Result of FASTA (ccds) for
pFN21AE3086
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3086, 251 aa
1>>>pF1KE3086 251 - 251 aa - 251 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0471+/-0.000686; mu= 15.8969+/- 0.041
mean_var=64.5374+/-13.080, 0's: 0 Z-trim(110.8): 161 B-trim: 435 in 1/51
Lambda= 0.159650
statistics sampled from 11698 (11866) to 11698 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.743), E-opt: 0.2 (0.365), width: 16
Scan time: 1.900
The best scores are: opt bits E(32554)
CCDS12044.1 AZU1 gene_id:566|Hs108|chr19 ( 251) 1710 402.0 2e-112
CCDS12045.1 ELANE gene_id:1991|Hs108|chr19 ( 267) 682 165.2 3.9e-41
CCDS32860.1 PRTN3 gene_id:5657|Hs108|chr19 ( 256) 657 159.5 2.1e-39
CCDS9631.1 CTSG gene_id:1511|Hs108|chr14 ( 255) 441 109.7 1.9e-24
CCDS9632.1 GZMH gene_id:2999|Hs108|chr14 ( 246) 434 108.1 5.8e-24
CCDS12031.1 GZMM gene_id:3004|Hs108|chr19 ( 257) 434 108.1 6e-24
CCDS12809.1 KLK4 gene_id:9622|Hs108|chr19 ( 254) 415 103.7 1.2e-22
CCDS82261.1 CFD gene_id:1675|Hs108|chr19 ( 260) 395 99.1 3.1e-21
CCDS12046.1 CFD gene_id:1675|Hs108|chr19 ( 253) 393 98.7 4.1e-21
CCDS9630.1 CMA1 gene_id:1215|Hs108|chr14 ( 247) 389 97.7 7.6e-21
CCDS43523.1 LPA gene_id:4018|Hs108|chr6 (2040) 391 98.8 3e-20
CCDS12811.1 KLK6 gene_id:5653|Hs108|chr19 ( 244) 376 94.7 6e-20
CCDS12813.1 KLK8 gene_id:11202|Hs108|chr19 ( 260) 376 94.8 6.3e-20
CCDS12822.1 KLK13 gene_id:26085|Hs108|chr19 ( 277) 375 94.5 7.8e-20
CCDS3964.1 GZMK gene_id:3003|Hs108|chr5 ( 264) 371 93.6 1.4e-19
CCDS5872.1 PRSS1 gene_id:5644|Hs108|chr7 ( 247) 368 92.9 2.2e-19
CCDS42600.1 KLK8 gene_id:11202|Hs108|chr19 ( 305) 368 93.0 2.6e-19
CCDS12819.1 KLK11 gene_id:11012|Hs108|chr19 ( 250) 352 89.2 2.8e-18
CCDS12818.1 KLK11 gene_id:11012|Hs108|chr19 ( 282) 352 89.3 3.1e-18
CCDS56570.1 PRSS3 gene_id:5646|Hs108|chr9 ( 240) 347 88.1 6.1e-18
CCDS6545.1 PRSS3 gene_id:5646|Hs108|chr9 ( 247) 347 88.1 6.2e-18
CCDS56571.1 PRSS3 gene_id:5646|Hs108|chr9 ( 261) 347 88.1 6.5e-18
CCDS12810.1 KLK5 gene_id:25818|Hs108|chr19 ( 293) 347 88.1 7.2e-18
CCDS47958.1 PRSS3 gene_id:5646|Hs108|chr9 ( 304) 347 88.1 7.4e-18
CCDS83236.1 PRSS2 gene_id:5645|Hs108|chr7 ( 247) 338 86.0 2.6e-17
CCDS12816.1 KLK9 gene_id:284366|Hs108|chr19 ( 250) 338 86.0 2.6e-17
CCDS12823.2 KLK14 gene_id:43847|Hs108|chr19 ( 267) 335 85.3 4.5e-17
CCDS74240.1 GZMM gene_id:3004|Hs108|chr19 ( 218) 330 84.1 8.5e-17
CCDS74856.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 802) 334 85.4 1.3e-16
CCDS13941.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 811) 334 85.4 1.3e-16
CCDS9633.1 GZMB gene_id:3002|Hs108|chr14 ( 247) 324 82.8 2.5e-16
CCDS77203.1 PRSS57 gene_id:400668|Hs108|chr19 ( 282) 320 81.9 5.2e-16
CCDS12041.1 PRSS57 gene_id:400668|Hs108|chr19 ( 283) 317 81.2 8.4e-16
CCDS3965.1 GZMA gene_id:3001|Hs108|chr5 ( 262) 314 80.5 1.3e-15
CCDS12812.1 KLK7 gene_id:5650|Hs108|chr19 ( 253) 311 79.8 2e-15
CCDS74669.1 PRSS56 gene_id:646960|Hs108|chr2 ( 603) 312 80.3 3.4e-15
CCDS10852.1 CTRL gene_id:1506|Hs108|chr16 ( 264) 303 78.0 7.4e-15
CCDS42110.1 PRSS33 gene_id:260429|Hs108|chr16 ( 280) 298 76.8 1.7e-14
CCDS5279.1 PLG gene_id:5340|Hs108|chr6 ( 810) 302 78.0 2.1e-14
CCDS33757.2 MST1 gene_id:4485|Hs108|chr3 ( 725) 297 76.9 4.3e-14
CCDS30605.1 CELA2B gene_id:51032|Hs108|chr1 ( 269) 291 75.2 5.1e-14
CCDS12821.1 KLK12 gene_id:43849|Hs108|chr19 ( 248) 284 73.6 1.5e-13
CCDS12820.1 KLK12 gene_id:43849|Hs108|chr19 ( 254) 284 73.6 1.5e-13
CCDS10481.1 PRSS22 gene_id:64063|Hs108|chr16 ( 317) 282 73.2 2.4e-13
CCDS32489.1 CTRB2 gene_id:440387|Hs108|chr16 ( 263) 281 72.9 2.5e-13
CCDS32490.1 CTRB1 gene_id:1504|Hs108|chr16 ( 263) 278 72.2 4e-13
CCDS74857.1 TMPRSS6 gene_id:164656|Hs108|chr22 ( 824) 280 73.0 7.3e-13
CCDS74433.1 KLK8 gene_id:11202|Hs108|chr19 ( 139) 270 70.2 8.6e-13
CCDS3518.1 TMPRSS11D gene_id:9407|Hs108|chr4 ( 418) 271 70.7 1.8e-12
CCDS12807.1 KLK3 gene_id:354|Hs108|chr19 ( 261) 268 69.9 2e-12
>>CCDS12044.1 AZU1 gene_id:566|Hs108|chr19 (251 aa)
initn: 1710 init1: 1710 opt: 1710 Z-score: 2131.9 bits: 402.0 E(32554): 2e-112
Smith-Waterman score: 1710; 100.0% identity (100.0% similar) in 251 aa overlap (1-251:1-251)
10 20 30 40 50 60
pF1KE3 MTRLTVLALLAGLLASSRAGSSPLLDIVGGRKARPRQFPFLASIQNQGRHFCGGALIHAR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 MTRLTVLALLAGLLASSRAGSSPLLDIVGGRKARPRQFPFLASIQNQGRHFCGGALIHAR
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 FVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 FVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQ
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 LDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 LDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQC
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE3 RPNNVCTGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRGPDFFTRVALFRDWID
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS12 RPNNVCTGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRGPDFFTRVALFRDWID
190 200 210 220 230 240
250
pF1KE3 GVLNNPGPGPA
:::::::::::
CCDS12 GVLNNPGPGPA
250
>>CCDS12045.1 ELANE gene_id:1991|Hs108|chr19 (267 aa)
initn: 416 init1: 246 opt: 682 Z-score: 851.9 bits: 165.2 E(32554): 3.9e-41
Smith-Waterman score: 682; 43.9% identity (69.4% similar) in 255 aa overlap (3-250:6-257)
10 20 30 40 50
pF1KE3 MTRLTVLALLAGLLASSRAGSSPLL-DIVGGRKARPRQFPFLASIQNQGRHFCGGAL
::. : .:: .: . :.. : .:::::.:::. .::..:.: .: ::::..:
CCDS12 MTLGRRLACL-FLACVLPALLLGGTALASEIVGGRRARPHAWPFMVSLQLRGGHFCGATL
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 IHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDL
: :::.:: : . : . :::::..: ::: .::.:... . :::::: . :::.
CCDS12 IAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRRE-PTRQVFAVQRIFENGYDPVNLLNDI
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 MLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTP
..:::. :.....: . :: :. . :..: . ::: . .. . .::::.
CCDS12 VILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVVT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 EDQCRPNNVCTGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRG--PDFFTRVAL
. :: .:::: : :..:.: ::.:.::::.:: ::.::: : :. : :: :. ::
CCDS12 -SLCRRSNVCTLVRGRQAGVCFGDSGSPLVCNGLIHGIASFVRGGCASGLYPDAFAPVAQ
180 190 200 210 220 230
240 250
pF1KE3 FRDWIDGVL----NNPGPGPA
: .:::... .:: : :
CCDS12 FVNWIDSIIQRSEDNPCPHPRDPDPASRTH
240 250 260
>>CCDS32860.1 PRTN3 gene_id:5657|Hs108|chr19 (256 aa)
initn: 450 init1: 201 opt: 657 Z-score: 821.1 bits: 159.5 E(32554): 2.1e-39
Smith-Waterman score: 657; 43.6% identity (71.0% similar) in 241 aa overlap (8-243:9-247)
10 20 30 40 50
pF1KE3 MTRLTVLALLAGLLASSRAGSSPLLDIVGGRKARPRQFPFLASIQ---NQGRHFCGGAL
:: . ::: .:.. .::::..:.:.. :..::.: : : :::::.:
CCDS32 MAHRPPSPALASVLLALLLSGAARAAEIVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTL
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 IHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDL
:: ::.::: :... . .:::::...: .: ..: ::.... :.:: ...:::.
CCDS32 IHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQE-PTQQHFSVAQVFLNNYDAENKLNDV
70 80 90 100 110
120 130 140 150 160 170
pF1KE3 MLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTP
.:.::. :::..::. . :: :. : ::.: . ::: . .. . .::::.
CCDS32 LLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVVT
120 130 140 150 160 170
180 190 200 210 220 230
pF1KE3 EDQCRPNNVCTGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRG--PDFFTRVAL
:::.:.:: : :..::: ::.: ::.:.:. .:. :: . :. :::::::::
CCDS32 F-FCRPHNICTFVPRRKAGICFGDSGGPLICDGIIQGIDSFVIWGCATRLFPDFFTRVAL
180 190 200 210 220 230
240 250
pF1KE3 FRDWIDGVLNNPGPGPA
. ::: ..:
CCDS32 YVDWIRSTLRRVEAKGRP
240 250
>>CCDS9631.1 CTSG gene_id:1511|Hs108|chr14 (255 aa)
initn: 436 init1: 167 opt: 441 Z-score: 552.2 bits: 109.7 E(32554): 1.9e-24
Smith-Waterman score: 441; 35.5% identity (62.9% similar) in 248 aa overlap (6-239:4-238)
10 20 30 40 50
pF1KE3 MTRLTVLALLAGLLAS-SRAGSSPLLDIVGGRKARPRQFPFLASIQNQ---GRHFCGGAL
.: ::: :: . ..:: .:.:::..::.. :..: .: : :. ::: :
CCDS96 MQPLLLLLAFLLPTGAEAG-----EIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFL
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 IHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDL
.. ::.::: :. :. .:.:::....::: ... . .. . :. . ::.
CCDS96 VREDFVLTAAHCWGSNI----NVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDI
60 70 80 90 100
120 130 140 150 160 170
pF1KE3 MLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWG--SQRSGGRLSRFPRFVNVTV
:::::.:.. . .:. . :: . .. :: : ::::: :.: : . : :.. :
CCDS96 MLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRG---TDTLREVQLRV
110 120 130 140 150 160
180 190 200 210 220
pF1KE3 TPEDQC-------RPN-NVCTGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRGP
. :: : ..:.: .: . .::.: ::.:...:::..:.. . : :
CCDS96 QRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSS-GVPP
170 180 190 200 210 220
230 240 250
pF1KE3 DFFTRVALFRDWIDGVLNNPGPGPA
. ::::. : ::
CCDS96 EVFTRVSSFLPWIRTTMRSFKLLDQMETPL
230 240 250
>>CCDS9632.1 GZMH gene_id:2999|Hs108|chr14 (246 aa)
initn: 371 init1: 193 opt: 434 Z-score: 543.7 bits: 108.1 E(32554): 5.8e-24
Smith-Waterman score: 434; 35.0% identity (65.0% similar) in 246 aa overlap (7-239:5-239)
10 20 30 40 50
pF1KE3 MTRLTVLALLAGLLASSRAGSSPLLDIVGGRKARPRQFPFLASIQ---NQGRHFCGGALI
: ::: ::. . ::. .:.::..:.:.. :..: .: ...:. ::: :.
CCDS96 MQPFLLLLAFLLTPG-AGTE---EIIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILV
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 HARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISS-MSENGYDPQQNLNDL
. ::.::: : :. ... :.:::......:: ..: . .. . . .:.:.. ::.
CCDS96 RKDFVLTAAHC---QGSSIN-VTLGAHNIKEQER-TQQFIPVKRPIPHPAYNPKNFSNDI
60 70 80 90 100
120 130 140 150 160 170
pF1KE3 MLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTP
:::::.:.:. :..: : :: ..: :. : :.::::: : . :. . : .::
CCDS96 MLLQLERKAKWTTAVRPLRLPSSKAQVKPGQLCSVAGWG-YVSMSTLATTLQEVLLTVQK
110 120 130 140 150 160
180 190 200 210 220
pF1KE3 EDQC---------RPNNVCTGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRGPD
. :: : ...:.: . .::.: ::::. .:.:. :.. . : :
CCDS96 DCQCERLFHGNYSRATEICVGDPKKTQTGFKGDSGGPLVCKDVAQGILSYG-NKKGTPPG
170 180 190 200 210 220
230 240 250
pF1KE3 FFTRVALFRDWIDGVLNNPGPGPA
. .:. : ::
CCDS96 VYIKVSHFLPWIKRTMKRL
230 240
>>CCDS12031.1 GZMM gene_id:3004|Hs108|chr19 (257 aa)
initn: 445 init1: 191 opt: 434 Z-score: 543.5 bits: 108.1 E(32554): 6e-24
Smith-Waterman score: 456; 37.4% identity (61.0% similar) in 254 aa overlap (6-242:5-252)
10 20 30 40 50 60
pF1KE3 MTRLTVLALLAGLLASSRAGSSPLLDIVGGRKARPRQFPFLASIQNQGRHFCGGALIHAR
: .::. :.. .::: .:.:::.. :.. :..::.: .: :.:::.:.: .
CCDS12 MEACVSSLLVLALGALSVGSSFGTQIIGGREVIPHSRPYMASLQRNGSHLCGGVLVHPK
10 20 30 40 50
70 80 90 100 110
pF1KE3 FVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSI-SSMSENGYDPQQNL-NDLML
.:.::: :. .: . .::: . : . :: : ..... : : : ::: :
CCDS12 WVLTAAHCL-AQRMAQLRLVLGLHTLD----SPGLTFHIKAAIQHPRYKPVPALENDLAL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 LQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPED
:::: ... . .. : :: . .: :::::..:::: ..:::::: : ... :
CCDS12 LQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTR
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 QCR----------PNNVCTGVLTRRGGICNGDGGTPLVC-EG--LAHGVASFSLGPCGR-
.: :. :: .. .. . :.::.: :::: .: ::. : ::: :
CCDS12 MCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSGGPLVCGKGRVLAR-VLSFSSRVCTDI
180 190 200 210 220 230
230 240 250
pF1KE3 -GPDFFTRVALFRDWIDGVLNNPGPGPA
: : :: . .:: :
CCDS12 FKPPVATAVAPYVSWIRKVTGRSA
240 250
>>CCDS12809.1 KLK4 gene_id:9622|Hs108|chr19 (254 aa)
initn: 328 init1: 131 opt: 415 Z-score: 519.9 bits: 103.7 E(32554): 1.2e-22
Smith-Waterman score: 415; 31.7% identity (61.3% similar) in 243 aa overlap (9-240:15-248)
10 20 30 40 50
pF1KE3 MTRLTVLALLAGLLASSRAGSSPLLDIVGGRKARPRQFPFLASIQNQGRHFCGG
:. :. .: .:: .:..:. :.. :. :.. ... ::.:
CCDS12 MATAGNPWGWFLGYLILGVAGSLVSGSCS--QIINGEDCSPHSQPWQAALVMENELFCSG
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 ALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSIS-SMSENGYDPQQNL
.:.: ..:..:: :::.. :. :: ..:. .. . : : :. . :.
CCDS12 VLVHPQWVLSAAHCFQNSY----TIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 NDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVT
:::::..::. .. .... . . : : ::. : :.::: ..::. . :::.
CCDS12 NDLMLIKLDESVSESDTIRSISIASQCPT--AGNSCLVSGWG-LLANGRMPTVLQCVNVS
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 VTPEDQC--------RPNNVCTGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGR-
:. :. : .:. :.: . ::::.: ::.:.: .:..::. .:::.
CCDS12 VVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLICNGYLQGLVSFGKAPCGQV
180 190 200 210 220 230
230 240 250
pF1KE3 G-PDFFTRVALFRDWIDGVLNNPGPGPA
: : .: . : .::.
CCDS12 GVPGVYTNLCKFTEWIEKTVQAS
240 250
>>CCDS82261.1 CFD gene_id:1675|Hs108|chr19 (260 aa)
initn: 463 init1: 306 opt: 395 Z-score: 494.8 bits: 99.1 E(32554): 3.1e-21
Smith-Waterman score: 452; 34.3% identity (60.6% similar) in 254 aa overlap (3-243:6-259)
10 20 30 40 50
pF1KE3 MTRLTVLALLAGLLASSRA---GSSPLLDIVGGRKARPRQFPFLASIQNQGRHFCGG
::.::.::.. . .: .. : :.:::.:. . :..::.: .: :.:::
CCDS82 MHSWERLAVLVLLGAAACGEEAWAWAAPPRGRILGGREAEAHARPYMASVQLNGAHLCGG
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 ALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLN
.:. ..:..:: :... : :.:::..: . : ..: . .. . .:. .
CCDS82 VLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDH
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 DLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTV
::.::::...:.: .: :: . : :: :.::::: .:: . : . :
CCDS82 DLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPV
130 140 150 160 170 180
180 190 200 210 220
pF1KE3 TPEDQCRPNNVCTGVLTRR--------GGICNGDGGTPLVCEGLAHGVASFSLGPCG--R
. : . :..:.: :.::.: :::: :. .::.. . :: .
CCDS82 LDRATCNRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVCGNRK
190 200 210 220 230 240
230 240 250
pF1KE3 GPDFFTRVALFRDWIDGVLNNPGPGPA
: ..:::: . :::.::
CCDS82 KPGIYTRVASYAAWIDSVLA
250 260
>>CCDS12046.1 CFD gene_id:1675|Hs108|chr19 (253 aa)
initn: 455 init1: 316 opt: 393 Z-score: 492.5 bits: 98.7 E(32554): 4.1e-21
Smith-Waterman score: 450; 34.4% identity (61.1% similar) in 247 aa overlap (7-243:7-252)
10 20 30 40 50 60
pF1KE3 MTRLTVLALLAGLLASSRAGSSPLLDIVGGRKARPRQFPFLASIQNQGRHFCGGALIHAR
::.:. ::... .. : :.:::.:. . :..::.: .: :.:::.:. .
CCDS12 MHSWERLAVLV-LLGAAACAAPPRGRILGGREAEAHARPYMASVQLNGAHLCGGVLVAEQ
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 FVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQ
.:..:: :... : :.:::..: . : ..: . .. . .:. .::.:::
CCDS12 WVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQ
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 LDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQC
:...:.: .: :: . : :: :.::::: .:: . : . : . :
CCDS12 LSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATC
120 130 140 150 160 170
190 200 210 220 230
pF1KE3 RPNNVCTGVLTRR--------GGICNGDGGTPLVCEGLAHGVASFSLGPCG--RGPDFFT
. :..:.: :.::.: :::: :. .::.. . :: . : ..:
CCDS12 NRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVCGNRKKPGIYT
180 190 200 210 220 230
240 250
pF1KE3 RVALFRDWIDGVLNNPGPGPA
::: . :::.::
CCDS12 RVASYAAWIDSVLA
240 250
>>CCDS9630.1 CMA1 gene_id:1215|Hs108|chr14 (247 aa)
initn: 363 init1: 167 opt: 389 Z-score: 487.7 bits: 97.7 E(32554): 7.6e-21
Smith-Waterman score: 389; 33.5% identity (59.4% similar) in 254 aa overlap (4-243:3-244)
10 20 30 40 50
pF1KE3 MTRLTVLALLAGLLASSRAGSSPLLDIVGGRKARPRQFPFLASIQ----NQGRHFCGGAL
: : :: :: : :: .. .:.:: . .:.. :..: .. : .:::: :
CCDS96 MLLLPLPLLLFLLCS-RAEAG---EIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFL
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 IHARFVMTAASCFQSQNPGVS-TVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLND
:. ::.::: : : : ::.:::... ..: .. :... . :. . .:
CCDS96 IRRNFVLTAAHC-----AGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHD
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 LMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSG--GRLSRFPRFVNVT
.:::.: ..:.:: .: ::.: : : : :.::::: :.: : . :..
CCDS96 IMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWG--RTGVLKPGSDTLQEVKLR
120 130 140 150 160
180 190 200 210 220
pF1KE3 VTPEDQCR-----PNNV--CTGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRGP
. . : .:. :.: . . .::.: ::.: :.:.:..:.. . .. :
CCDS96 LMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSD-AKPP
170 180 190 200 210 220
230 240 250
pF1KE3 DFFTRVALFRDWIDGVLNNPGPGPA
:::.. .: ::. .:
CCDS96 AVFTRISHYRPWINQILQAN
230 240
251 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:15:04 2016 done: Sun Nov 6 05:15:04 2016
Total Scan time: 1.900 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]