FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3155, 373 aa
  1>>>pF1KE3155 373 - 373 aa - 373 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0749+/-0.00104; mu= 12.0096+/- 0.063
 mean_var=61.8609+/-12.407, 0's: 0 Z-trim(102.8): 20  B-trim: 0 in 0/49
 Lambda= 0.163067
 statistics sampled from 7101 (7106) to 7101 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.586), E-opt: 0.2 (0.218), width:  16
 Scan time:  2.550

The best scores are:                                      opt bits E(32554)
CCDS42063.1 HYKK gene_id:123688|Hs108|chr15        ( 373) 2437 582.1 2.6e-166
CCDS45318.1 HYKK gene_id:123688|Hs108|chr15        ( 220) 1420 342.9 1.6e-94


>>CCDS42063.1 HYKK gene_id:123688|Hs108|chr15             (373 aa)
 initn: 2437 init1: 2437 opt: 2437  Z-score: 3099.3  bits: 582.1 E(32554): 2.6e-166
Smith-Waterman score: 2437; 100.0% identity (100.0% similar) in 373 aa overlap (1-373:1-373)

               10        20        30        40        50        60
pF1KE3 MSSGNYQQSEALSKPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MSSGNYQQSEALSKPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 EYVLKISNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EYVLKISNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 YLVRLLTYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 YLVRLLTYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 VPLLEKYLYALGQNRNREIVEHVIHLFKEEVMTKLSHFRECINHGDLNDHNILIESSKSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 VPLLEKYLYALGQNRNREIVEHVIHLFKEEVMTKLSHFRECINHGDLNDHNILIESSKSA
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 SGNAEYQVSGILDFGDMSYGYYVFEVAITIMYMMIESKSPIQVGGHVLAGFESITPLTAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SGNAEYQVSGILDFGDMSYGYYVFEVAITIMYMMIESKSPIQVGGHVLAGFESITPLTAV
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 EKGALFLLVCSRFCQSLVMAAYSCQLYPENKDYLMVTAKTGWKHLQQMFDMGQKAVEEIW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EKGALFLLVCSRFCQSLVMAAYSCQLYPENKDYLMVTAKTGWKHLQQMFDMGQKAVEEIW
              310       320       330       340       350       360

              370   
pF1KE3 FETAKSYESGISM
       :::::::::::::
CCDS42 FETAKSYESGISM
              370   

>>CCDS45318.1 HYKK gene_id:123688|Hs108|chr15             (220 aa)
 initn: 1420 init1: 1420 opt: 1420  Z-score: 1810.4  bits: 342.9 E(32554): 1.6e-94
Smith-Waterman score: 1420; 100.0% identity (100.0% similar) in 220 aa overlap (1-220:1-220)

               10        20        30        40        50        60
pF1KE3 MSSGNYQQSEALSKPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MSSGNYQQSEALSKPTFSEEQASALVESVFGLKVSKVRPLPSYDDQNFHVYVSKTKDGPT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 EYVLKISNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EYVLKISNTKASKNPDLIEVQNHIIMFLKAAGFPTASVCHTKGDNTASLVSVDSGSEIKS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 YLVRLLTYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 YLVRLLTYLPGRPIAELPVSPQLLYEIGKLAAKLDKTLQRFHHPKLSSLHRENFIWNLKN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 VPLLEKYLYALGQNRNREIVEHVIHLFKEEVMTKLSHFRECINHGDLNDHNILIESSKSA
       ::::::::::::::::::::::::::::::::::::::::                    
CCDS45 VPLLEKYLYALGQNRNREIVEHVIHLFKEEVMTKLSHFRE                    
              190       200       210       220                    

              250       260       270       280       290       300
pF1KE3 SGNAEYQVSGILDFGDMSYGYYVFEVAITIMYMMIESKSPIQVGGHVLAGFESITPLTAV




373 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 18:15:54 2016 done: Thu Nov  3 18:15:55 2016
 Total Scan time:  2.550 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]