Result of FASTA (ccds) for
pFN21AE3232
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3232, 540 aa
1>>>pF1KE3232 540 - 540 aa - 540 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.8374+/-0.00102; mu= 11.9699+/- 0.061
mean_var=138.0800+/-27.849, 0's: 0 Z-trim(108.2): 40 B-trim: 0 in 0/53
Lambda= 0.109146
statistics sampled from 10008 (10027) to 10008 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.308), width: 16
Scan time: 3.520
The best scores are: opt bits E(32554)
CCDS47196.1 NPR3 gene_id:4883|Hs108|chr5 ( 540) 3593 577.8 1.1e-164
CCDS56357.1 NPR3 gene_id:4883|Hs108|chr5 ( 541) 3567 573.7 1.9e-163
CCDS56356.1 NPR3 gene_id:4883|Hs108|chr5 ( 324) 1884 308.5 7.7e-84
CCDS6590.1 NPR2 gene_id:4882|Hs108|chr9 (1047) 509 92.4 2.8e-18
CCDS1051.1 NPR1 gene_id:4881|Hs108|chr1 (1061) 478 87.5 8.3e-17
>>CCDS47196.1 NPR3 gene_id:4883|Hs108|chr5 (540 aa)
initn: 3593 init1: 3593 opt: 3593 Z-score: 3070.1 bits: 577.8 E(32554): 1.1e-164
Smith-Waterman score: 3593; 100.0% identity (100.0% similar) in 540 aa overlap (1-540:1-540)
10 20 30 40 50 60
pF1KE3 MPSLLVLTFSPCVLLGWALLAGGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MPSLLVLTFSPCVLLGWALLAGGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 QDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 AAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 AAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 YAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 YAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 DLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 DLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 SWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 FHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 FHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIA
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 MTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCKSCGLEE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 MTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCKSCGLEE
430 440 450 460 470 480
490 500 510 520 530 540
pF1KE3 SAVTGIVVGALLGAGLLMAFYFFRKKYRITIERRTQQEESNLGKHRELREDSIRSHFSVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS47 SAVTGIVVGALLGAGLLMAFYFFRKKYRITIERRTQQEESNLGKHRELREDSIRSHFSVA
490 500 510 520 530 540
>>CCDS56357.1 NPR3 gene_id:4883|Hs108|chr5 (541 aa)
initn: 3248 init1: 3186 opt: 3567 Z-score: 3047.9 bits: 573.7 E(32554): 1.9e-163
Smith-Waterman score: 3567; 99.6% identity (99.6% similar) in 541 aa overlap (1-540:1-541)
10 20 30 40 50 60
pF1KE3 MPSLLVLTFSPCVLLGWALLAGGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MPSLLVLTFSPCVLLGWALLAGGTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 QDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 QDDSYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRV
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 AAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 AAARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 YAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 YAKMGEMMLALFRHHHWSRAALVYSDDKLERNCYFTLEGVHEVFQEEGLHTSIYSFDETK
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 DLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 DLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSSSYGDG
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 SWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 SWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKSSVEKQGLNMEDYVNMFVEG
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 FHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 FHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIA
370 380 390 400 410 420
430 440 450 460 470
pF1KE3 MTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCKSCG-LE
::::::::::::::::::::::::::::::::::::::::::::::::::::::: : ::
CCDS56 MTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSPCKSSGGLE
430 440 450 460 470 480
480 490 500 510 520 530
pF1KE3 ESAVTGIVVGALLGAGLLMAFYFFRKKYRITIERRTQQEESNLGKHRELREDSIRSHFSV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 ESAVTGIVVGALLGAGLLMAFYFFRKKYRITIERRTQQEESNLGKHRELREDSIRSHFSV
490 500 510 520 530 540
540
pF1KE3 A
:
CCDS56 A
>>CCDS56356.1 NPR3 gene_id:4883|Hs108|chr5 (324 aa)
initn: 1882 init1: 1882 opt: 1884 Z-score: 1618.7 bits: 308.5 E(32554): 7.7e-84
Smith-Waterman score: 1884; 97.9% identity (99.0% similar) in 292 aa overlap (249-540:33-324)
220 230 240 250 260 270
pF1KE3 GVHEVFQEEGLHTSIYSFDETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHG
:. .:.::::::::::::::::::::::
CCDS56 PSALGPWSLFPDLAPRDQEGQVLAPRRCFRRECGQNEKVVIMCASSDTIRSIMLVAHRHG
10 20 30 40 50 60
280 290 300 310 320 330
pF1KE3 MTSGDYAFFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 MTSGDYAFFNIELFNSSSYGDGSWKRGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSME
70 80 90 100 110 120
340 350 360 370 380 390
pF1KE3 VKSSVEKQGLNMEDYVNMFVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 VKSSVEKQGLNMEDYVNMFVEGFHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFE
130 140 150 160 170 180
400 410 420 430 440 450
pF1KE3 GIAGQVSIDANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 GIAGQVSIDANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLR
190 200 210 220 230 240
460 470 480 490 500 510
pF1KE3 IDENRIVEHTNSSPCKSCGLEESAVTGIVVGALLGAGLLMAFYFFRKKYRITIERRTQQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS56 IDENRIVEHTNSSPCKSCGLEESAVTGIVVGALLGAGLLMAFYFFRKKYRITIERRTQQE
250 260 270 280 290 300
520 530 540
pF1KE3 ESNLGKHRELREDSIRSHFSVA
::::::::::::::::::::::
CCDS56 ESNLGKHRELREDSIRSHFSVA
310 320
>>CCDS6590.1 NPR2 gene_id:4882|Hs108|chr9 (1047 aa)
initn: 546 init1: 272 opt: 509 Z-score: 441.7 bits: 92.4 E(32554): 2.8e-18
Smith-Waterman score: 728; 30.9% identity (60.7% similar) in 512 aa overlap (36-523:11-502)
10 20 30 40 50 60
pF1KE3 VLTFSPCVLLGWALLAGGTGGGGVGGGGGGAGIGGGRQEREALPP--QKIEVLVLLPQDD
:...:: . :: ... . :.::. .
CCDS65 MALPSLLLLVAALAGGVR-----PPGARNLTLAVVLPEHN
10 20 30
70 80 90 100 110 120
pF1KE3 -SYLFSLTRVRPAIEYALRSVEGNGTGRRLLPPGTRFQVAYEDSDCGNR-ALFSLVDRVA
:: .. :: ::. : ::. : : :: :: . .. :.. : .: ::
CCDS65 LSYAWAWPRVGPAVALA---VEALG---RALPVDLRFVSSELEGACSEYLAPLSAVD---
40 50 60 70 80
130 140 150 160 170 180
pF1KE3 AARGAKPDLILGPVCEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAY
:::.::: : : :: :::.:::: ::.:.:::.:.::. :...: :.:..:.
CCDS65 LKLYHDPDLLLGPGCVYPAASVARFASHWRLPLLTAGAVASGFSAKNDHYRTLVRTGPSA
90 100 110 120 130 140
190 200 210 220 230
pF1KE3 AKMGEMMLALFRHHHWS-RAALVYSDDKLE-RNCYFTLEGVHEVFQEEGLHTS--IYSFD
:.::....: : .:. ::::.: : . . : :::.::: :..: .: .. .:. .
CCDS65 PKLGEFVVTLHGHFNWTARAALLYLDARTDDRPHYFTIEGVFEALQGSNLSVQHQVYARE
150 160 170 180 190 200
240 250 260 270 280 290
pF1KE3 ETKDLDLEDIVRNIQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSS--
:. .. :.:. :.: .:. . .. :.: :.:...:.:::.:: ...:. :
CCDS65 PGGP---EQATHFIRANGRIVYICGPLEMLHEILLQAQRENLTNGDYVFFYLDVFGESLR
210 220 230 240 250 260
300 310 320 330 340
pF1KE3 ---SYGDGS-WK--RGDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVK-SSVEKQGL
. . : :. : .. ..:.... ..: . .::...:. .. . : :.
CCDS65 AGPTRATGRPWQDNRTREQAQALREAFQTVLVITYREPPNPEYQEFQNRLLIRAREDFGV
270 280 290 300 310 320
350 360 370 380 390 400
pF1KE3 NMEDYVNMFVEG-FHDAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSID
.. . .. : :.:.::::. .:.:... : ...:: .:... .: ..:..: : .:
CCDS65 ELGPSLMNLIAGCFYDGILLYAEVLNETIQEGGTREDGLRIVEKMQGRRYHGVTGLVVMD
330 340 350 360 370 380
410 420 430 440 450 460
pF1KE3 ANGDRYGDFSVIAMTDVEAGTQEVIGDYFGKEGR--FEMRPNVKYPWGPLKLRIDENRIV
:.:: :: . :: :...: . . : : : . . :: :: :. .
CCDS65 KNNDRETDFVLWAMGDLDSGDFQPAAHYSGAEKQIWWTGRP---IPWVKGAPPSDNPPCA
390 400 410 420 430 440
470 480 490 500 510 520
pF1KE3 EHTNSSPCKSCGLEESAVTGIVVGALLGAGLLMAFYFFRK----KYRITIERRTQQEESN
.. : . : :.... .: . . .: .::: : .. : . :: .
CCDS65 FDLDDPSCDKTPLSTLAIVALGTGITFIMFGVSSFLIFRKLMLEKELASMLWRIRWEELQ
450 460 470 480 490 500
530 540
pF1KE3 LGKHRELREDSIRSHFSVA
.:
CCDS65 FGNSERYHKGAGSRLTLSLRGSSYGSLMTAHGKYQIFANTGHFKGNVVAIKHVNKKRIEL
510 520 530 540 550 560
>>CCDS1051.1 NPR1 gene_id:4881|Hs108|chr1 (1061 aa)
initn: 688 init1: 212 opt: 478 Z-score: 415.2 bits: 87.5 E(32554): 8.3e-17
Smith-Waterman score: 796; 34.5% identity (62.6% similar) in 481 aa overlap (53-512:35-502)
30 40 50 60 70 80
pF1KE3 GTGGGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLLP-QDDSYLFSLTRVRPAIEYALR
. : :.:: . :: .: .:: ::.: ::
CCDS10 RRPAGSRLRLLLLLLLPPLLLLLRGSHAGNLTVAVVLPLANTSYPWSWARVGPAVELALA
10 20 30 40 50 60
90 100 110 120 130
pF1KE3 SVEGNGTGRRLLPPGTRFQVAYEDSDCGNRALFSLVDRVA--AARGAK----PDLILGPV
.:.. : : :: ... .:. :: : .: :: : : ..:::
CCDS10 QVKA----RPDLLPGWTVRTVLGSSE---NALGVCSDTAAPLAAVDLKWEHNPAVFLGPG
70 80 90 100 110
140 150 160 170 180 190
pF1KE3 CEYAAAPVARLASHWDLPMLSAGALAAGFQHKDSEYSHLTRVAPAYAKMGEMMLALFRHH
: ::::::.:...:: .:.:.::: : :: :: ::. ::..:.:::.:... :: :.
CCDS10 CVYAAAPVGRFTAHWRVPLLTAGAPALGFGVKD-EYALTTRAGPSYAKLGDFVAALHRRL
120 130 140 150 160 170
200 210 220 230 240 250
pF1KE3 HWSRAALVYSDDKL--ERNCYFTLEGVHEVFQEEGLHTSIYSFDETKDLDLED---IVRN
: : ::. . :..:.: .::. ... :. .. .. ..: :: ..:.
CCDS10 GWERQALMLYAYRPGDEEHCFFLVEGLFMRVRDR-LNITVDHLEFAED-DLSHYTRLLRT
180 190 200 210 220 230
260 270 280 290 300
pF1KE3 IQASERVVIMCASSDTIRSIMLVAHRHGMTSGDYAFFNIELFNSS-SYGDGS-----WKR
. . ::. .:.: :..:..::.: . :. . ::.::....:..: . :.: :.:
CCDS10 MPRKGRVIYICSSPDAFRTLMLLALEAGLCGEDYVFFHLDIFGQSLQGGQGPAPRRPWER
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE3 GDKHDFEAKQAYSSLQTVTLLRTVKPEFEKFSMEVKS-SVEKQGLNMED-YVNMFVEGFH
:: .: :.::... . .: .::. .: ..: . :. ...::: :: . .::
CCDS10 GDGQDVSARQAFQAAKIITYKDPDNPEYLEFLKQLKHLAYEQFNFTMEDGLVNTIPASFH
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE3 DAILLYVLALHEVLRAGYSKKDGGKIIQQTWNRTFEGIAGQVSIDANGDRYGDFSVIAMT
:..:::. :. :.: : . :: .: :. :::.:.:..: ..::..::: :::. :
CCDS10 DGLLLYIQAVTETLAHGGTVTDGENITQRMWNRSFQGVTGYLKIDSSGDRETDFSLWDM-
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE3 DVEAGTQEVIGDYFGKEGRFEMRPNVKYPWGPLKLRIDENRIVEHTNSSP-CKSCGLEES
: : :. .:. .: : .. . : : :: . : .: :.. :
CCDS10 DPENGAFRVVLNYNGTSQELVAVSGRKLNW-PLGYPPPDIPKCGFDNEDPACNQDHLSTL
420 430 440 450 460 470
490 500 510 520 530 540
pF1KE3 AVTGIVVGALLGAGLLMAFYFFRKKYRITIERRTQQEESNLGKHRELREDSIRSHFSVA
: ..: :.: :.:.. .:. .:... :
CCDS10 EVLALV-GSLSLLGILIVSFFIYRKMQLEKELASELWRVRWEDVEPSSLERHLRSAGSRL
480 490 500 510 520 530
CCDS10 TLSGRGSNYGSLLTTEGQFQVFAKTAYYKGNLVAVKRVNRKRIELTRKVLFELKHMRDVQ
540 550 560 570 580 590
540 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 08:59:24 2016 done: Thu Nov 3 08:59:25 2016
Total Scan time: 3.520 Total Display time: 0.050
Function used was FASTA [36.3.4 Apr, 2011]