Result of FASTA (omim) for
pFN21AE3108
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3108, 277 aa
1>>>pF1KE3108 277 - 277 aa - 277 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0119+/-0.000329; mu= 17.0457+/- 0.021
mean_var=66.6700+/-13.322, 0's: 0 Z-trim(115.2): 39 B-trim: 0 in 0/54
Lambda= 0.157076
statistics sampled from 25417 (25456) to 25417 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.298), width: 16
Scan time: 6.650
The best scores are: opt bits E(85289)
NP_113620 (OMIM: 609328) uridine-cytidine kinase 1 ( 277) 1856 429.1 4.3e-120
NP_001248380 (OMIM: 609328) uridine-cytidine kinas ( 282) 1773 410.3 2e-114
XP_005272281 (OMIM: 609328) PREDICTED: uridine-cyt ( 291) 1606 372.5 5e-103
NP_001248379 (OMIM: 609328) uridine-cytidine kinas ( 268) 1604 372.0 6.4e-103
NP_036606 (OMIM: 609329) uridine-cytidine kinase 2 ( 261) 1191 278.4 9.4e-75
NP_001129426 (OMIM: 609328) uridine-cytidine kinas ( 201) 1115 261.1 1.2e-69
XP_016857725 (OMIM: 609329) PREDICTED: uridine-cyt ( 240) 1095 256.7 3.1e-68
NP_001305448 (OMIM: 609328) uridine-cytidine kinas ( 254) 904 213.4 3.5e-55
XP_016883389 (OMIM: 610866) PREDICTED: uridine-cyt ( 533) 702 167.8 3.8e-41
XP_016883387 (OMIM: 610866) PREDICTED: uridine-cyt ( 548) 702 167.8 3.9e-41
XP_016883385 (OMIM: 610866) PREDICTED: uridine-cyt ( 549) 702 167.8 3.9e-41
XP_016883390 (OMIM: 610866) PREDICTED: uridine-cyt ( 532) 694 166.0 1.3e-40
NP_001180308 (OMIM: 610866) uridine-cytidine kinas ( 533) 694 166.0 1.3e-40
XP_016883388 (OMIM: 610866) PREDICTED: uridine-cyt ( 547) 694 166.0 1.4e-40
NP_060329 (OMIM: 610866) uridine-cytidine kinase-l ( 548) 694 166.0 1.4e-40
XP_016883386 (OMIM: 610866) PREDICTED: uridine-cyt ( 549) 694 166.0 1.4e-40
XP_006723873 (OMIM: 610866) PREDICTED: uridine-cyt ( 549) 694 166.0 1.4e-40
XP_006723872 (OMIM: 610866) PREDICTED: uridine-cyt ( 550) 694 166.0 1.4e-40
XP_006723870 (OMIM: 610866) PREDICTED: uridine-cyt ( 557) 676 162.0 2.3e-39
XP_016883383 (OMIM: 610866) PREDICTED: uridine-cyt ( 558) 671 160.8 5.1e-39
XP_011527175 (OMIM: 610866) PREDICTED: uridine-cyt ( 361) 668 160.0 5.8e-39
XP_006723874 (OMIM: 610866) PREDICTED: uridine-cyt ( 542) 668 160.1 8e-39
XP_011527170 (OMIM: 610866) PREDICTED: uridine-cyt ( 543) 668 160.1 8e-39
XP_005260273 (OMIM: 610866) PREDICTED: uridine-cyt ( 556) 668 160.1 8.1e-39
XP_016883384 (OMIM: 610866) PREDICTED: uridine-cyt ( 557) 668 160.1 8.1e-39
XP_006723871 (OMIM: 610866) PREDICTED: uridine-cyt ( 557) 668 160.1 8.1e-39
XP_006723869 (OMIM: 610866) PREDICTED: uridine-cyt ( 558) 668 160.1 8.1e-39
XP_011508272 (OMIM: 609329) PREDICTED: uridine-cyt ( 208) 659 157.8 1.5e-38
XP_016883391 (OMIM: 610866) PREDICTED: uridine-cyt ( 434) 635 152.6 1.2e-36
XP_011527171 (OMIM: 610866) PREDICTED: uridine-cyt ( 442) 609 146.7 7.2e-35
XP_016883392 (OMIM: 610866) PREDICTED: uridine-cyt ( 430) 588 141.9 1.9e-33
XP_011527173 (OMIM: 610866) PREDICTED: uridine-cyt ( 432) 588 141.9 1.9e-33
XP_011527172 (OMIM: 610866) PREDICTED: uridine-cyt ( 432) 588 141.9 1.9e-33
XP_011527174 (OMIM: 610866) PREDICTED: uridine-cyt ( 432) 588 141.9 1.9e-33
XP_016883394 (OMIM: 610866) PREDICTED: uridine-cyt ( 340) 323 81.8 1.9e-15
XP_016883395 (OMIM: 610866) PREDICTED: uridine-cyt ( 340) 323 81.8 1.9e-15
XP_016883393 (OMIM: 610866) PREDICTED: uridine-cyt ( 342) 323 81.8 1.9e-15
XP_016883396 (OMIM: 610866) PREDICTED: uridine-cyt ( 329) 309 78.6 1.7e-14
XP_016883397 (OMIM: 610866) PREDICTED: uridine-cyt ( 329) 309 78.6 1.7e-14
>>NP_113620 (OMIM: 609328) uridine-cytidine kinase 1 iso (277 aa)
initn: 1856 init1: 1856 opt: 1856 Z-score: 2277.1 bits: 429.1 E(85289): 4.3e-120
Smith-Waterman score: 1856; 100.0% identity (100.0% similar) in 277 aa overlap (1-277:1-277)
10 20 30 40 50 60
pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR
190 200 210 220 230 240
250 260 270
pF1KE3 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
:::::::::::::::::::::::::::::::::::::
NP_113 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
250 260 270
>>NP_001248380 (OMIM: 609328) uridine-cytidine kinase 1 (282 aa)
initn: 1789 init1: 1606 opt: 1773 Z-score: 2175.3 bits: 410.3 E(85289): 2e-114
Smith-Waterman score: 1773; 95.4% identity (96.5% similar) in 282 aa overlap (1-277:1-282)
10 20 30 40 50
pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIG---VSGGTA--SGKSTVCEKIMELLGQNEVEQR
::::::::::::::::::::::::::: ..: .:::::::::::::::::::
NP_001 MASAGGEDCESPAPEADRPHQRPFLIGDERFQAGIPLLCLQSTVCEKIMELLGQNEVEQR
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 QRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTY
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 DFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVR
130 140 150 160 170 180
180 190 200 210 220 230
pF1KE3 RGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDI
190 200 210 220 230 240
240 250 260 270
pF1KE3 CKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
::::::::::::::::::::::::::::::::::::::::::
NP_001 CKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
250 260 270 280
>>XP_005272281 (OMIM: 609328) PREDICTED: uridine-cytidin (291 aa)
initn: 1606 init1: 1606 opt: 1606 Z-score: 1970.6 bits: 372.5 E(85289): 5e-103
Smith-Waterman score: 1818; 95.2% identity (95.2% similar) in 291 aa overlap (1-277:1-291)
10 20 30 40
pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGK--------------STVCEKIMEL
:::::::::::::::::::::::::::::::::::: ::::::::::
XP_005 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKDERFQAGIPLLCLQSTVCEKIMEL
10 20 30 40 50 60
50 60 70 80 90 100
pF1KE3 LGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVE
70 80 90 100 110 120
110 120 130 140 150 160
pF1KE3 GKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRL
130 140 150 160 170 180
170 180 190 200 210 220
pF1KE3 SRRVLRDVRRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 SRRVLRDVRRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQH
190 200 210 220 230 240
230 240 250 260 270
pF1KE3 IQDILNGDICKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
:::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 IQDILNGDICKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
250 260 270 280 290
>>NP_001248379 (OMIM: 609328) uridine-cytidine kinase 1 (268 aa)
initn: 1787 init1: 1604 opt: 1604 Z-score: 1968.7 bits: 372.0 E(85289): 6.4e-103
Smith-Waterman score: 1773; 96.8% identity (96.8% similar) in 277 aa overlap (1-277:1-268)
10 20 30 40 50 60
pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV
::::::::::::::::::::::::::: ::::::::::::::::::::::::
NP_001 MASAGGEDCESPAPEADRPHQRPFLIG---------STVCEKIMELLGQNEVEQRQRKVV
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE3 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR
180 190 200 210 220 230
250 260 270
pF1KE3 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
:::::::::::::::::::::::::::::::::::::
NP_001 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
240 250 260
>>NP_036606 (OMIM: 609329) uridine-cytidine kinase 2 [Ho (261 aa)
initn: 1208 init1: 808 opt: 1191 Z-score: 1463.0 bits: 278.4 E(85289): 9.4e-75
Smith-Waterman score: 1195; 69.5% identity (85.3% similar) in 272 aa overlap (8-277:4-261)
10 20 30 40 50
pF1KE3 MASAGGEDCESPAPEADRPHQ-RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKV
: :. . ..:. .:::::::::::::::.:: ::..:::::::. ::..:
NP_036 MAGDSEQTLQNHQQPNGGEPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQV
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 VILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVT
:::::: ::.:::.::::::::::.::::::::::.:. .:::.:.:::::..:.::::.
NP_036 VILSQDSFYRVLTSEQKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVS
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 HSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDV-RRGR
::: ::..:::::::::::::.:::::.::.:...::::::.:.:::::::::. .:::
NP_036 HSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGR
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 DLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKW
::::::.:: :::::::::::::::::::::::::.::.::::::::::::::::
NP_036 DLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDILNG-----
180 190 200 210 220 230
240 250 260 270
pF1KE3 HRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
: : ..: : :. : ::. :::::::
NP_036 ------GPSKRQT---NGCLNGYTPSRKRQASESSSRPH
240 250 260
>>NP_001129426 (OMIM: 609328) uridine-cytidine kinase 1 (201 aa)
initn: 1115 init1: 1115 opt: 1115 Z-score: 1371.6 bits: 261.1 E(85289): 1.2e-69
Smith-Waterman score: 1115; 100.0% identity (100.0% similar) in 169 aa overlap (1-169:1-169)
10 20 30 40 50 60
pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL
:::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRDKEVCRCDHPA
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR
NP_001 RSGQYGCHQPDRAAHPGHSEW
190 200
>>XP_016857725 (OMIM: 609329) PREDICTED: uridine-cytidin (240 aa)
initn: 1110 init1: 710 opt: 1095 Z-score: 1346.0 bits: 256.7 E(85289): 3.1e-68
Smith-Waterman score: 1099; 71.1% identity (86.4% similar) in 242 aa overlap (37-277:13-240)
10 20 30 40 50 60
pF1KE3 EDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDR
:.:: ::..:::::::. ::..:::::::
XP_016 MELNEIMSSECHSSVCAKIVQLLGQNEVDYRQKQVVILSQDS
10 20 30 40
70 80 90 100 110 120
pF1KE3 FYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPET
::.:::.::::::::::.::::::::::.:. .:::.:.:::::..:.::::.::: ::
XP_016 FYRVLTSEQKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEET
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE3 TVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDV-RRGRDLEQILT
..:::::::::::::.:::::.::.:...::::::.:.:::::::::. .:::::::::.
XP_016 VTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILS
110 120 130 140 150 160
190 200 210 220 230 240
pF1KE3 QYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHRGGSNG
:: :::::::::::::::::::::::::.::.:::::::::::::::: :
XP_016 QYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDILNG-----------G
170 180 190 200 210
250 260 270
pF1KE3 RSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
: ..: : :. : ::. :::::::
XP_016 PSKRQT---NGCLNGYTPSRKRQASESSSRPH
220 230 240
>>NP_001305448 (OMIM: 609328) uridine-cytidine kinase 1 (254 aa)
initn: 1695 init1: 904 opt: 904 Z-score: 1111.7 bits: 213.4 E(85289): 3.5e-55
Smith-Waterman score: 1653; 91.7% identity (91.7% similar) in 277 aa overlap (1-277:1-254)
10 20 30 40 50 60
pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVV
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTH
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 SRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL
: ::::::::::::::::::::::::::::::::::::
NP_001 S-----------------------SQEIRDMFHLRLFVDTDSDVRLSRRVLRDVRRGRDL
130 140 150
190 200 210 220 230 240
pF1KE3 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNGDICKWHR
160 170 180 190 200 210
250 260 270
pF1KE3 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
:::::::::::::::::::::::::::::::::::::
NP_001 GGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
220 230 240 250
>>XP_016883389 (OMIM: 610866) PREDICTED: uridine-cytidin (533 aa)
initn: 700 init1: 426 opt: 702 Z-score: 859.8 bits: 167.8 E(85289): 3.8e-41
Smith-Waterman score: 702; 47.9% identity (77.2% similar) in 219 aa overlap (21-238:80-291)
10 20 30 40 50
pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQN
.. : ::..::.::::.:: . :.: :
XP_016 KSEPPLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIEAL---
50 60 70 80 90 100
60 70 80 90 100 110
pF1KE3 EVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTV
.: ::.::.: :::::: .:. .: ....::::::::: ::. :::.. .::.:
XP_016 DVPW----VVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAFDFDLIISTLKKLKQGKSV
110 120 130 140 150 160
120 130 140 150 160 170
pF1KE3 EVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRV
.:: :::.:::: . ..: :.:..::::..: .. . ... ...:::::::.:: ::.
XP_016 KVPIYDFTTHSRKKDWKTLYGANVIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRL
170 180 190 200 210 220
180 190 200 210 220
pF1KE3 LRDV-RRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQD
::. .::::.: .. ::. ::::.:... :: . ::...::: : :::.:::::...
XP_016 RRDISERGRDIEGVIKQYNKFVKPSFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHS
230 240 250 260 270 280
230 240 250 260 270
pF1KE3 ILNGDICKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
:. .:
XP_016 QLEERKLRWDMAALASAHQCHPLPRTLSVLKSTPQVRGMHTIIRDKETSRDEFIFYSKRL
290 300 310 320 330 340
>>XP_016883387 (OMIM: 610866) PREDICTED: uridine-cytidin (548 aa)
initn: 700 init1: 426 opt: 702 Z-score: 859.6 bits: 167.8 E(85289): 3.9e-41
Smith-Waterman score: 702; 47.9% identity (77.2% similar) in 219 aa overlap (21-238:95-306)
10 20 30 40 50
pF1KE3 MASAGGEDCESPAPEADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQN
.. : ::..::.::::.:: . :.: :
XP_016 KSEPPLLRTSKRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIEAL---
70 80 90 100 110 120
60 70 80 90 100 110
pF1KE3 EVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTV
.: ::.::.: :::::: .:. .: ....::::::::: ::. :::.. .::.:
XP_016 DVPW----VVLLSMDSFYKVLTEQQQEQAAHNNFNFDHPDAFDFDLIISTLKKLKQGKSV
130 140 150 160 170
120 130 140 150 160 170
pF1KE3 EVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRV
.:: :::.:::: . ..: :.:..::::..: .. . ... ...:::::::.:: ::.
XP_016 KVPIYDFTTHSRKKDWKTLYGANVIIFEGIMAFADKTLLELLDMKIFVDTDSDIRLVRRL
180 190 200 210 220 230
180 190 200 210 220
pF1KE3 LRDV-RRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQD
::. .::::.: .. ::. ::::.:... :: . ::...::: : :::.:::::...
XP_016 RRDISERGRDIEGVIKQYNKFVKPSFDQYIQPTMRLADIVVPRGSGNTVAIDLIVQHVHS
240 250 260 270 280 290
230 240 250 260 270
pF1KE3 ILNGDICKWHRGGSNGRSYKRTFSEPGDHPGMLTSGKRSHLESSSRPH
:. .:
XP_016 QLEERKLRWDMAALASAHQCHPLPRTLSVLKSTPQVRGMHTIIRDKETSRDEFIFYSKRL
300 310 320 330 340 350
277 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 15:39:41 2016 done: Sun Nov 6 15:39:42 2016
Total Scan time: 6.650 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]