Result of FASTA (ccds) for
pFN21AE3124
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3124, 313 aa
1>>>pF1KE3124 313 - 313 aa - 313 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.5559+/-0.000822; mu= 14.0839+/- 0.049
mean_var=62.8783+/-12.674, 0's: 0 Z-trim(106.6): 34 B-trim: 0 in 0/49
Lambda= 0.161742
statistics sampled from 9038 (9070) to 9038 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.664), E-opt: 0.2 (0.279), width: 16
Scan time: 2.200
The best scores are: opt bits E(32554)
CCDS9128.1 KCTD10 gene_id:83892|Hs108|chr12 ( 313) 2047 486.2 1.4e-137
CCDS11227.1 TNFAIP1 gene_id:7126|Hs108|chr17 ( 316) 1452 347.3 8.9e-96
CCDS10661.1 KCTD13 gene_id:253980|Hs108|chr16 ( 329) 1418 339.4 2.3e-93
CCDS31645.1 KCTD21 gene_id:283219|Hs108|chr11 ( 260) 266 70.6 1.5e-12
CCDS55117.1 KCTD7 gene_id:154881|Hs108|chr7 ( 288) 266 70.6 1.7e-12
CCDS5534.1 KCTD7 gene_id:154881|Hs108|chr7 ( 289) 266 70.6 1.7e-12
CCDS9396.1 KCTD4 gene_id:386618|Hs108|chr13 ( 259) 246 65.9 3.8e-11
>>CCDS9128.1 KCTD10 gene_id:83892|Hs108|chr12 (313 aa)
initn: 2047 init1: 2047 opt: 2047 Z-score: 2583.4 bits: 486.2 E(32554): 1.4e-137
Smith-Waterman score: 2047; 100.0% identity (100.0% similar) in 313 aa overlap (1-313:1-313)
10 20 30 40 50 60
pF1KE3 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQDTMLKAM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQDTMLKAM
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 FSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 VEECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 VEECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDD
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 NMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIVYATEKKQT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 NMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIVYATEKKQT
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE3 KVEFPEARIYEETLNILLYEAQDGRGPDNALLEATGGAAGRSHHLDEDEERERIERVRRI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS91 KVEFPEARIYEETLNILLYEAQDGRGPDNALLEATGGAAGRSHHLDEDEERERIERVRRI
250 260 270 280 290 300
310
pF1KE3 HIKRPDDRAHLHQ
:::::::::::::
CCDS91 HIKRPDDRAHLHQ
310
>>CCDS11227.1 TNFAIP1 gene_id:7126|Hs108|chr17 (316 aa)
initn: 880 init1: 780 opt: 1452 Z-score: 1833.0 bits: 347.3 E(32554): 8.9e-96
Smith-Waterman score: 1452; 70.7% identity (88.2% similar) in 314 aa overlap (4-313:1-311)
10 20 30 40 50 60
pF1KE3 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQDTMLKAM
:::.. . : .: . ..::: . ..:::.:::::.:::::...::..:::::::
CCDS11 MSGDTCLCPA-SGAKPKLSGFKGGGLGNKYVQLNVGGSLYYTTVRALTRHDTMLKAM
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 FSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGL
::::::::::.:::::::::::::::::::::: .. ::..:.::.::.:::::::.:::
CCDS11 FSGRMEVLTDKEGWILIDRCGKHFGTILNYLRDDTITLPQNRQEIKELMAEAKYYLIQGL
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 VEECQAALQNK-DTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSD
:. ::.:::.: :.:.: :..:.::: :::..:: .:.::.:::::::::::::::::::
CCDS11 VNMCQSALQDKKDSYQPVCNIPIITSLKEEERLIESSTKPVVKLLYNRSNNKYSYTSNSD
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 DNMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIVYATEKKQ
:..::::::::::::::::::::::::::::::::::::::::.::::::::::::::::
CCDS11 DHLLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKLAEVCCTSIVYATEKKQ
180 190 200 210 220 230
240 250 260 270 280 290
pF1KE3 TKVEFPEARIYEETLNILLYEAQDGRGPDNALLEATGGAAGRSHHLDEDEERERIERVRR
::::::::::::::::.::::. : :::.:::::. . ... ...: : .::::
CCDS11 TKVEFPEARIYEETLNVLLYETP--RVPDNSLLEATSRSRSQASPSEDEETFELRDRVRR
240 250 260 270 280 290
300 310
pF1KE3 IHIKRP---DDRAHLHQ
::.:: ::: ::
CCDS11 IHVKRYSTYDDRQLGHQSTHRD
300 310
>>CCDS10661.1 KCTD13 gene_id:253980|Hs108|chr16 (329 aa)
initn: 898 init1: 763 opt: 1418 Z-score: 1789.8 bits: 339.4 E(32554): 2.3e-93
Smith-Waterman score: 1418; 72.4% identity (89.8% similar) in 294 aa overlap (24-313:33-324)
10 20 30 40 50
pF1KE3 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQ
.: .:.::::::::::.:.:::..::: :
CCDS10 AEASGPAAAAAPSLEAPKPSGLEPGPAAYGLKPLTPNSKYVKLNVGGSLHYTTLRTLTGQ
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 DTMLKAMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAK
:::::::::::.:::::. ::.:::: :.::::::::::::.:::::: ::. :::.::.
CCDS10 DTMLKAMFSGRVEVLTDAGGWVLIDRSGRHFGTILNYLRDGSVPLPESTRELGELLGEAR
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 YYLVQGLVEECQAALQNK-DTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKY
:::::::.:.:: :::.: .: :.: .:..:: .:::.:.:...::.::::.:::::::
CCDS10 YYLVQGLIEDCQLALQQKRETLSPLCLIPMVTSPREEQQLLASTSKPVVKLLHNRSNNKY
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE3 SYTSNSDDNMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIV
::::.::::.::::::::::.:::.::.::.:::.:::::::::::::::::::::::::
CCDS10 SYTSTSDDNLLKNIELFDKLALRFHGRLLFLKDVLGDEICCWSFYGQGRKIAEVCCTSIV
190 200 210 220 230 240
240 250 260 270 280 290
pF1KE3 YATEKKQTKVEFPEARIYEETLNILLYEAQDGRGPDNALLEATGGAAGRSHHLDEDEERE
:::::::::::::::::.:::::::.::. :::: ::::::::::: . ..:..
CCDS10 YATEKKQTKVEFPEARIFEETLNILIYETP--RGPDPALLEATGGAAGAGGAGRGEDEEN
250 260 270 280 290 300
300 310
pF1KE3 RIERVRRIHIKRP---DDRAHLHQ
: .::::::..: :.: : .:
CCDS10 REHRVRRIHVRRHITHDERPHGQQIVFKD
310 320
>>CCDS31645.1 KCTD21 gene_id:283219|Hs108|chr11 (260 aa)
initn: 278 init1: 195 opt: 266 Z-score: 338.7 bits: 70.6 E(32554): 1.5e-12
Smith-Waterman score: 278; 37.7% identity (61.1% similar) in 175 aa overlap (31-202:2-164)
10 20 30 40 50
pF1KE3 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTK-QDTMLKA
: . ::::: :: :.. :::. :.:: :
CCDS31 MSDPITLNVGGKLYTTSLATLTSFPDSMLGA
10 20 30
60 70 80 90 100 110
pF1KE3 MFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQG
::::.: . ::.: .::: :: : :::.:: . . :::. .:. : :: .: ::
CCDS31 MFSGKMPTKRDSQGNCFIDRDGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQP
40 50 60 70 80 90
120 130 140 150 160 170
pF1KE3 LVEECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNK--PAVKLLYNRSNNKYSYTSN
:.: :::.:.. ....... : : :. .:.. .. . :: .:.
CCDS31 LIE----ALQEKEVE--------LSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSS
100 110 120 130
180 190 200 210 220 230
pF1KE3 SDDNMLKNIELFDKLSLRFNGRVLFIKDVIGDEICCWSFYGQGRKIAEVCCTSIVYATEK
: . . :: . : :.. : ::
CCDS31 SMEVFNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQDPNHLTLDWVANVEGLPEEE
140 150 160 170 180 190
>>CCDS55117.1 KCTD7 gene_id:154881|Hs108|chr7 (288 aa)
initn: 264 init1: 194 opt: 266 Z-score: 338.0 bits: 70.6 E(32554): 1.7e-12
Smith-Waterman score: 266; 44.9% identity (68.2% similar) in 107 aa overlap (34-137:53-156)
10 20 30 40 50 60
pF1KE3 MSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLT-KQDTMLKAMFS
: ::.::: . : ..:: .:::: ::::
CCDS55 AEDDFLEPATPTATQAGHALPLLPQEFPEVVPLNIGGAHFTTRLSTLRCYEDTMLAAMFS
30 40 50 60 70 80
70 80 90 100 110 120
pF1KE3 GRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGLVE
:: . ::::: .::: : ::: .::.::.: .: : :.... . ::.:: . :.:
CCDS55 GRHYIPTDSEGRYFIDRDGTHFGDVLNFLRSGDLP-P--RERVRAVYKEAQYYAIGPLLE
90 100 110 120 130
130 140 150 160 170 180
pF1KE3 --ECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDD
: . :... . . :
CCDS55 QLENMQPLKGEKVRQAFLGLMPYYKDHLERIVEIARLRAVQRKARFAKLKVCVFKEEMPI
140 150 160 170 180 190
>>CCDS5534.1 KCTD7 gene_id:154881|Hs108|chr7 (289 aa)
initn: 264 init1: 194 opt: 266 Z-score: 338.0 bits: 70.6 E(32554): 1.7e-12
Smith-Waterman score: 266; 44.9% identity (68.2% similar) in 107 aa overlap (34-137:53-156)
10 20 30 40 50 60
pF1KE3 MSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLT-KQDTMLKAMFS
: ::.::: . : ..:: .:::: ::::
CCDS55 AEDDFLEPATPTATQAGHALPLLPQEFPEVVPLNIGGAHFTTRLSTLRCYEDTMLAAMFS
30 40 50 60 70 80
70 80 90 100 110 120
pF1KE3 GRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQGLVE
:: . ::::: .::: : ::: .::.::.: .: : :.... . ::.:: . :.:
CCDS55 GRHYIPTDSEGRYFIDRDGTHFGDVLNFLRSGDLP-P--RERVRAVYKEAQYYAIGPLLE
90 100 110 120 130
130 140 150 160 170 180
pF1KE3 --ECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNSDD
: . :... . . :
CCDS55 QLENMQPLKGEKVRQAFLGLMPYYKDHLERIVEIARLRAVQRKARFAKLKVCVFKEEMPI
140 150 160 170 180 190
>>CCDS9396.1 KCTD4 gene_id:386618|Hs108|chr13 (259 aa)
initn: 244 init1: 176 opt: 246 Z-score: 313.5 bits: 65.9 E(32554): 3.8e-11
Smith-Waterman score: 246; 39.8% identity (66.4% similar) in 113 aa overlap (25-136:26-137)
10 20 30 40 50
pF1KE3 MEEMSGESVVSSAVPAAATRTTSFKGTSPSSKYVKLNVGGALYYTTMQTLTKQ-DTMLK
.: . .: . ::::: :: : ::::: ::.:.
CCDS93 MERKINRREKEKEYEGKHNSLEDTDQGKNCKSTLMTLNVGGYLYITQKQTLTKYPDTFLE
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 AMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLRDGAVPLPESRREIEELLAEAKYYLVQ
.. .:.. :..: .::: : : .::.::.: . :::. :: . : ::... ..
CCDS93 GIVNGKILCPFDADGHYFIDRDGLLFRHVLNFLRNGELLLPEGFRENQLLAQEAEFFQLK
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 GLVEECQAALQNKDTYEPFCKVPVITSSKEEQKLIATSNKPAVKLLYNRSNNKYSYTSNS
::.:: .. . :. :
CCDS93 GLAEEVKSRWE-KEQLTPRETTFLEITDNHDRSQGLRIFCNAPDFISKIKSRIVLVSKSR
130 140 150 160 170
313 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 03:22:28 2016 done: Mon Nov 7 03:22:29 2016
Total Scan time: 2.200 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]