Result of FASTA (ccds) for
pFN21AE3240
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3240, 562 aa
1>>>pF1KE3240 562 - 562 aa - 562 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.9814+/-0.000965; mu= 15.2965+/- 0.058
mean_var=77.0224+/-15.467, 0's: 0 Z-trim(105.8): 31 B-trim: 203 in 1/49
Lambda= 0.146139
statistics sampled from 8597 (8619) to 8597 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.625), E-opt: 0.2 (0.265), width: 16
Scan time: 3.020
The best scores are: opt bits E(32554)
CCDS675.1 AK5 gene_id:26289|Hs108|chr1 ( 562) 3704 790.7 0
CCDS676.1 AK5 gene_id:26289|Hs108|chr1 ( 536) 3539 755.9 2.7e-218
CCDS6881.1 AK1 gene_id:203|Hs108|chr9 ( 194) 766 171.1 1.1e-42
CCDS83419.1 AK1 gene_id:203|Hs108|chr9 ( 210) 766 171.1 1.2e-42
CCDS549.1 CMPK1 gene_id:51727|Hs108|chr1 ( 228) 441 102.6 5.3e-22
CCDS629.1 AK4 gene_id:205|Hs108|chr1 ( 223) 273 67.2 2.4e-11
>>CCDS675.1 AK5 gene_id:26289|Hs108|chr1 (562 aa)
initn: 3704 init1: 3704 opt: 3704 Z-score: 4220.3 bits: 790.7 E(32554): 0
Smith-Waterman score: 3704; 100.0% identity (100.0% similar) in 562 aa overlap (1-562:1-562)
10 20 30 40 50 60
pF1KE3 MNTNDAKEYLARREIPQLFESLLNGLMCSKPEDPVEYLESCLQKVKELGGCDKVKWDTFV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 MNTNDAKEYLARREIPQLFESLLNGLMCSKPEDPVEYLESCLQKVKELGGCDKVKWDTFV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SQEKKTLPPLNGGQSRRSFLRNVMPENSNFPYRRYDRLPPIHQFSIESDTDLSETAELIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 SQEKKTLPPLNGGQSRRSFLRNVMPENSNFPYRRYDRLPPIHQFSIESDTDLSETAELIE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 EYEVFDPTRPRPKIILVIGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSTSSNRKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 EYEVFDPTRPRPKIILVIGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSTSSNRKW
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 SLIAKIITTGELAPQETTITEIKQKLMQIPDEEGIVIDGFPRDVAQALSFEDQICTPDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 SLIAKIITTGELAPQETTITEIKQKLMQIPDEEGIVIDGFPRDVAQALSFEDQICTPDLV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 VFLACANQRLKERLLKRAEQQGRPDDNVKATQRRLMNFKQNAAPLVKYFQEKGLIMTFDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 VFLACANQRLKERLLKRAEQQGRPDDNVKATQRRLMNFKQNAAPLVKYFQEKGLIMTFDA
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 DRDEDEVFYDISMAVDNKLFPNKEAAAGSSDLDPSMILDTGEIIDTGSDYEDQGDDQLNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 DRDEDEVFYDISMAVDNKLFPNKEAAAGSSDLDPSMILDTGEIIDTGSDYEDQGDDQLNV
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 FGEDTMGGFMEDLRKCKIIFIIGGPGSGKGTQCEKLVEKYGFTHLSTGELLREELASESE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 FGEDTMGGFMEDLRKCKIIFIIGGPGSGKGTQCEKLVEKYGFTHLSTGELLREELASESE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 RSKLIRDIMERGDLVPSGIVLELLKEAMVASLGDTRGFLIDGYPREVKQGEEFGRRIGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 RSKLIRDIMERGDLVPSGIVLELLKEAMVASLGDTRGFLIDGYPREVKQGEEFGRRIGDP
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 QLVICMDCSADTMTNRLLQRSRSSLPVDDTTKTIAKRLEAYYRASIPVIAYYETKTQLHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 QLVICMDCSADTMTNRLLQRSRSSLPVDDTTKTIAKRLEAYYRASIPVIAYYETKTQLHK
490 500 510 520 530 540
550 560
pF1KE3 INAEGTPEDVFLQLCTAIDSIF
::::::::::::::::::::::
CCDS67 INAEGTPEDVFLQLCTAIDSIF
550 560
>>CCDS676.1 AK5 gene_id:26289|Hs108|chr1 (536 aa)
initn: 3539 init1: 3539 opt: 3539 Z-score: 4032.6 bits: 755.9 E(32554): 2.7e-218
Smith-Waterman score: 3539; 100.0% identity (100.0% similar) in 536 aa overlap (27-562:1-536)
10 20 30 40 50 60
pF1KE3 MNTNDAKEYLARREIPQLFESLLNGLMCSKPEDPVEYLESCLQKVKELGGCDKVKWDTFV
::::::::::::::::::::::::::::::::::
CCDS67 MCSKPEDPVEYLESCLQKVKELGGCDKVKWDTFV
10 20 30
70 80 90 100 110 120
pF1KE3 SQEKKTLPPLNGGQSRRSFLRNVMPENSNFPYRRYDRLPPIHQFSIESDTDLSETAELIE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 SQEKKTLPPLNGGQSRRSFLRNVMPENSNFPYRRYDRLPPIHQFSIESDTDLSETAELIE
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE3 EYEVFDPTRPRPKIILVIGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSTSSNRKW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 EYEVFDPTRPRPKIILVIGGPGSGKGTQSLKIAERYGFQYISVGELLRKKIHSTSSNRKW
100 110 120 130 140 150
190 200 210 220 230 240
pF1KE3 SLIAKIITTGELAPQETTITEIKQKLMQIPDEEGIVIDGFPRDVAQALSFEDQICTPDLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 SLIAKIITTGELAPQETTITEIKQKLMQIPDEEGIVIDGFPRDVAQALSFEDQICTPDLV
160 170 180 190 200 210
250 260 270 280 290 300
pF1KE3 VFLACANQRLKERLLKRAEQQGRPDDNVKATQRRLMNFKQNAAPLVKYFQEKGLIMTFDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 VFLACANQRLKERLLKRAEQQGRPDDNVKATQRRLMNFKQNAAPLVKYFQEKGLIMTFDA
220 230 240 250 260 270
310 320 330 340 350 360
pF1KE3 DRDEDEVFYDISMAVDNKLFPNKEAAAGSSDLDPSMILDTGEIIDTGSDYEDQGDDQLNV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 DRDEDEVFYDISMAVDNKLFPNKEAAAGSSDLDPSMILDTGEIIDTGSDYEDQGDDQLNV
280 290 300 310 320 330
370 380 390 400 410 420
pF1KE3 FGEDTMGGFMEDLRKCKIIFIIGGPGSGKGTQCEKLVEKYGFTHLSTGELLREELASESE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 FGEDTMGGFMEDLRKCKIIFIIGGPGSGKGTQCEKLVEKYGFTHLSTGELLREELASESE
340 350 360 370 380 390
430 440 450 460 470 480
pF1KE3 RSKLIRDIMERGDLVPSGIVLELLKEAMVASLGDTRGFLIDGYPREVKQGEEFGRRIGDP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 RSKLIRDIMERGDLVPSGIVLELLKEAMVASLGDTRGFLIDGYPREVKQGEEFGRRIGDP
400 410 420 430 440 450
490 500 510 520 530 540
pF1KE3 QLVICMDCSADTMTNRLLQRSRSSLPVDDTTKTIAKRLEAYYRASIPVIAYYETKTQLHK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS67 QLVICMDCSADTMTNRLLQRSRSSLPVDDTTKTIAKRLEAYYRASIPVIAYYETKTQLHK
460 470 480 490 500 510
550 560
pF1KE3 INAEGTPEDVFLQLCTAIDSIF
::::::::::::::::::::::
CCDS67 INAEGTPEDVFLQLCTAIDSIF
520 530
>>CCDS6881.1 AK1 gene_id:203|Hs108|chr9 (194 aa)
initn: 1139 init1: 748 opt: 766 Z-score: 879.8 bits: 171.1 E(32554): 1.1e-42
Smith-Waterman score: 766; 58.6% identity (85.9% similar) in 191 aa overlap (371-561:3-193)
350 360 370 380 390 400
pF1KE3 GEIIDTGSDYEDQGDDQLNVFGEDTMGGFMEDLRKCKIIFIIGGPGSGKGTQCEKLVEKY
: :.: ::::..:::::::::::::.:.::
CCDS68 MEEKLKKTKIIFVVGGPGSGKGTQCEKIVQKY
10 20 30
410 420 430 440 450 460
pF1KE3 GFTHLSTGELLREELASESERSKLIRDIMERGDLVPSGIVLELLKEAMVASLGDTRGFLI
:.::::::.::: :..: : :.: . .:::.:.::: ::..:..::::... ..::::
CCDS68 GYTHLSTGDLLRSEVSSGSARGKKLSEIMEKGQLVPLETVLDMLRDAMVAKVNTSKGFLI
40 50 60 70 80 90
470 480 490 500 510 520
pF1KE3 DGYPREVKQGEEFGRRIGDPQLVICMDCSADTMTNRLLQRSRSSLPVDDTTKTIAKRLEA
:::::::.::::: ::::.: :.. .: . .:::.:::.:...: :::. .:: ::::.
CCDS68 DGYPREVQQGEEFERRIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLET
100 110 120 130 140 150
530 540 550 560
pF1KE3 YYRASIPVIAYYETKTQLHKINAEGTPEDVFLQLCTAIDSIF
::.:. ::::.:: . ..:.::::. ..:: :.:: .:..
CCDS68 YYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHLDALK
160 170 180 190
>>CCDS83419.1 AK1 gene_id:203|Hs108|chr9 (210 aa)
initn: 1139 init1: 748 opt: 766 Z-score: 879.3 bits: 171.1 E(32554): 1.2e-42
Smith-Waterman score: 766; 58.6% identity (85.9% similar) in 191 aa overlap (371-561:19-209)
350 360 370 380 390 400
pF1KE3 GEIIDTGSDYEDQGDDQLNVFGEDTMGGFMEDLRKCKIIFIIGGPGSGKGTQCEKLVEKY
: :.: ::::..:::::::::::::.:.::
CCDS83 MGCCSSSDPRREDDLRAREKLKKTKIIFVVGGPGSGKGTQCEKIVQKY
10 20 30 40
410 420 430 440 450 460
pF1KE3 GFTHLSTGELLREELASESERSKLIRDIMERGDLVPSGIVLELLKEAMVASLGDTRGFLI
:.::::::.::: :..: : :.: . .:::.:.::: ::..:..::::... ..::::
CCDS83 GYTHLSTGDLLRSEVSSGSARGKKLSEIMEKGQLVPLETVLDMLRDAMVAKVNTSKGFLI
50 60 70 80 90 100
470 480 490 500 510 520
pF1KE3 DGYPREVKQGEEFGRRIGDPQLVICMDCSADTMTNRLLQRSRSSLPVDDTTKTIAKRLEA
:::::::.::::: ::::.: :.. .: . .:::.:::.:...: :::. .:: ::::.
CCDS83 DGYPREVQQGEEFERRIGQPTLLLYVDAGPETMTQRLLKRGETSGRVDDNEETIKKRLET
110 120 130 140 150 160
530 540 550 560
pF1KE3 YYRASIPVIAYYETKTQLHKINAEGTPEDVFLQLCTAIDSIF
::.:. ::::.:: . ..:.::::. ..:: :.:: .:..
CCDS83 YYKATEPVIAFYEKRGIVRKVNAEGSVDSVFSQVCTHLDALK
170 180 190 200 210
>>CCDS549.1 CMPK1 gene_id:51727|Hs108|chr1 (228 aa)
initn: 407 init1: 187 opt: 441 Z-score: 508.4 bits: 102.6 E(32554): 5.3e-22
Smith-Waterman score: 441; 36.6% identity (71.1% similar) in 194 aa overlap (373-559:32-225)
350 360 370 380 390 400
pF1KE3 IIDTGSDYEDQGDDQLNVFGEDTMGGFMEDLRKCKIIFIIGGPGSGKGTQCEKLVEKYGF
: : ..:..::::.:::::: ..:::::.
CCDS54 LSRCRSGLLHVLGLSFLLQTRRPILLCSPRLMKPLVVFVLGGPGAGKGTQCARIVEKYGY
10 20 30 40 50 60
410 420 430 440 450
pF1KE3 THLSTGELLREELAS-ESERSKLIRDIMERGDLVPSGIVLELLKEAM---VASLGDTRGF
::::.:::::.: . .:. ..::. ...: .:: :.. :::. : .:. .. :
CCDS54 THLSAGELLRDERKNPDSQYGELIEKYIKEGKIVPVEITISLLKREMDQTMAANAQKNKF
70 80 90 100 110 120
460 470 480 490 500 510
pF1KE3 LIDGYPREVKQGEEFGRRI---GDPQLVICMDCSADTMTNRLLQRSRSSLPVDDTTKTIA
::::.::. . . ... . .: ..:. .::. . .: :.:..:: ::. ...
CCDS54 LIDGFPRNQDNLQGWNKTMDGKADVSFVLFFDCNNEICIERCLERGKSSGRSDDNRESLE
130 140 150 160 170 180
520 530 540 550 560
pF1KE3 KRLEAYYRASIPVIAYYETKTQLHKINAEGTPEDVFLQLCTAIDSIF
::...: ... :.: :: ...::.: . ..:: .. .:
CCDS54 KRIQTYLQSTKPIIDLYEEMGKVKKIDASKSVDEVFDEVVQIFDKEG
190 200 210 220
>>CCDS629.1 AK4 gene_id:205|Hs108|chr1 (223 aa)
initn: 401 init1: 181 opt: 273 Z-score: 317.1 bits: 67.2 E(32554): 2.4e-11
Smith-Waterman score: 288; 29.7% identity (62.1% similar) in 195 aa overlap (381-546:10-199)
360 370 380 390 400 410
pF1KE3 EDQGDDQLNVFGEDTMGGFMEDLRKCKIIFIIGGPGSGKGTQCEKLVEKYGFTHLSTGEL
:.: ::::::: :.......:. :::.:..
CCDS62 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHF
10 20 30
420 430 440 450 460
pF1KE3 LREELASESERSKLIRDIMERGDLVPSGIVLELLKEAMVASLGDTRG--FLIDGYPREVK
:::.. . .: ... .. .:.. :::. .. .: :.. : . :: .:.::.:: .
CCDS62 LRENIKASTEVGEMAKQYIEKSLLVPDHVITRL----MMSELENRRGQHWLLDGFPRTLG
40 50 60 70 80 90
470 480 490 500
pF1KE3 QGEEFGRRIGDPQLVICMDCSADTMTNRLLQR------SR-----------------SSL
:.: . . : . .::: .. .:. .:: .: .: ..
CCDS62 QAEALDK-ICEVDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGE
100 110 120 130 140 150
510 520 530 540 550 560
pF1KE3 PV----DDTTKTIAKRLEAYYRASIPVIAYYETKTQLHKINAEGTPEDVFLQLCTAIDSI
:. :: ...: ::. : .. ::: :... ::.... :
CCDS62 PLVQQEDDKPEAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTETNKIWPYVYTLFSNKI
160 170 180 190 200 210
pF1KE3 F
CCDS62 TPIQSKEAY
220
562 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:54:38 2016 done: Sun Nov 6 05:54:38 2016
Total Scan time: 3.020 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]