Result of FASTA (ccds) for
pFN21AE3128
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3128, 318 aa
1>>>pF1KE3128 318 - 318 aa - 318 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 6.1577+/-0.00113; mu= 9.7523+/- 0.068
mean_var=54.5989+/-10.856, 0's: 0 Z-trim(100.7): 27 B-trim: 0 in 0/49
Lambda= 0.173573
statistics sampled from 6199 (6213) to 6199 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.557), E-opt: 0.2 (0.191), width: 16
Scan time: 2.080
The best scores are: opt bits E(32554)
CCDS14150.1 PRPS2 gene_id:5634|Hs108|chrX ( 318) 2051 522.1 2.2e-148
CCDS43918.1 PRPS2 gene_id:5634|Hs108|chrX ( 321) 2035 518.1 3.6e-147
CCDS14529.1 PRPS1 gene_id:5631|Hs108|chrX ( 318) 1990 506.8 8.8e-144
CCDS47552.1 PRPS1L1 gene_id:221823|Hs108|chr7 ( 318) 1896 483.3 1.1e-136
CCDS76007.1 PRPS1 gene_id:5631|Hs108|chrX ( 114) 717 188.2 2.7e-48
CCDS58525.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 320) 607 160.5 1.6e-39
CCDS58527.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 283) 375 102.4 4.3e-22
CCDS58526.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 329) 375 102.4 5e-22
CCDS11200.1 PRPSAP2 gene_id:5636|Hs108|chr17 ( 369) 375 102.4 5.7e-22
CCDS82209.1 PRPSAP1 gene_id:5635|Hs108|chr17 ( 282) 352 96.7 2.3e-20
CCDS11743.2 PRPSAP1 gene_id:5635|Hs108|chr17 ( 385) 352 96.6 3.2e-20
>>CCDS14150.1 PRPS2 gene_id:5634|Hs108|chrX (318 aa)
initn: 2051 init1: 2051 opt: 2051 Z-score: 2777.4 bits: 522.1 E(32554): 2.2e-148
Smith-Waterman score: 2051; 100.0% identity (100.0% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE3 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAI
250 260 270 280 290 300
310
pF1KE3 RRTHNGESVSYLFSHVPL
::::::::::::::::::
CCDS14 RRTHNGESVSYLFSHVPL
310
>>CCDS43918.1 PRPS2 gene_id:5634|Hs108|chrX (321 aa)
initn: 1409 init1: 1409 opt: 2035 Z-score: 2755.7 bits: 518.1 E(32554): 3.6e-147
Smith-Waterman score: 2035; 99.1% identity (99.1% similar) in 321 aa overlap (1-318:1-321)
10 20 30 40 50 60
pF1KE3 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
10 20 30 40 50 60
70 80 90 100 110
pF1KE3 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDK---SRAPISAKLVANMLS
:::::::::::::::::::::::::::::::::::::::::: :::::::::::::::
CCDS43 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKVGESRAPISAKLVANMLS
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE3 VTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 VTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLL
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE3 SAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS43 SAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILA
250 260 270 280 290 300
300 310
pF1KE3 EAIRRTHNGESVSYLFSHVPL
:::::::::::::::::::::
CCDS43 EAIRRTHNGESVSYLFSHVPL
310 320
>>CCDS14529.1 PRPS1 gene_id:5631|Hs108|chrX (318 aa)
initn: 1990 init1: 1990 opt: 1990 Z-score: 2694.9 bits: 506.8 E(32554): 8.8e-144
Smith-Waterman score: 1990; 95.3% identity (98.7% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE3 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
:::: .:::::::::::..::::::::::::::::::::: ::::::::::::::.::::
CCDS14 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
:::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::
CCDS14 GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTS
::::::::::::::::::::::::::::::::.::::::.::.:: ::::::::::::::
CCDS14 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
:::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 IADRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAI
::.::::::::::::::::::::: :::::::::::::::::::.:::::::::::::::
CCDS14 ATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAI
250 260 270 280 290 300
310
pF1KE3 RRTHNGESVSYLFSHVPL
::::::::::::::::::
CCDS14 RRTHNGESVSYLFSHVPL
310
>>CCDS47552.1 PRPS1L1 gene_id:221823|Hs108|chr7 (318 aa)
initn: 1896 init1: 1896 opt: 1896 Z-score: 2567.6 bits: 483.3 E(32554): 1.1e-136
Smith-Waterman score: 1896; 91.2% identity (97.5% similar) in 318 aa overlap (1-318:1-318)
10 20 30 40 50 60
pF1KE3 MPNIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGC
:::: .:::::::::::..::::::::::::::::::::: ::: ::::::::::.::::
CCDS47 MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGC
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 GEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
:::::.:::::::::::::::.::::::::::::::::::::::.::::::::::::.::
CCDS47 GEINDSLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRSPISAKLVANMLSIAG
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 ADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTS
:::::::::::::::::::::::::::::.::.:::::: ::::::::::::::::::::
CCDS47 ADHIITMDLHASQIQGFFDIPVDNLYAEPTVLKWIRENIPEWKNCIIVSPDAGGAKRVTS
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 IADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
:::.:::.::::::::::::::: .::::::.:::::::::::::: ::: :::::::::
CCDS47 IADQLNVDFALIHKERKKANEVDCIVLVGDVNDRVAILVDDMADTCVTICLAADKLLSAG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAI
::.:::::::::::::::::::.: ::::::::::::..:::::.::.::::::::::::
CCDS47 ATRVYAILTHGIFSGPAISRINTACFEAVVVTNTIPQDEKMKHCSKIRVIDISMILAEAI
250 260 270 280 290 300
310
pF1KE3 RRTHNGESVSYLFSHVPL
::::::::::::::::::
CCDS47 RRTHNGESVSYLFSHVPL
310
>>CCDS76007.1 PRPS1 gene_id:5631|Hs108|chrX (114 aa)
initn: 717 init1: 717 opt: 717 Z-score: 980.6 bits: 188.2 E(32554): 2.7e-48
Smith-Waterman score: 717; 97.4% identity (99.1% similar) in 114 aa overlap (205-318:1-114)
180 190 200 210 220 230
pF1KE3 AKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAAD
::::::::::::::::::::::::::::::
CCDS76 MVLVGDVKDRVAILVDDMADTCGTICHAAD
10 20 30
240 250 260 270 280 290
pF1KE3 KLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISM
::::::::.::::::::::::::::::::: :::::::::::::::::::.:::::::::
CCDS76 KLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISM
40 50 60 70 80 90
300 310
pF1KE3 ILAEAIRRTHNGESVSYLFSHVPL
::::::::::::::::::::::::
CCDS76 ILAEAIRRTHNGESVSYLFSHVPL
100 110
>>CCDS58525.1 PRPSAP2 gene_id:5636|Hs108|chr17 (320 aa)
initn: 836 init1: 316 opt: 607 Z-score: 823.1 bits: 160.5 E(32554): 1.6e-39
Smith-Waterman score: 762; 45.3% identity (71.1% similar) in 318 aa overlap (4-318:20-318)
10 20 30 40
pF1KE3 MPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETS
.::::..:.. .::...:.:::.:.::: . . :.::
CCDS58 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 VEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKD
:.: :::::.::.:::. ..: ..::::::. ::: . .. . .::: :::..: :
CCDS58 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 KSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAE
: :. : .::.:.:. :: :.:::::: ..:::::.:::::: : : .::.:.:.: .
CCDS58 K-RGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPD
130 140 150 160 170
170 180 190 200 210 220
pF1KE3 WKNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDD
..: .::. . ..:::. :.:.:: . .:.:: : . : : : :: : .
CCDS58 YRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDA-ESD---LV-DGRHS-----PP
180 190 200 210 220
230 240 250 260 270 280
pF1KE3 MADTCGTICHAADKLLSAGATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKM
:. . ..: : . .. . : . : .: :: :. .::::::::.: .
CCDS58 MVRSVAAI-HPSLEIPMLIPKEKPPITVVGDVGG----RI---AIIVVVVTNTIPHEVQK
230 240 250 260 270 280
290 300 310
pF1KE3 KHCTKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL
.: ::...::::::.::::: :::::.:::: .. :
CCDS58 LQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD
290 300 310 320
>>CCDS58527.1 PRPSAP2 gene_id:5636|Hs108|chr17 (283 aa)
initn: 770 init1: 368 opt: 375 Z-score: 510.2 bits: 102.4 E(32554): 4.3e-22
Smith-Waterman score: 719; 44.3% identity (68.8% similar) in 282 aa overlap (68-318:1-281)
40 50 60 70 80 90
pF1KE3 QETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQ
::::::. ::: . .. . .::: :::..:
CCDS58 MELLIMVYACKTSCAKSIIGVIPYFPYSKQ
10 20 30
100 110 120 130 140 150
pF1KE3 DKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRE
: : :. : .::.:.:. :: :.:::::: ..:::::.:::::: : : .::.:.:
CCDS58 CKMRK-RGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQE
40 50 60 70 80
160 170 180 190 200
pF1KE3 NIAEWKNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKAN-----------------
.: ...: .::. . ..:::. :.:.:: . .:.:: : . :.
CCDS58 EIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVA
90 100 110 120 130 140
210 220 230 240
pF1KE3 ------EVDRMV--------LVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYA
:. .. .:::: :.::.:::. : .. ::. : :: :...
CCDS58 AIHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFV
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE3 ILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAIRRTHNG
. :::..:. : ::...:.. ::::::::.: . .: ::...::::::.::::: :::
CCDS58 MATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNG
210 220 230 240 250 260
310
pF1KE3 ESVSYLFSHVPL
::.:::: .. :
CCDS58 ESMSYLFRNIGLDD
270 280
>>CCDS58526.1 PRPSAP2 gene_id:5636|Hs108|chr17 (329 aa)
initn: 784 init1: 368 opt: 375 Z-score: 508.9 bits: 102.4 E(32554): 5e-22
Smith-Waterman score: 733; 43.8% identity (69.1% similar) in 288 aa overlap (62-318:41-327)
40 50 60 70 80 90
pF1KE3 TKKFSNQETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPC
..: ..::::::. ::: . .. . .:::
CCDS58 TKMNITKGGLVLFSANSNSSCMELSKKIAEDVNTTIMELLIMVYACKTSCAKSIIGVIPY
20 30 40 50 60 70
100 110 120 130 140 150
pF1KE3 FPYARQDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAV
:::..: : : :. : .::.:.:. :: :.:::::: ..:::::.:::::: : : .
CCDS58 FPYSKQCKMRK-RGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFL
80 90 100 110 120
160 170 180 190 200
pF1KE3 LQWIRENIAEWKNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKAN-----------
::.:.:.: ...: .::. . ..:::. :.:.:: . .:.:: : . :.
CCDS58 LQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPP
130 140 150 160 170 180
210 220 230 240
pF1KE3 ------------EVDRMV--------LVGDVKDRVAILVDDMADTCGTICHAADKLLSAG
:. .. .:::: :.::.:::. : .. ::. : :
CCDS58 MVRSVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERG
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 ATKVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAI
: :.... :::..:. : ::...:.. ::::::::.: . .: ::...::::::.:::
CCDS58 AYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAI
250 260 270 280 290 300
310
pF1KE3 RRTHNGESVSYLFSHVPL
:: :::::.:::: .. :
CCDS58 RRIHNGESMSYLFRNIGLDD
310 320
>>CCDS11200.1 PRPSAP2 gene_id:5636|Hs108|chr17 (369 aa)
initn: 955 init1: 368 opt: 375 Z-score: 508.0 bits: 102.4 E(32554): 5.7e-22
Smith-Waterman score: 908; 44.7% identity (71.1% similar) in 349 aa overlap (4-318:20-367)
10 20 30 40
pF1KE3 MPNIVLFSGSSHQ---DLSQRVADRLGLELGKVVTKKFSNQETS
.::::..:.. .::...:.:::.:.::: . . :.::
CCDS11 MFCVTPPELETKMNITKGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETR
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 VEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKD
:.: :::::.::.:::. ..: ..::::::. ::: . .. . .::: :::..: :
CCDS11 VQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMR
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 KSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAE
: :. : .::.:.:. :: :.:::::: ..:::::.:::::: : : .::.:.:.: .
CCDS11 K-RGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPD
130 140 150 160 170
170 180 190 200
pF1KE3 WKNCIIVSPDAGGAKRVTSIADRLNVEFALIHKERKKAN---------------------
..: .::. . ..:::. :.:.:: . .:.:: : . :.
CCDS11 YRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVRSVAAIHP
180 190 200 210 220 230
210 220 230 240 250
pF1KE3 --EVDRMV--------LVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVYAILTH
:. .. .:::: :.::.:::. : .. ::. : :: :.... ::
CCDS11 SLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATH
240 250 260 270 280 290
260 270 280 290 300 310
pF1KE3 GIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAIRRTHNGESVS
:..:. : ::...:.. ::::::::.: . .: ::...::::::.::::: :::::.:
CCDS11 GLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMS
300 310 320 330 340 350
pF1KE3 YLFSHVPL
::: .. :
CCDS11 YLFRNIGLDD
360
>>CCDS82209.1 PRPSAP1 gene_id:5635|Hs108|chr17 (282 aa)
initn: 638 init1: 345 opt: 352 Z-score: 479.1 bits: 96.7 E(32554): 2.3e-20
Smith-Waterman score: 678; 44.8% identity (66.5% similar) in 281 aa overlap (68-316:1-278)
40 50 60 70 80 90
pF1KE3 QETSVEIGESVRGEDVYIIQSGCGEINDNLMELLIMINACKIASSSRVTAVIPCFPYARQ
:::::: : : : . . .::: :::..:
CCDS82 MELLIMAYALKTACARNIIGVIPYFPYSKQ
10 20 30
100 110 120 130 140 150
pF1KE3 DKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRE
.: : :. : ::.:.::. :: :::::::: ..:::::..::::: : : .::.:.:
CCDS82 SKMRK-RGSIVCKLLASMLAKAGLTHIITMDLHQKEIQGFFSFPVDNLRASPFLLQYIQE
40 50 60 70 80
160 170 180 190
pF1KE3 NIAEWKNCIIV--SPDAGGAKRVTSIADRLNVEFALIHKERK------------------
.: ...: .:: :::: :::. : :.:: . .:.:: : .
CCDS82 EIPNYRNAVIVAKSPDA--AKRAQSYAERLRLGLAVIHGEAQCTELDMDDGRHSPPMVKN
90 100 110 120 130 140
200 210 220 230 240
pF1KE3 ------------KANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGATKVY
:.: ...:::: :.::.:::. : .. ::. : :: :.:
CCDS82 ATVHPGLELPLMMAKEKPPITVVGDVGGRIAIIVDDIIDDVESFVAAAEILKERGAYKIY
150 160 170 180 190 200
250 260 270 280 290 300
pF1KE3 AILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAIRRTHN
.. ::::.:. : :.... . ::::::.:.: . .: ::...:::.::.::::: ::
CCDS82 VMATHGILSAEAPRLIEESSVDEVVVTNTVPHEVQKLQCPKIKTVDISLILSEAIRRIHN
210 220 230 240 250 260
310
pF1KE3 GESVSYLFSHVPL
:::..::: ..
CCDS82 GESMAYLFRNITVDD
270 280
318 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 12:52:35 2016 done: Sun Nov 6 12:52:35 2016
Total Scan time: 2.080 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]