Result of FASTA (ccds) for
pFN21AE3215
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3215, 491 aa
1>>>pF1KE3215 491 - 491 aa - 491 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.9751+/-0.00127; mu= -17.9809+/- 0.077
mean_var=693.7240+/-144.967, 0's: 0 Z-trim(117.6): 80 B-trim: 186 in 1/51
Lambda= 0.048695
statistics sampled from 18286 (18360) to 18286 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.812), E-opt: 0.2 (0.564), width: 16
Scan time: 3.290
The best scores are: opt bits E(32554)
CCDS5747.1 CBLL1 gene_id:79872|Hs108|chr7 ( 491) 3705 275.0 1.3e-73
CCDS64754.1 CBLL1 gene_id:79872|Hs108|chr7 ( 490) 3687 273.7 3.1e-73
CCDS14205.1 ZNF645 gene_id:158506|Hs108|chrX ( 425) 1321 107.5 3.1e-23
>>CCDS5747.1 CBLL1 gene_id:79872|Hs108|chr7 (491 aa)
initn: 3705 init1: 3705 opt: 3705 Z-score: 1435.1 bits: 275.0 E(32554): 1.3e-73
Smith-Waterman score: 3705; 100.0% identity (100.0% similar) in 491 aa overlap (1-491:1-491)
10 20 30 40 50 60
pF1KE3 MDHTDNELQGTNSSGSLGGLDVRRRIPIKLISKQANKAKPAPRTQRTINRMPAKAPPGDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 MDHTDNELQGTNSSGSLGGLDVRRRIPIKLISKQANKAKPAPRTQRTINRMPAKAPPGDE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EGFDYNEEERYDCKGGELFANQRRFPGHLFWDFQINILGEKDDTPVHFCDKCGLPIKIYG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 EGFDYNEEERYDCKGGELFANQRRFPGHLFWDFQINILGEKDDTPVHFCDKCGLPIKIYG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 RMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 RMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQR
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 DLQAHINHRHMRAGKPVTRASLENVHPPIAPPPTEIPERFIMPPDKHHMSHIPPKQHIMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 DLQAHINHRHMRAGKPVTRASLENVHPPIAPPPTEIPERFIMPPDKHHMSHIPPKQHIMM
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 PPPPLQHVPHEHYNQPHEDIRAPPAELSMAPPPPRSVSQETFRISTRKHSNLITVPIQDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 PPPPLQHVPHEHYNQPHEDIRAPPAELSMAPPPPRSVSQETFRISTRKHSNLITVPIQDD
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 SNSGAREPPPPAPAPAHHHPEYQGQPVVSHPHHIMPPQQHYAPPPPPPPPISHPMPHPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 SNSGAREPPPPAPAPAHHHPEYQGQPVVSHPHHIMPPQQHYAPPPPPPPPISHPMPHPPQ
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 AAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 AAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPP
370 380 390 400 410 420
430 440 450 460 470 480
pF1KE3 PHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPAPRGPPPPPRLQGPPSQTPLPGPHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS57 PHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPAPRGPPPPPRLQGPPSQTPLPGPHH
430 440 450 460 470 480
490
pF1KE3 PDQTRYRPYYQ
:::::::::::
CCDS57 PDQTRYRPYYQ
490
>>CCDS64754.1 CBLL1 gene_id:79872|Hs108|chr7 (490 aa)
initn: 3315 init1: 3315 opt: 3687 Z-score: 1428.3 bits: 273.7 E(32554): 3.1e-73
Smith-Waterman score: 3687; 99.8% identity (99.8% similar) in 491 aa overlap (1-491:1-490)
10 20 30 40 50 60
pF1KE3 MDHTDNELQGTNSSGSLGGLDVRRRIPIKLISKQANKAKPAPRTQRTINRMPAKAPPGDE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 MDHTDNELQGTNSSGSLGGLDVRRRIPIKLISKQANKAKPAPRTQRTINRMPAKAPPGDE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 EGFDYNEEERYDCKGGELFANQRRFPGHLFWDFQINILGEKDDTPVHFCDKCGLPIKIYG
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 -GFDYNEEERYDCKGGELFANQRRFPGHLFWDFQINILGEKDDTPVHFCDKCGLPIKIYG
70 80 90 100 110
130 140 150 160 170 180
pF1KE3 RMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 RMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQR
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 DLQAHINHRHMRAGKPVTRASLENVHPPIAPPPTEIPERFIMPPDKHHMSHIPPKQHIMM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 DLQAHINHRHMRAGKPVTRASLENVHPPIAPPPTEIPERFIMPPDKHHMSHIPPKQHIMM
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE3 PPPPLQHVPHEHYNQPHEDIRAPPAELSMAPPPPRSVSQETFRISTRKHSNLITVPIQDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 PPPPLQHVPHEHYNQPHEDIRAPPAELSMAPPPPRSVSQETFRISTRKHSNLITVPIQDD
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE3 SNSGAREPPPPAPAPAHHHPEYQGQPVVSHPHHIMPPQQHYAPPPPPPPPISHPMPHPPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 SNSGAREPPPPAPAPAHHHPEYQGQPVVSHPHHIMPPQQHYAPPPPPPPPISHPMPHPPQ
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE3 AAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 AAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPP
360 370 380 390 400 410
430 440 450 460 470 480
pF1KE3 PHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPAPRGPPPPPRLQGPPSQTPLPGPHH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS64 PHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPAPRGPPPPPRLQGPPSQTPLPGPHH
420 430 440 450 460 470
490
pF1KE3 PDQTRYRPYYQ
:::::::::::
CCDS64 PDQTRYRPYYQ
480 490
>>CCDS14205.1 ZNF645 gene_id:158506|Hs108|chrX (425 aa)
initn: 1574 init1: 920 opt: 1321 Z-score: 530.7 bits: 107.5 E(32554): 3.1e-23
Smith-Waterman score: 1564; 53.0% identity (71.8% similar) in 447 aa overlap (48-489:1-425)
20 30 40 50 60 70
pF1KE3 GGLDVRRRIPIKLISKQANKAKPAPRTQRTINRMPAKAPPGDEEGFDYNEEERYDCKGGE
.:.::: :..: .::.: .: :: .
CCDS14 MNKMPA----GEQE-CEYNKEGKYYSKGVK
10 20
80 90 100 110 120 130
pF1KE3 LFANQRRFPGHLFWDFQINILGEKDDTPVHFCDKCGLPIKIYGRMIPCKHVFCYDCAILH
: .....::. . :..:::.::::: :.:::::: ::::::::.:::::.::: :: :.
CCDS14 LVRKKKKIPGYRWGDIKINIIGEKDDLPIHFCDKCDLPIKIYGRIIPCKHAFCYHCANLY
30 40 50 60 70 80
140 150 160 170 180 190
pF1KE3 EKKGDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGKPV
.: : :.:: : :: ::: :::.::::::: ::::::::..:::::..:: :: : :
CCDS14 DKVGYKVCPRCRYPVLRIEAHKRGSVFMCSIVQQCKRTYLSQKSLQAHIKRRHKRARKQV
90 100 110 120 130 140
200 210 220 230 240 250
pF1KE3 TRASLENVHPPIAPPPTEI---PERFIMPPDKHHMSHIPPKQHIMMPPPPLQHVPHEHYN
: ::::.:.: :::: ::: :.:. :. :.:.:::.:: :. : .::. .:..:
CCDS14 TSASLEKVRPHIAPPQTEISDIPKRL---QDRDHLSYIPPEQHTMVSLPSVQHMLQEQHN
150 160 170 180 190 200
260 270 280 290 300 310
pF1KE3 QPHEDIRAPPAELSMAPPPPRSVSQETFRISTRKHSNLITVPIQDDSNSGAREPPPPAPA
:::.::.::: :::.. : : .. :: : ::::.:: . ::..:.:::..: ::
CCDS14 QPHKDIQAPPPELSLSLPFP--IQWETVSIFTRKHGNLTVDHIQNNSDSGAKKPTPP---
210 220 230 240 250
320 330 340 350 360 370
pF1KE3 PAHHHPEYQGQPVVSHPHHIMPPQQHYAPPPPPPPPISHPMPHPPQAAGTPHLVYSQAPP
..:: :.::.:: ::::.: .::::::: : :..: ::.::: . ::. : ::.:
CCDS14 --DYYPECQSQPAVSSPHHIIPQKQHYAPPPSPSSPVNHQMPYPPQDVVTPNSVRSQVPA
260 270 280 290 300 310
380 390 400 410 420 430
pF1KE3 PPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLPQFTE
.:.. : :.::...:: :: :: : :.:.: .. :::: : ::::::
CCDS14 --LTTT---YDPSSGYIIVKVPPDMNSPPLRAPQSQNGNPSASEFASHHYNLNILPQFTE
320 330 340 350 360 370
440 450 460 470 480 490
pF1KE3 DQGTLSPPFTQPGGMSPGIWPA-PRGPPPPPRLQGPPSQTPLPG-PHHPDQTRYRPYYQ
.: :::: ::: .:. ::: : : :: . ::: : : :: : :.: :
CCDS14 NQETLSPQFTQTDAMDHRRWPAWKRLSPCPPTRSPPPS--TLHGRSHHSHQRRHRRY
380 390 400 410 420
491 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 19:26:59 2016 done: Mon Nov 7 19:27:00 2016
Total Scan time: 3.290 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]