Result of FASTA (ccds) for
pFN21AE3249
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3249, 551 aa
1>>>pF1KE3249 551 - 551 aa - 551 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.6556+/-0.00103; mu= 16.4618+/- 0.061
mean_var=61.7689+/-12.547, 0's: 0 Z-trim(104.2): 32 B-trim: 298 in 2/48
Lambda= 0.163188
statistics sampled from 7790 (7803) to 7790 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.606), E-opt: 0.2 (0.24), width: 16
Scan time: 3.330
The best scores are: opt bits E(32554)
CCDS611.2 FGGY gene_id:55277|Hs108|chr1 ( 551) 3726 886.0 0
CCDS44155.1 FGGY gene_id:55277|Hs108|chr1 ( 575) 2818 672.3 4.3e-193
CCDS58003.1 FGGY gene_id:55277|Hs108|chr1 ( 463) 2677 639.1 3.5e-183
CCDS60155.1 FGGY gene_id:55277|Hs108|chr1 ( 252) 1667 401.2 7.6e-112
>>CCDS611.2 FGGY gene_id:55277|Hs108|chr1 (551 aa)
initn: 3726 init1: 3726 opt: 3726 Z-score: 4735.6 bits: 886.0 E(32554): 0
Smith-Waterman score: 3726; 99.8% identity (100.0% similar) in 551 aa overlap (1-551:1-551)
10 20 30 40 50 60
pF1KE3 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKKWEPQFNHHEQSSEDIWA
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
CCDS61 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKNWEPQFNHHEQSSEDIWA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 ACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 SQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 SQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMVTGLKLSQDLDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMVTGLKLSQDLDDL
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 AILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 AILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQ
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 EVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS61 EVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEH
490 500 510 520 530 540
550
pF1KE3 QKEYLAIMNDD
:::::::::::
CCDS61 QKEYLAIMNDD
550
>>CCDS44155.1 FGGY gene_id:55277|Hs108|chr1 (575 aa)
initn: 2818 init1: 2818 opt: 2818 Z-score: 3580.0 bits: 672.3 E(32554): 4.3e-193
Smith-Waterman score: 3668; 95.7% identity (95.8% similar) in 575 aa overlap (1-551:1-575)
10 20 30 40 50 60
pF1KE3 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKKWEPQFNHHEQSSEDIWA
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
CCDS44 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKNWEPQFNHHEQSSEDIWA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 ACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 SQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKAT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKAT
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ
310 320 330 340 350 360
370 380 390 400
pF1KE3 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGM-------------
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMRTTGYLYIPALAA
370 380 390 400 410 420
410 420 430 440 450
pF1KE3 -----------VTGLKLSQDLDDLAILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCG
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 LHSPSSLLSPQVTGLKLSQDLDDLAILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCG
430 440 450 460 470 480
460 470 480 490 500 510
pF1KE3 GLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKV
490 500 510 520 530 540
520 530 540 550
pF1KE3 VFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD
:::::::::::::::::::::::::::::::::::
CCDS44 VFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD
550 560 570
>>CCDS58003.1 FGGY gene_id:55277|Hs108|chr1 (463 aa)
initn: 2676 init1: 2676 opt: 2677 Z-score: 3402.2 bits: 639.1 E(32554): 3.5e-183
Smith-Waterman score: 2948; 83.8% identity (84.0% similar) in 551 aa overlap (1-551:1-463)
10 20 30 40 50 60
pF1KE3 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKKWEPQFNHHEQSSEDIWA
::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
CCDS58 MSGGEQKPERYYVGVDVGTGSVRAALVDQSGVLLAFADQPIKNWEPQFNHHEQSSEDIWA
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ACCVVTKKVVQGIDLNQIRGLGFDATCSLVVLDKQFHPLPVNQEGDSHRNVIMWLDHRAV
:::::::
CCDS58 ACCVVTK-----------------------------------------------------
130 140 150 160 170 180
pF1KE3 SQVNRINETKHSVLQYVGGVMSVEMQAPKLLWLKENLREICWDKAGHFFDLPDFLSWKAT
:::::::::::::::::::::::::
CCDS58 -----------------------------------NLREICWDKAGHFFDLPDFLSWKAT
70 80 90
190 200 210 220 230 240
pF1KE3 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GVTARSLCSLVCKWTYSAEKGWDDSFWKMIGLEDFVADNYSKIGNQVLPPGASLGNGLTP
100 110 120 130 140 150
250 260 270 280 290 300
pF1KE3 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EAARDLGLLPGIAVAASLIDAHAGGLGVIGADVRGHGLICEGQPVTSRLAVICGTSSCHM
160 170 180 190 200 210
310 320 330 340 350 360
pF1KE3 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 GISKDPIFVPGVWGPYFSAMVPGFWLNEGGQSVTGKLIDHMVQGHAAFPELQVKATARCQ
220 230 240 250 260 270
370 380 390 400 410 420
pF1KE3 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMVTGLKLSQDLDDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SIYAYLNSHLDLIKKAQPVGFLTVDLHVWPDFHGNRSPLADLTLKGMVTGLKLSQDLDDL
280 290 300 310 320 330
430 440 450 460 470 480
pF1KE3 AILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 AILYLATVQAIALGTRFIIEAMEAAGHSISTLFLCGGLSKNPLFVQMHADITGMPVVLSQ
340 350 360 370 380 390
490 500 510 520 530 540
pF1KE3 EVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EVESVLVGAAVLGACASGDFASVQEAMAKMSKVGKVVFPRLQDKKYYDKKYQVFLKLVEH
400 410 420 430 440 450
550
pF1KE3 QKEYLAIMNDD
:::::::::::
CCDS58 QKEYLAIMNDD
460
>>CCDS60155.1 FGGY gene_id:55277|Hs108|chr1 (252 aa)
initn: 1667 init1: 1667 opt: 1667 Z-score: 2121.5 bits: 401.2 E(32554): 7.6e-112
Smith-Waterman score: 1667; 100.0% identity (100.0% similar) in 252 aa overlap (300-551:1-252)
270 280 290 300 310 320
pF1KE3 GADVRGHGLICEGQPVTSRLAVICGTSSCHMGISKDPIFVPGVWGPYFSAMVPGFWLNEG
::::::::::::::::::::::::::::::
CCDS60 MGISKDPIFVPGVWGPYFSAMVPGFWLNEG
10 20 30
330 340 350 360 370 380
pF1KE3 GQSVTGKLIDHMVQGHAAFPELQVKATARCQSIYAYLNSHLDLIKKAQPVGFLTVDLHVW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 GQSVTGKLIDHMVQGHAAFPELQVKATARCQSIYAYLNSHLDLIKKAQPVGFLTVDLHVW
40 50 60 70 80 90
390 400 410 420 430 440
pF1KE3 PDFHGNRSPLADLTLKGMVTGLKLSQDLDDLAILYLATVQAIALGTRFIIEAMEAAGHSI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 PDFHGNRSPLADLTLKGMVTGLKLSQDLDDLAILYLATVQAIALGTRFIIEAMEAAGHSI
100 110 120 130 140 150
450 460 470 480 490 500
pF1KE3 STLFLCGGLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS60 STLFLCGGLSKNPLFVQMHADITGMPVVLSQEVESVLVGAAVLGACASGDFASVQEAMAK
160 170 180 190 200 210
510 520 530 540 550
pF1KE3 MSKVGKVVFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD
::::::::::::::::::::::::::::::::::::::::::
CCDS60 MSKVGKVVFPRLQDKKYYDKKYQVFLKLVEHQKEYLAIMNDD
220 230 240 250
551 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:59:59 2016 done: Sun Nov 6 06:00:00 2016
Total Scan time: 3.330 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]