Result of FASTA (omim) for
pFN21AE3189
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3189, 432 aa
1>>>pF1KE3189 432 - 432 aa - 432 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 13.4268+/-0.000443; mu= -17.7544+/- 0.028
mean_var=589.1855+/-122.303, 0's: 0 Z-trim(125.4): 98 B-trim: 469 in 1/60
Lambda= 0.052838
statistics sampled from 48863 (48993) to 48863 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.821), E-opt: 0.2 (0.574), width: 16
Scan time: 11.710
The best scores are: opt bits E(85289)
XP_016876735 (OMIM: 602294) PREDICTED: hepatocyte ( 439) 613 61.0 6.9e-09
NP_004487 (OMIM: 602294) hepatocyte nuclear factor ( 472) 613 61.1 7.3e-09
NP_710141 (OMIM: 600288) hepatocyte nuclear factor ( 457) 611 60.9 7.9e-09
NP_068556 (OMIM: 600288) hepatocyte nuclear factor ( 463) 611 60.9 8e-09
NP_004465 (OMIM: 602211) forkhead box protein D2 [ ( 495) 604 60.4 1.2e-08
NP_036315 (OMIM: 607836,611539) forkhead box prote ( 478) 600 60.1 1.5e-08
NP_004464 (OMIM: 241850,602617,616534) forkhead bo ( 373) 594 59.5 1.7e-08
NP_004488 (OMIM: 602295) hepatocyte nuclear factor ( 350) 546 55.8 2e-07
NP_004463 (OMIM: 601091) forkhead box protein D1 [ ( 465) 544 55.8 2.8e-07
NP_005241 (OMIM: 603252) forkhead box protein L1 [ ( 345) 516 53.5 9.8e-07
NP_005242 (OMIM: 153400,602402) forkhead box prote ( 501) 520 54.0 1e-06
NP_036318 (OMIM: 107250,601094,610256) forkhead bo ( 319) 511 53.1 1.2e-06
NP_036316 (OMIM: 611084) forkhead box protein D4-l ( 408) 492 51.8 3.9e-06
NP_001444 (OMIM: 601090,601631,602482) forkhead bo ( 553) 495 52.1 4.2e-06
NP_004109 (OMIM: 602939) forkhead box protein S1 [ ( 330) 486 51.2 4.6e-06
NP_954714 (OMIM: 611085) forkhead box protein D4-l ( 416) 478 50.7 8.3e-06
NP_954586 (OMIM: 611086) forkhead box protein D4-l ( 417) 476 50.6 9.3e-06
NP_997188 (OMIM: 601092) forkhead box protein D4 [ ( 439) 462 49.5 2e-05
NP_075555 (OMIM: 110100,605597,608996) forkhead bo ( 376) 459 49.2 2.1e-05
NP_036320 (OMIM: 274600,600791,601093) forkhead bo ( 378) 452 48.7 3.1e-05
NP_001129121 (OMIM: 612351) forkhead box protein I ( 420) 451 48.7 3.5e-05
XP_011513493 (OMIM: 616302) PREDICTED: forkhead bo ( 570) 437 47.7 9.1e-05
NP_001032242 (OMIM: 616302) forkhead box protein K ( 733) 437 47.8 0.00011
NP_001442 (OMIM: 265380,601089) forkhead box prote ( 379) 420 46.2 0.00017
NP_001443 (OMIM: 603250) forkhead box protein F2 [ ( 444) 422 46.5 0.00017
NP_005240 (OMIM: 164874,613454) forkhead box prote ( 489) 418 46.2 0.00022
NP_004505 (OMIM: 147685) forkhead box protein K2 [ ( 660) 381 43.5 0.0019
NP_001445 (OMIM: 602291) forkhead box protein J1 [ ( 421) 366 42.2 0.0031
NP_150285 (OMIM: 612788) forkhead box protein Q1 [ ( 403) 362 41.9 0.0037
>>XP_016876735 (OMIM: 602294) PREDICTED: hepatocyte nucl (439 aa)
initn: 610 init1: 553 opt: 613 Z-score: 280.5 bits: 61.0 E(85289): 6.9e-09
Smith-Waterman score: 639; 38.4% identity (58.4% similar) in 305 aa overlap (6-306:130-422)
10 20 30
pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLP
: :: ::::::::: .::::.. :::
XP_016 AMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKPPYSYISLITMAIQQAPSKMLT
100 110 120 130 140 150
40 50 60 70 80 90
pF1KE3 LSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGD
::.::..::. :::::.. ::::::.::.:::::::.:. : ::.:::::.:.:::: :.
XP_016 LSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGN
160 170 180 190 200 210
100 110 120 130 140 150
pF1KE3 MFENGSFLRRRKRFKVLRADHTHLHAGSTKSAPGA--GPGGHLHPHHHHHPHHHHHHHAA
::::: .:::.:::: . . .:: ... :: :: .. : .: : .
XP_016 MFENGCYLRRQKRFKCEKQPGAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSPLHRG
220 230 240 250 260 270
160 170 180 190 200 210
pF1KE3 AHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSH
.: . . : : : : . : . :: .: . : ... : :
XP_016 VHGKTGQLEGAPAPGPAASPQTLDH----SGATATGGASELKT-----PASSTAPPISSG
280 290 300 310 320 330
220 230 240 250 260 270
pF1KE3 PGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFKHPF-AI
:: . :.: :. : . : : .:. : :... . ..: . : : :
XP_016 PGAL---ASVPASHPAHGLAPHESQLHLKGDPHYSFNHPFSINNLMSSSEQQHKLDFKAY
340 350 360 370 380
280 290 300 310 320 330
pF1KE3 ENIIGRDYKGVLQAGGLPLASVMHHLGYPV-PGQLGNVVSSVWPHVGVMDSVAAAAAAAA
:. . . : ..:::.:. :. :. :
XP_016 EQALQYSPYGSTLPASLPLGSASVTTRSPIEPSALEPAYYQGVYSRPVLNTS
390 400 410 420 430
340 350 360 370 380 390
pF1KE3 AAGVPVGPEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQP
>>NP_004487 (OMIM: 602294) hepatocyte nuclear factor 3-a (472 aa)
initn: 610 init1: 553 opt: 613 Z-score: 280.1 bits: 61.1 E(85289): 7.3e-09
Smith-Waterman score: 639; 38.4% identity (58.4% similar) in 305 aa overlap (6-306:163-455)
10 20 30
pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLP
: :: ::::::::: .::::.. :::
NP_004 AMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKPPYSYISLITMAIQQAPSKMLT
140 150 160 170 180 190
40 50 60 70 80 90
pF1KE3 LSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGD
::.::..::. :::::.. ::::::.::.:::::::.:. : ::.:::::.:.:::: :.
NP_004 LSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGN
200 210 220 230 240 250
100 110 120 130 140 150
pF1KE3 MFENGSFLRRRKRFKVLRADHTHLHAGSTKSAPGA--GPGGHLHPHHHHHPHHHHHHHAA
::::: .:::.:::: . . .:: ... :: :: .. : .: : .
NP_004 MFENGCYLRRQKRFKCEKQPGAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSPLHRG
260 270 280 290 300 310
160 170 180 190 200 210
pF1KE3 AHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSH
.: . . : : : : . : . :: .: . : ... : :
NP_004 VHGKTGQLEGAPAPGPAASPQTLDH----SGATATGGASELKT-----PASSTAPPISSG
320 330 340 350 360
220 230 240 250 260 270
pF1KE3 PGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFKHPF-AI
:: . :.: :. : . : : .:. : :... . ..: . : : :
NP_004 PGAL---ASVPASHPAHGLAPHESQLHLKGDPHYSFNHPFSINNLMSSSEQQHKLDFKAY
370 380 390 400 410 420
280 290 300 310 320 330
pF1KE3 ENIIGRDYKGVLQAGGLPLASVMHHLGYPV-PGQLGNVVSSVWPHVGVMDSVAAAAAAAA
:. . . : ..:::.:. :. :. :
NP_004 EQALQYSPYGSTLPASLPLGSASVTTRSPIEPSALEPAYYQGVYSRPVLNTS
430 440 450 460 470
340 350 360 370 380 390
pF1KE3 AAGVPVGPEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQP
>>NP_710141 (OMIM: 600288) hepatocyte nuclear factor 3-b (457 aa)
initn: 690 init1: 567 opt: 611 Z-score: 279.5 bits: 60.9 E(85289): 7.9e-09
Smith-Waterman score: 647; 43.8% identity (62.7% similar) in 233 aa overlap (2-214:148-375)
10 20 30
pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAE
:. . ::. ::::::::: .::::.: .
NP_710 AGAMGGLAPYANMNSMSPMYGQAGLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPN
120 130 140 150 160 170
40 50 60 70 80 90
pF1KE3 KMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHP
::: ::.::..::. ::.::.. ::::::.::.:::::::.:.:: ::.:::::::.:::
NP_710 KMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHP
180 190 200 210 220 230
100 110 120 130
pF1KE3 DCGDMFENGSFLRRRKRFKVLRADHTHLHAGST----KSAPGA-----------GPG---
: :.::::: .:::.:::: . . ::.. :.: :: ::.
NP_710 DSGNMFENGCYLRRQKRFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASET
240 250 260 270 280 290
140 150 160 170 180 190
pF1KE3 --GHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPP
: :: : ..:.. . .. . :: : : : . .:: . :
NP_710 PAGTESPHSSASPCQEHKRGGLGELKGTPAAALSPPEPAPSPGQ-----QQQAAAHLLGP
300 310 320 330 340 350
200 210 220 230 240 250
pF1KE3 PHLPSQPPQQPPQQSQPQQPSHPGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGS
:: :. ::. . . .::
NP_710 PHHPGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYP
360 370 380 390 400 410
>>NP_068556 (OMIM: 600288) hepatocyte nuclear factor 3-b (463 aa)
initn: 737 init1: 567 opt: 611 Z-score: 279.4 bits: 60.9 E(85289): 8e-09
Smith-Waterman score: 647; 43.8% identity (62.7% similar) in 233 aa overlap (2-214:154-381)
10 20 30
pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAE
:. . ::. ::::::::: .::::.: .
NP_068 AGAMGGLAPYANMNSMSPMYGQAGLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPN
130 140 150 160 170 180
40 50 60 70 80 90
pF1KE3 KMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHP
::: ::.::..::. ::.::.. ::::::.::.:::::::.:.:: ::.:::::::.:::
NP_068 KMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHP
190 200 210 220 230 240
100 110 120 130
pF1KE3 DCGDMFENGSFLRRRKRFKVLRADHTHLHAGST----KSAPGA-----------GPG---
: :.::::: .:::.:::: . . ::.. :.: :: ::.
NP_068 DSGNMFENGCYLRRQKRFKCEKQLALKEAAGAAGSGKKAAAGAQASQAQLGEAAGPASET
250 260 270 280 290 300
140 150 160 170 180 190
pF1KE3 --GHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPP
: :: : ..:.. . .. . :: : : : . .:: . :
NP_068 PAGTESPHSSASPCQEHKRGGLGELKGTPAAALSPPEPAPSPGQ-----QQQAAAHLLGP
310 320 330 340 350
200 210 220 230 240 250
pF1KE3 PHLPSQPPQQPPQQSQPQQPSHPGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGS
:: :. ::. . . .::
NP_068 PHHPGLPPEAHLKPEHHYAFNHPFSINNLMSSEQQHHHSHHHHQPHKMDLKAYEQVMHYP
360 370 380 390 400 410
>>NP_004465 (OMIM: 602211) forkhead box protein D2 [Homo (495 aa)
initn: 501 init1: 501 opt: 604 Z-score: 276.2 bits: 60.4 E(85289): 1.2e-08
Smith-Waterman score: 608; 37.4% identity (56.3% similar) in 318 aa overlap (2-287:115-429)
10 20 30
pF1KE3 MPRPGKSSYSDQ-KPPYSYISLTAMAIQHSA
: : .. : :::::::.: .::: .:
NP_004 LASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSP
90 100 110 120 130 140
40 50 60 70 80 90
pF1KE3 EKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALH
.: : ::.: .:: :::::::. ::::.:::::.::::.::::.: .::::..:.:
NP_004 KKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD
150 160 170 180 190 200
100 110 120 130 140
pF1KE3 PDCGDMFENGSFLRRRKRFKV--LRADHTHLHAGST----KSAPGAGPGGHLHPHHHHHP
:. .:::.:::::::::::: : : : : .: .:: : . : .
NP_004 PESADMFDNGSFLRRRKRFKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYG
210 220 230 240 250 260
150 160 170 180 190 200
pF1KE3 HHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAP---QPPPHLPSQPPQQ
. . . : . :: : : : : :: . : .:: . :: . ::
NP_004 AYGYGYGLALPAYGA--PPPGPAPHPHPHPH-AFAFAAAAAAAPCQLSVPPGRAAAPPPG
270 280 290 300 310 320
210 220 230 240
pF1KE3 PPQQS-----------QPQQPSHPGK----------MQEAAAVAAAAAAAAAAAVGSVGR
:: : : . : :: . . : : ::. . :.:...
NP_004 PPTASVFAGAGSAPAPAPASGSGPGPGPAGLPAFLGAELGCAKAFYAASLSPPAAGTAAG
330 340 350 360 370 380
250 260 270 280 290
pF1KE3 L-SQFPPYGLGSAAAAAAAAAASTSGFKHPFAIENIIGRDYKGVLQAGGLPLASVMHHLG
: . . :: . :...:..... .: . :.:..:.:. :. :
NP_004 LPTALLRQGLKTDAGGGAGGGGAGAGQRPSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAA
390 400 410 420 430 440
300 310 320 330 340 350
pF1KE3 YPVPGQLGNVVSSVWPHVGVMDSVAAAAAAAAAAGVPVGPEYGAFGVPVKSLCHSASQSL
NP_004 AAGPGGQAQVLAMLTAPALAPVAGHIRLSHPGDALLSSGSRFASKVAGLSGCHF
450 460 470 480 490
>>NP_036315 (OMIM: 607836,611539) forkhead box protein D (478 aa)
initn: 526 init1: 488 opt: 600 Z-score: 274.7 bits: 60.1 E(85289): 1.5e-08
Smith-Waterman score: 620; 37.5% identity (57.9% similar) in 363 aa overlap (4-336:132-476)
10 20 30
pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKM
:.: . : :::::::.: .::: .: .:
NP_036 DGCKGGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKK
110 120 130 140 150 160
40 50 60 70 80 90
pF1KE3 LPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDC
: :: : .:: .:::::::. ::::.:::::.::::.::::.: .::::..:.: :.
NP_036 LTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQS
170 180 190 200 210 220
100 110 120 130 140
pF1KE3 GDMFENGSFLRRRKRFKVLRADH----THLHAGSTKSAPGAGPGGHLHPHHHHHPHHHHH
:::.:::::::::::: . .: : : : . :. .: :. .:. :
NP_036 EDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYG--RPYGLHP
230 240 250 260 270
150 160 170 180 190 200
pF1KE3 HHAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQP-
::. . : : ..: . ::.:: :: .: : . ...
NP_036 AAAAGAYSH------PAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAF
280 290 300 310 320 330
210 220 230 240 250
pF1KE3 QQPSHPG-KMQEAAAVAAAAAAAAAAAVGSVGRLSQFPP-----------YGLGSAA---
. :: ..: . ::::::..:.:.:... : . : : : ::
NP_036 GSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSARPSFSIENIIGGGPAAPGG
340 350 360 370 380 390
260 270 280 290 300
pF1KE3 -AAAAAAAASTSGFKHPFAIENII---GRDYKGVLQAGGLPL------ASVMHHLGYPVP
:..:..:..:.: . .... : ...:.: :: :.. :. :.
NP_036 SAVGAGVAGGTGGSGGGSTAQSFLRPPGTVQSAALMATHQPLSLSRTTATIAPILSVPLS
400 410 420 430 440 450
310 320 330 340 350 360
pF1KE3 GQLGNVVSSVWPHVGVMDSVAAAAAAAAAAGVPVGPEYGAFGVPVKSLCHSASQSLPAMP
::. . : . :.:::::::: : :
NP_036 GQF------LQPAA----SAAAAAAAAAQAKWPAQ
460 470
370 380 390 400 410 420
pF1KE3 VPIKPTPALPPVSALQPGLTVPAASQQPPAPSTVCSAAAASPVASLLEPTAPTSAESKGG
>>NP_004464 (OMIM: 241850,602617,616534) forkhead box pr (373 aa)
initn: 575 init1: 497 opt: 594 Z-score: 273.6 bits: 59.5 E(85289): 1.7e-08
Smith-Waterman score: 603; 37.9% identity (57.7% similar) in 338 aa overlap (13-338:53-365)
10 20 30 40
pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKF
:::::::.: :::: :. :. : :. ::::
NP_004 GETAAGAGVPGEATGRGAGGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKF
30 40 50 60 70 80
50 60 70 80 90 100
pF1KE3 IMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSF
: ::::.::.. ..::::.::::..::::.::::. .::::..::: :. ::::.:::
NP_004 ITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSF
90 100 110 120 130 140
110 120 130 140 150
pF1KE3 LRRRKRFKVLRAD------HTHLHAGSTKSAPGAGPGGHLHPHHHHHPHHHHHHHAAAHH
:::::::: :.: . : :... .: .:. .. . : : . . .:..
NP_004 LRRRKRFK--RSDLSTYPAYMHDAAAAAAAAAAAAAAAAIFPGAV--PAARPPYPGAVYA
150 160 170 180 190
160 170 180 190 200 210
pF1KE3 HHHHHPPQ---PPP---PPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQ
. ::. ::: : : : : . . : .:. : :: : . :
NP_004 GYA--PPSLAAPPPVYYPAASPGPCRVFGLVPERPLSPELGPA-PSGPGGSCAFASAGAP
200 210 220 230 240 250
220 230 240 250 260 270
pF1KE3 PSHPGKMQEAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFKHPF
. : .: :. ..: : .: :.. .: . .: : ::: :::. : : :
NP_004 ATTTG-YQPAGCTGARPANPSAYAAAYAGPDGAYPQ-GAGSAIFAAAGRLA---GPASPP
260 270 280 290 300 310
280 290 300 310 320 330
pF1KE3 AIENIIGRDYKGVLQAGGLPLASVMHHLGYPVPGQLGNVVSSVWPHVGVMDSVAAAAAAA
: : : ..::. ... : :::.: . . : . . :.: :
NP_004 A-----G----G--SSGGV--ETTVDFYGRTSPGQFGALGACYNPGGQLGGASAGAYHAR
320 330 340 350
340 350 360 370 380 390
pF1KE3 AAAGVPVGPEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQ
::. : :
NP_004 HAAAYPGGIDRFVSAM
360 370
>>NP_004488 (OMIM: 602295) hepatocyte nuclear factor 3-g (350 aa)
initn: 711 init1: 543 opt: 546 Z-score: 254.2 bits: 55.8 E(85289): 2e-07
Smith-Waterman score: 576; 50.6% identity (69.2% similar) in 172 aa overlap (1-172:105-260)
10 20 30
pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSA
::. . . ::::::::: .::::..
NP_004 GPTFPGLGVSGGSSSSGYGAPGPGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAP
80 90 100 110 120 130
40 50 60 70 80 90
pF1KE3 EKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALH
::: ::.::..::. ::::::. ::::::.::.:::::::.:. : ::.:::::.::::
NP_004 GKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALH
140 150 160 170 180 190
100 110 120 130 140 150
pF1KE3 PDCGDMFENGSFLRRRKRFKVLRADHTHLHAGSTKSAPGAGPGGHLHPHHHHHPHHHHHH
:. :.::::: .:::.::::. . . ...: . :.: .. :
NP_004 PSSGNMFENGCYLRRQKRFKLEEKVKKGGSGAATTTRNGTGSAASTTT-----P------
200 210 220 230 240
160 170 180 190 200 210
pF1KE3 HAAAHHHHHHHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQ
::. ::::::: : :
NP_004 -AATVTS----PPQPPPPAPEPEAQGGEDVGALDCGSPASSTPYFTGLELPGELKLDAPY
250 260 270 280 290
>>NP_004463 (OMIM: 601091) forkhead box protein D1 [Homo (465 aa)
initn: 631 init1: 482 opt: 544 Z-score: 251.8 bits: 55.8 E(85289): 2.8e-07
Smith-Waterman score: 631; 36.9% identity (52.9% similar) in 420 aa overlap (13-428:125-455)
10 20 30 40
pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKF
:::::::.: .::: .: .: : ::.: .:
NP_004 AAGAGAGGGGGGGGAGGGGSAGSGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEF
100 110 120 130 140 150
50 60 70 80 90 100
pF1KE3 IMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSF
: :::::::. ::::.:::::.::::.::::.: .::::..:.: :. .:::.::::
NP_004 ISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSF
160 170 180 190 200 210
110 120 130 140 150
pF1KE3 LRRRKRFKVLRADHTHLHAGSTKSA--PGAGP-GGHLHPHHHHHPHHHHHHHAAAHHHHH
:::::::: : .:....: ::: :: : :::
NP_004 LRRRKRFK--RQPLLPPNAAAAESLLLRGAGAAGGAGDPAA-----------AAALF---
220 230 240 250
160 170 180 190 200 210
pF1KE3 HHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSHPGKMQE
:: :::::: : .: . . :: ::
NP_004 -------PPAPPPPPHAYGY-------GPYGCGYGLQLPPYAPP----------------
260 270 280
220 230 240 250 260 270
pF1KE3 AAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFK-HPFAIENIIGR
.: ::::::::::: . ::.: ::: : .. :.. ::.. . :
NP_004 SALFAAAAAAAAAAAFHPHSPPPPPPPHG------AAAELARTAFGYRPHPLGAA-LPGP
290 300 310 320 330 340
280 290 300 310 320 330
pF1KE3 DYKGVLQAGGLPLASVMHHLGYPVPGQLGNVVSSVWPHVGVMDSVAAAAAAAAAAGVPVG
.. .::: : ::.. . . . . .: : . .::::::: ::
NP_004 LPASAAKAGG-PGASALARSPFSIESIIG----------GSLGPAAAAAAAAQAA-----
350 360 370 380
340 350 360 370 380 390
pF1KE3 PEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQPPAPSTVC
.:.:. :. : :. : ::. . . : . :. : : :
NP_004 ---------------AAAQASPS-PSPV----AAPPAPGSSGGGCAAQAAVGPAAALTRS
390 400 410 420
400 410 420 430
pF1KE3 SAAAASPVASLLEPTAPTSAESKGGSLHSVLVHS
.:::. .:: . .: .. .: .: ::
NP_004 LVAAAAAAASSVSSSAALGTLHQGTALSSVENFTARISNC
430 440 450 460
>>NP_005241 (OMIM: 603252) forkhead box protein L1 [Homo (345 aa)
initn: 527 init1: 469 opt: 516 Z-score: 241.9 bits: 53.5 E(85289): 9.8e-07
Smith-Waterman score: 529; 36.1% identity (57.4% similar) in 305 aa overlap (10-313:46-297)
10 20 30
pF1KE3 MPRPGKSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDI
. ::::::::.: ::::: . :. . :. :
NP_005 PMLYLYGPERPGLPLAFAPAAALAASGRAETPQKPPYSYIALIAMAIQDAPEQRVTLNGI
20 30 40 50 60 70
40 50 60 70 80 90
pF1KE3 YKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFEN
:.:::.:::.:... : ::::.:::::.::::.:.::. .:::::.:.: : : :::::
NP_005 YQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFEN
80 90 100 110 120 130
100 110 120 130 140 150
pF1KE3 GSFLRRRKRFKVLRADHTHLHAGSTKSAPGAGPGGHLHPHHHHHPHHHHHHHAAAHHHHH
:.. ::::: : :::. :. .. :. . :...: .
NP_005 GNY-RRRKR------------------KPKPGPGA---PEAKR-PRAETHQRSAEAQ---
140 150 160
160 170 180 190 200 210
pF1KE3 HHPPQPPPPPPPPPPHMVHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQPQQPSH-PGKMQ
:. : . . : :..:.: :: :: : : :: .
NP_005 ---PEAGSGAGGSGPAISRL--QAAPAGPSPLLDGPS-PPA----------PLHWPGTAS
170 180 190 200 210
220 230 240 250 260 270
pF1KE3 EAAAVAAAAAAAAAAAVGSVGRLSQFPPYGLGSAAAAAAAAAASTSGFKHPFAIENIIGR
.. :: .:::.:::...: .. : :: :. .. ..: .. :.:..:..
NP_005 PNEDAGDAAQGAAAVAVGQAARTGDGP----GSPLRPASRSSPKSSDKSKSFSIDSILA-
220 230 240 250 260
280 290 300 310 320 330
pF1KE3 DYKGVLQAGGLPLASVMHHLGYPVPGQLGNVVSSVWPHVGVMDSVAAAAAAAAAAGVPVG
.: .: : :: :: : . .:.
NP_005 GKQGQKPPSGDEL------LGGAKPGPGGRLGASLLAASSSLRPPFNASLMLDPHVQGGF
270 280 290 300 310 320
340 350 360 370 380 390
pF1KE3 PEYGAFGVPVKSLCHSASQSLPAMPVPIKPTPALPPVSALQPGLTVPAASQQPPAPSTVC
NP_005 YQLGIPFLSYFPLQVPDTVLHFQ
330 340
432 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Tue Nov 8 02:09:08 2016 done: Tue Nov 8 02:09:10 2016
Total Scan time: 11.710 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]