Result of FASTA (ccds) for
pFN21AE3192
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3192, 447 aa
1>>>pF1KE3192 447 - 447 aa - 447 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.2720+/-0.000901; mu= 12.5747+/- 0.054
mean_var=81.8759+/-16.798, 0's: 0 Z-trim(106.5): 16 B-trim: 0 in 0/50
Lambda= 0.141741
statistics sampled from 9001 (9011) to 9001 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.64), E-opt: 0.2 (0.277), width: 16
Scan time: 2.860
The best scores are: opt bits E(32554)
CCDS55023.1 FBXO9 gene_id:26268|Hs108|chr6 ( 447) 3032 629.9 1.6e-180
CCDS55022.1 FBXO9 gene_id:26268|Hs108|chr6 ( 437) 2942 611.5 5.3e-175
CCDS55024.1 FBXO9 gene_id:26268|Hs108|chr6 ( 403) 2724 566.9 1.3e-161
>>CCDS55023.1 FBXO9 gene_id:26268|Hs108|chr6 (447 aa)
initn: 3032 init1: 3032 opt: 3032 Z-score: 3354.6 bits: 629.9 E(32554): 1.6e-180
Smith-Waterman score: 3032; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447)
10 20 30 40 50 60
pF1KE3 MPDIIWVFPPQAEAEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MPDIIWVFPPQAEAEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSS
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 SNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRA
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 MQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPE
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 LESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKV
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 WGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 WGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYI
250 260 270 280 290 300
310 320 330 340 350 360
pF1KE3 RFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKE
310 320 330 340 350 360
370 380 390 400 410 420
pF1KE3 EKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVS
370 380 390 400 410 420
430 440
pF1KE3 AFEIDKMYTPLFFARVRSYTAFSERPL
:::::::::::::::::::::::::::
CCDS55 AFEIDKMYTPLFFARVRSYTAFSERPL
430 440
>>CCDS55022.1 FBXO9 gene_id:26268|Hs108|chr6 (437 aa)
initn: 2942 init1: 2942 opt: 2942 Z-score: 3255.3 bits: 611.5 E(32554): 5.3e-175
Smith-Waterman score: 2942; 100.0% identity (100.0% similar) in 436 aa overlap (12-447:2-437)
10 20 30 40 50 60
pF1KE3 MPDIIWVFPPQAEAEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSS
:::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MAEAEEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSS
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 SNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 SNLENRPCRAARGSLQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRA
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 MQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MQLVPDIEFKITYTRSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPE
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 LESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LESSQIHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKV
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE3 WGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 WGRSCIKLVPYTSWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYI
240 250 260 270 280 290
310 320 330 340 350 360
pF1KE3 RFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RFFPDGHVMMLTTPEEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKE
300 310 320 330 340 350
370 380 390 400 410 420
pF1KE3 EKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EKPLDYKYRYFRRVPVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVS
360 370 380 390 400 410
430 440
pF1KE3 AFEIDKMYTPLFFARVRSYTAFSERPL
:::::::::::::::::::::::::::
CCDS55 AFEIDKMYTPLFFARVRSYTAFSERPL
420 430
>>CCDS55024.1 FBXO9 gene_id:26268|Hs108|chr6 (403 aa)
initn: 2724 init1: 2724 opt: 2724 Z-score: 3015.0 bits: 566.9 E(32554): 1.3e-161
Smith-Waterman score: 2724; 100.0% identity (100.0% similar) in 403 aa overlap (45-447:1-403)
20 30 40 50 60 70
pF1KE3 EEDCHSDTVRADDDEENESPAETDLQAQLQMFRAQWMFELAPGVSSSNLENRPCRAARGS
::::::::::::::::::::::::::::::
CCDS55 MFRAQWMFELAPGVSSSNLENRPCRAARGS
10 20 30
80 90 100 110 120 130
pF1KE3 LQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 LQKTSADTKGKQEQAKEEKARELFLKAVEEEQNGALYEAIKFYRRAMQLVPDIEFKITYT
40 50 60 70 80 90
140 150 160 170 180 190
pF1KE3 RSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPME
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 RSPDGDGVGNSYIEDNDDDSKMADLLSYFQQQLTFQESVLKLCQPELESSQIHISVLPME
100 110 120 130 140 150
200 210 220 230 240 250
pF1KE3 VLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSW
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 VLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWRLACLKVWGRSCIKLVPYTSW
160 170 180 190 200 210
260 270 280 290 300 310
pF1KE3 REMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 REMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRAWHQVEYYRYIRFFPDGHVMMLTTP
220 230 240 250 260 270
320 330 340 350 360 370
pF1KE3 EEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EEPQSIVPRLRTRNTRTDAILLGHYRLSQDTDNQTKVFAVITKKKEEKPLDYKYRYFRRV
280 290 300 310 320 330
380 390 400 410 420 430
pF1KE3 PVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 PVQEADQSFHVGLQLCSSGHQRFNKLIWIHHSCHITYKSTGETAVSAFEIDKMYTPLFFA
340 350 360 370 380 390
440
pF1KE3 RVRSYTAFSERPL
:::::::::::::
CCDS55 RVRSYTAFSERPL
400
447 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 04:48:07 2016 done: Sun Nov 6 04:48:07 2016
Total Scan time: 2.860 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]