520 530 540 550 560 570
730
pF1KE3 ASGCRRW
:::::::
XP_011 ASGCRRW
>>NP_001189352 (OMIM: 611673) TRMT1-like protein isoform (577 aa)
initn: 3849 init1: 3849 opt: 3849 Z-score: 2750.9 bits: 519.3 E(85289): 1.7e-146
Smith-Waterman score: 3849; 100.0% identity (100.0% similar) in 577 aa overlap (157-733:1-577)
130 140 150 160 170 180
pF1KE3 EKFRACNSHKLRRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQITSKMGAHYHC
::::::::::::::::::::::::::::::
NP_001 MCICHLPCRPVKPNIIGEQITSKMGAHYHC
10 20 30
190 200 210 220 230 240
pF1KE3 IICSATITRRTDMLGHVRRHMNKGETKSSYIAASTAKPPKEILKEADTDVQVCPNYSIPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IICSATITRRTDMLGHVRRHMNKGETKSSYIAASTAKPPKEILKEADTDVQVCPNYSIPQ
40 50 60 70 80 90
250 260 270 280 290 300
pF1KE3 KTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNAVKVTIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNAVKVTIN
100 110 120 130 140 150
310 320 330 340 350 360
pF1KE3 DLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKMDANVLMHLRS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKMDANVLMHLRS
160 170 180 190 200 210
370 380 390 400 410 420
pF1KE3 FDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCNIVRTEY
220 230 240 250 260 270
430 440 450 460 470 480
pF1KE3 YKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAKKIQYLI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAKKIQYLI
280 290 300 310 320 330
490 500 510 520 530 540
pF1KE3 HCQWCEERIFQKDGNMVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRMLF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HCQWCEERIFQKDGNMVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGFLKRMLF
340 350 360 370 380 390
550 560 570 580 590 600
pF1KE3 ESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVNKQEENGVFIKTTDDTTTDNYIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVNKQEENGVFIKTTDDTTTDNYIA
400 410 420 430 440 450
610 620 630 640 650 660
pF1KE3 QGKRKSNEMITNLGKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQAGFRVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QGKRKSNEMITNLGKKQKTDVSTEHPPFYYNIHRHSIKGMNMPKLKKFLCYLSQAGFRVS
460 470 480 490 500 510
670 680 690 700 710 720
pF1KE3 RTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSESHVQSASEDTVTERVEMSVNDKAE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RTHFDPMGVRTDAPLMQFKSILLKYSTPTYTGGQSESHVQSASEDTVTERVEMSVNDKAE
520 530 540 550 560 570
730
pF1KE3 ASGCRRW
:::::::
NP_001 ASGCRRW
>>XP_016857908 (OMIM: 611673) PREDICTED: TRMT1-like prot (550 aa)
initn: 3599 init1: 3343 opt: 3343 Z-score: 2391.7 bits: 452.7 E(85289): 1.8e-126
Smith-Waterman score: 3343; 99.8% identity (100.0% similar) in 505 aa overlap (1-505:1-505)
10 20 30 40 50 60
pF1KE3 MENMAEEELLPLEKEEVEVAQVQVPTPARDSAGVPAPAPDSALDSAPTPASAPAPAPALA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MENMAEEELLPLEKEEVEVAQVQVPTPARDSAGVPAPAPDSALDSAPTPASAPAPAPALA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QAPALSPSLASAPEEAKSKRHISIQRQLADLENLAFVTDGNFDSASSLNSDNLDAGNRQA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QAPALSPSLASAPEEAKSKRHISIQRQLADLENLAFVTDGNFDSASSLNSDNLDAGNRQA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 CPLCPKEKFRACNSHKLRRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQITSKM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CPLCPKEKFRACNSHKLRRHLQNLHWKVSVEFEGYRMCICHLPCRPVKPNIIGEQITSKM
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 GAHYHCIICSATITRRTDMLGHVRRHMNKGETKSSYIAASTAKPPKEILKEADTDVQVCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GAHYHCIICSATITRRTDMLGHVRRHMNKGETKSSYIAASTAKPPKEILKEADTDVQVCP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 NYSIPQKTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NYSIPQKTDSYFNPKMKLNRQLIFCTLAALAEERKPLECLDAFGATGIMGLQWAKHLGNA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 VKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKMDANV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKMDANV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 LMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQHVARRHYGCN
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 IVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRGPTSADETAK
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 KIQYLIHCQWCEERIFQKDGNMVEENPYRQLPCNCHGSMPGKTAIELGPLWSSSLFNTGF
::::::::::::::::::::::::.
XP_016 KIQYLIHCQWCEERIFQKDGNMVEDYSANFVISYTGFPFVNRQDIRVSLLKLFTHAVQYM
490 500 510 520 530 540
>>XP_011526426 (OMIM: 611669) PREDICTED: tRNA (guanine(2 (623 aa)
initn: 284 init1: 194 opt: 251 Z-score: 193.9 bits: 46.3 E(85289): 0.00046
Smith-Waterman score: 272; 24.4% identity (55.3% similar) in 291 aa overlap (268-545:108-376)
240 250 260 270 280 290
pF1KE3 VCPNYSIPQKTDSYFNPKMKLNRQLIFCTLAALAE-ERKPLECLDAFGATGIMGLQWAKH
::..: .. :. :....:.:. ....: .
XP_011 KVVVDLSEQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALE
80 90 100 110 120 130
300 310 320 330 340 350
pF1KE3 LGNAVKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKM
. . .:. :: . .: ::..: .:: . .:. ..
XP_011 VPGLRSVVANDASTRAVDLIRRNVQLNDVAHLVQP----------------------SQA
140 150 160 170
360 370 380 390 400 410
pF1KE3 DANVLM--HLR---SFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQH
:: .:: : : :: : :::.:. ...::.: . . . :.. :: ::.. : ... .
XP_011 DARMLMYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGE
180 190 200 210 220 230
420 430 440 450 460 470
pF1KE3 VARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRG
. .:: .... .:.: :::. .. : .. . :.... . .: : :::. :
XP_011 TCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSISADFYVRVFVRVFTG
240 250 260 270 280 290
480 490 500 510 520
pF1KE3 PTSADETAKKIQYLIHCQWCEERIFQKDGNMVEENPYR-QLPCNCHGSM-P-----GKTA
... .:.: ...: : .:. :. : .. : . : :.
XP_011 QAKVKASASKQALVFQCVGCGAFHLQRLGKASGVPSGRAKFSAACGPPVTPECEHCGQRH
300 310 320 330 340 350
530 540 550 560 570 580
pF1KE3 IELGPLWSSSLFNTGFLKRMLFESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVN
::.:. . . :. :.:
XP_011 QLGGPMWAEPIHDLDFVGRVLEAVSANPGRFHTSERIRGVLSVITEELPDVPLYYTLDQL
360 370 380 390 400 410
>>NP_060192 (OMIM: 611669) tRNA (guanine(26)-N(2))-dimet (659 aa)
initn: 284 init1: 194 opt: 251 Z-score: 193.6 bits: 46.3 E(85289): 0.00048
Smith-Waterman score: 272; 24.4% identity (55.3% similar) in 291 aa overlap (268-545:144-412)
240 250 260 270 280 290
pF1KE3 VCPNYSIPQKTDSYFNPKMKLNRQLIFCTLAALAE-ERKPLECLDAFGATGIMGLQWAKH
::..: .. :. :....:.:. ....: .
NP_060 KVVVDLSEQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALE
120 130 140 150 160 170
300 310 320 330 340 350
pF1KE3 LGNAVKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKM
. . .:. :: . .: ::..: .:: . .:. ..
NP_060 VPGLRSVVANDASTRAVDLIRRNVQLNDVAHLVQP----------------------SQA
180 190 200 210
360 370 380 390 400 410
pF1KE3 DANVLM--HLR---SFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQH
:: .:: : : :: : :::.:. ...::.: . . . :.. :: ::.. : ... .
NP_060 DARMLMYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGE
220 230 240 250 260 270
420 430 440 450 460 470
pF1KE3 VARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRG
. .:: .... .:.: :::. .. : .. . :.... . .: : :::. :
NP_060 TCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSISADFYVRVFVRVFTG
280 290 300 310 320 330
480 490 500 510 520
pF1KE3 PTSADETAKKIQYLIHCQWCEERIFQKDGNMVEENPYR-QLPCNCHGSM-P-----GKTA
... .:.: ...: : .:. :. : .. : . : :.
NP_060 QAKVKASASKQALVFQCVGCGAFHLQRLGKASGVPSGRAKFSAACGPPVTPECEHCGQRH
340 350 360 370 380 390
530 540 550 560 570 580
pF1KE3 IELGPLWSSSLFNTGFLKRMLFESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVN
::.:. . . :. :.:
NP_060 QLGGPMWAEPIHDLDFVGRVLEAVSANPGRFHTSERIRGVLSVITEELPDVPLYYTLDQL
400 410 420 430 440 450
>>XP_016882433 (OMIM: 611669) PREDICTED: tRNA (guanine(2 (659 aa)
initn: 284 init1: 194 opt: 251 Z-score: 193.6 bits: 46.3 E(85289): 0.00048
Smith-Waterman score: 272; 24.4% identity (55.3% similar) in 291 aa overlap (268-545:144-412)
240 250 260 270 280 290
pF1KE3 VCPNYSIPQKTDSYFNPKMKLNRQLIFCTLAALAE-ERKPLECLDAFGATGIMGLQWAKH
::..: .. :. :....:.:. ....: .
XP_016 KVVVDLSEQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALE
120 130 140 150 160 170
300 310 320 330 340 350
pF1KE3 LGNAVKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKM
. . .:. :: . .: ::..: .:: . .:. ..
XP_016 VPGLRSVVANDASTRAVDLIRRNVQLNDVAHLVQP----------------------SQA
180 190 200 210
360 370 380 390 400 410
pF1KE3 DANVLM--HLR---SFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQH
:: .:: : : :: : :::.:. ...::.: . . . :.. :: ::.. : ... .
XP_016 DARMLMYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGE
220 230 240 250 260 270
420 430 440 450 460 470
pF1KE3 VARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRG
. .:: .... .:.: :::. .. : .. . :.... . .: : :::. :
XP_016 TCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSISADFYVRVFVRVFTG
280 290 300 310 320 330
480 490 500 510 520
pF1KE3 PTSADETAKKIQYLIHCQWCEERIFQKDGNMVEENPYR-QLPCNCHGSM-P-----GKTA
... .:.: ...: : .:. :. : .. : . : :.
XP_016 QAKVKASASKQALVFQCVGCGAFHLQRLGKASGVPSGRAKFSAACGPPVTPECEHCGQRH
340 350 360 370 380 390
530 540 550 560 570 580
pF1KE3 IELGPLWSSSLFNTGFLKRMLFESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVN
::.:. . . :. :.:
XP_016 QLGGPMWAEPIHDLDFVGRVLEAVSANPGRFHTSERIRGVLSVITEELPDVPLYYTLDQL
400 410 420 430 440 450
>>NP_001129507 (OMIM: 611669) tRNA (guanine(26)-N(2))-di (659 aa)
initn: 284 init1: 194 opt: 251 Z-score: 193.6 bits: 46.3 E(85289): 0.00048
Smith-Waterman score: 272; 24.4% identity (55.3% similar) in 291 aa overlap (268-545:144-412)
240 250 260 270 280 290
pF1KE3 VCPNYSIPQKTDSYFNPKMKLNRQLIFCTLAALAE-ERKPLECLDAFGATGIMGLQWAKH
::..: .. :. :....:.:. ....: .
NP_001 KVVVDLSEQEEEKVELKESENLASGDQPRTAAVGEICEEGLHVLEGLAASGLRSIRFALE
120 130 140 150 160 170
300 310 320 330 340 350
pF1KE3 LGNAVKVTINDLNENSVTLIQENCHLNKLKVVVDSKEKEKSDDILEEGEKNLGNIKVTKM
. . .:. :: . .: ::..: .:: . .:. ..
NP_001 VPGLRSVVANDASTRAVDLIRRNVQLNDVAHLVQP----------------------SQA
180 190 200 210
360 370 380 390 400 410
pF1KE3 DANVLM--HLR---SFDFIHLDPFGTSVNYLDSAFRNIRNLGIVSVTSTDISSLYAKAQH
:: .:: : : :: : :::.:. ...::.: . . . :.. :: ::.. : ... .
NP_001 DARMLMYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGE
220 230 240 250 260 270
420 430 440 450 460 470
pF1KE3 VARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAVALEHFVLVVVRVLRG
. .:: .... .:.: :::. .. : .. . :.... . .: : :::. :
NP_001 TCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSISADFYVRVFVRVFTG
280 290 300 310 320 330
480 490 500 510 520
pF1KE3 PTSADETAKKIQYLIHCQWCEERIFQKDGNMVEENPYR-QLPCNCHGSM-P-----GKTA
... .:.: ...: : .:. :. : .. : . : :.
NP_001 QAKVKASASKQALVFQCVGCGAFHLQRLGKASGVPSGRAKFSAACGPPVTPECEHCGQRH
340 350 360 370 380 390
530 540 550 560 570 580
pF1KE3 IELGPLWSSSLFNTGFLKRMLFESLHHGLDDIQTLIKTLIFESECTPQSQFSIHASSNVN
::.:. . . :. :.:
NP_001 QLGGPMWAEPIHDLDFVGRVLEAVSANPGRFHTSERIRGVLSVITEELPDVPLYYTLDQL
400 410 420 430 440 450
>>XP_006722856 (OMIM: 611669) PREDICTED: tRNA (guanine(2 (445 aa)
initn: 247 init1: 194 opt: 235 Z-score: 184.5 bits: 44.0 E(85289): 0.0015
Smith-Waterman score: 235; 25.3% identity (57.0% similar) in 186 aa overlap (367-545:13-198)
340 350 360 370 380 390
pF1KE3 SDDILEEGEKNLGNIKVTKMDANVLMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVS
:: : :::.:. ...::.: . . . :..
XP_006 MLMYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLC
10 20 30 40
400 410 420 430 440 450
pF1KE3 VTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAV
:: ::.. : ... .. .:: .... .:.: :::. .. : .. . :...
XP_006 VTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSI
50 60 70 80 90 100
460 470 480 490 500 510
pF1KE3 ALEHFVLVVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGNMVEENPYR-QLPCNC
. . .: : :::. : ... .:.: ...: : .:. :. : .. :
XP_006 SADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLGKASGVPSGRAKFSAAC
110 120 130 140 150 160
520 530 540 550 560
pF1KE3 HGSM-P-----GKTAIELGPLWSSSLFNTGFLKRMLFESLHHGLDDIQTLIKTLIFESEC
. : :. ::.:. . . :. :.:
XP_006 GPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPGRFHTSERIRGVLSVIT
170 180 190 200 210 220
570 580 590 600 610 620
pF1KE3 TPQSQFSIHASSNVNKQEENGVFIKTTDDTTTDNYIAQGKRKSNEMITNLGKKQKTDVST
XP_006 EELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALW
230 240 250 260 270 280
>>XP_011526427 (OMIM: 611669) PREDICTED: tRNA (guanine(2 (445 aa)
initn: 247 init1: 194 opt: 235 Z-score: 184.5 bits: 44.0 E(85289): 0.0015
Smith-Waterman score: 235; 25.3% identity (57.0% similar) in 186 aa overlap (367-545:13-198)
340 350 360 370 380 390
pF1KE3 SDDILEEGEKNLGNIKVTKMDANVLMHLRSFDFIHLDPFGTSVNYLDSAFRNIRNLGIVS
:: : :::.:. ...::.: . . . :..
XP_011 MLMYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLC
10 20 30 40
400 410 420 430 440 450
pF1KE3 VTSTDISSLYAKAQHVARRHYGCNIVRTEYYKELAARIVVAAVARAAARCNKGIEVLFAV
:: ::.. : ... .. .:: .... .:.: :::. .. : .. . :...
XP_011 VTCTDMAVLAGNSGETCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSI
50 60 70 80 90 100
460 470 480 490 500 510
pF1KE3 ALEHFVLVVVRVLRGPTSADETAKKIQYLIHCQWCEERIFQKDGNMVEENPYR-QLPCNC
. . .: : :::. : ... .:.: ...: : .:. :. : .. :
XP_011 SADFYVRVFVRVFTGQAKVKASASKQALVFQCVGCGAFHLQRLGKASGVPSGRAKFSAAC
110 120 130 140 150 160
520 530 540 550 560
pF1KE3 HGSM-P-----GKTAIELGPLWSSSLFNTGFLKRMLFESLHHGLDDIQTLIKTLIFESEC
. : :. ::.:. . . :. :.:
XP_011 GPPVTPECEHCGQRHQLGGPMWAEPIHDLDFVGRVLEAVSANPGRFHTSERIRGVLSVIT
170 180 190 200 210 220
570 580 590 600 610 620
pF1KE3 TPQSQFSIHASSNVNKQEENGVFIKTTDDTTTDNYIAQGKRKSNEMITNLGKKQKTDVST
XP_011 EELPDVPLYYTLDQLSSTIHCNTPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALW
230 240 250 260 270 280
733 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 03:48:06 2016 done: Mon Nov 7 03:48:08 2016
Total Scan time: 10.860 Total Display time: 0.090
Function used was FASTA [36.3.4 Apr, 2011]