Result of FASTA (ccds) for
pFN21AE3079
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3079, 239 aa
1>>>pF1KE3079 239 - 239 aa - 239 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.2275+/-0.000704; mu= 15.8219+/- 0.043
mean_var=75.5270+/-15.261, 0's: 0 Z-trim(110.6): 21 B-trim: 0 in 0/51
Lambda= 0.147579
statistics sampled from 11704 (11725) to 11704 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.731), E-opt: 0.2 (0.36), width: 16
Scan time: 2.360
The best scores are: opt bits E(32554)
CCDS374.1 AK2 gene_id:204|Hs108|chr1 ( 239) 1571 343.1 9.5e-95
CCDS81296.1 AK2 gene_id:204|Hs108|chr1 ( 232) 1527 333.7 6.1e-92
CCDS373.1 AK2 gene_id:204|Hs108|chr1 ( 232) 1514 331.0 4.2e-91
CCDS81294.1 AK2 gene_id:204|Hs108|chr1 ( 190) 1033 228.5 2.4e-60
CCDS81295.1 AK2 gene_id:204|Hs108|chr1 ( 133) 738 165.6 1.5e-41
CCDS6455.1 AK3 gene_id:50808|Hs108|chr9 ( 227) 580 132.1 3e-31
CCDS629.1 AK4 gene_id:205|Hs108|chr1 ( 223) 522 119.8 1.5e-27
CCDS56561.1 AK3 gene_id:50808|Hs108|chr9 ( 157) 386 90.7 6.1e-19
CCDS56562.1 AK3 gene_id:50808|Hs108|chr9 ( 187) 371 87.6 6.4e-18
CCDS81340.1 AK4 gene_id:205|Hs108|chr1 ( 171) 357 84.5 4.7e-17
CCDS6881.1 AK1 gene_id:203|Hs108|chr9 ( 194) 264 64.8 4.8e-11
CCDS83419.1 AK1 gene_id:203|Hs108|chr9 ( 210) 264 64.8 5.1e-11
>>CCDS374.1 AK2 gene_id:204|Hs108|chr1 (239 aa)
initn: 1571 init1: 1571 opt: 1571 Z-score: 1814.5 bits: 343.1 E(32554): 9.5e-95
Smith-Waterman score: 1571; 100.0% identity (100.0% similar) in 239 aa overlap (1-239:1-239)
10 20 30 40 50 60
pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
130 140 150 160 170 180
190 200 210 220 230
pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI
190 200 210 220 230
>>CCDS81296.1 AK2 gene_id:204|Hs108|chr1 (232 aa)
initn: 1527 init1: 1527 opt: 1527 Z-score: 1764.1 bits: 333.7 E(32554): 6.1e-92
Smith-Waterman score: 1527; 100.0% identity (100.0% similar) in 232 aa overlap (1-232:1-232)
10 20 30 40 50 60
pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
130 140 150 160 170 180
190 200 210 220 230
pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI
::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATC
190 200 210 220 230
>>CCDS373.1 AK2 gene_id:204|Hs108|chr1 (232 aa)
initn: 1514 init1: 1514 opt: 1514 Z-score: 1749.1 bits: 331.0 E(32554): 4.2e-91
Smith-Waterman score: 1514; 100.0% identity (100.0% similar) in 231 aa overlap (1-231:1-231)
10 20 30 40 50 60
pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
130 140 150 160 170 180
190 200 210 220 230
pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS37 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATS
190 200 210 220 230
>>CCDS81294.1 AK2 gene_id:204|Hs108|chr1 (190 aa)
initn: 1031 init1: 1031 opt: 1033 Z-score: 1196.8 bits: 228.5 E(32554): 2.4e-60
Smith-Waterman score: 1145; 81.8% identity (81.8% similar) in 231 aa overlap (1-231:1-189)
10 20 30 40 50 60
pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
:::::::::::::::::::::::::::::::
CCDS81 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQ-----------------------------
10 20 30
70 80 90 100 110 120
pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
:::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 -------------VSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
40 50 60 70
130 140 150 160 170 180
pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
80 90 100 110 120 130
190 200 210 220 230
pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI
:::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATS
140 150 160 170 180 190
>>CCDS81295.1 AK2 gene_id:204|Hs108|chr1 (133 aa)
initn: 738 init1: 738 opt: 738 Z-score: 859.5 bits: 165.6 E(32554): 1.5e-41
Smith-Waterman score: 738; 96.6% identity (98.3% similar) in 116 aa overlap (1-116:1-116)
10 20 30 40 50 60
pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS81 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
:::::::::::::::::::::::::::::::::::::::::::::::::: :. .:
CCDS81 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMADSPQEWPFL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
CCDS81 PRGVQPSKRAHER
130
>>CCDS6455.1 AK3 gene_id:50808|Hs108|chr9 (227 aa)
initn: 613 init1: 299 opt: 580 Z-score: 674.5 bits: 132.1 E(32554): 3e-31
Smith-Waterman score: 580; 43.8% identity (74.9% similar) in 203 aa overlap (16-218:8-204)
10 20 30 40 50 60
pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
.:::..: ::.:::: . :.. .: . ::..::.:: . :.:.
CCDS64 MGASARLLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGTEI
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
: :: .: :::. :.....: ..:.. : . ..::::::::. ::: :: :
CCDS64 GVLAKAFIDQGKLIPDDVMTRLALHELKN-LTQYSWLLDGFPRTLPQAEALD-----RAY
60 70 80 90 100
130 140 150 160 170 180
pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
..:.::....: .. .:.:.: ::: ::: :. :::::: ::.::::::.: ::.
CCDS64 QIDTVINLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKP
110 120 130 140 150 160
190 200 210 220 230
pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI
... ::.::. :: :..:::.:.:. ......: .
CCDS64 ETVIKRLKAYEDQTKPVLEYYQKKGVLETFSGTETNKIWPYVYAFLQTKVPQRSQKASVT
170 180 190 200 210 220
CCDS64 P
>>CCDS629.1 AK4 gene_id:205|Hs108|chr1 (223 aa)
initn: 518 init1: 251 opt: 522 Z-score: 607.9 bits: 119.8 E(32554): 1.5e-27
Smith-Waterman score: 522; 40.0% identity (69.8% similar) in 215 aa overlap (14-228:4-211)
10 20 30 40 50 60
pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
: .:::.:::::.:::: :.:.:: . ::..: .:: . ...:.
CCDS62 MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEV
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
:. : .. . :: :.....:. ..::. .. .::::::::. ::: :: . :
CCDS62 GEMAKQYIEKSLLVPDHVITRLMMSELENRRGQH-WLLDGFPRTLGQAEALDKICE----
60 70 80 90 100
130 140 150 160 170 180
pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
.: :: ..:: : :.. : ::: ::: :. .::::. ::.:::::... ::.
CCDS62 -VDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDFNPPHVHGIDDVTGEPLVQQEDDKP
110 120 130 140 150 160
190 200 210 220 230
pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI
.:. ::. :. . :.:: :..::. .....: . .. . . ::
CCDS62 EAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTET-NKIWPYVYTLFSNKITPIQSKEAY
170 180 190 200 210 220
>>CCDS56561.1 AK3 gene_id:50808|Hs108|chr9 (157 aa)
initn: 401 init1: 299 opt: 386 Z-score: 453.5 bits: 90.7 E(32554): 6.1e-19
Smith-Waterman score: 386; 46.1% identity (75.0% similar) in 128 aa overlap (91-218:12-134)
70 80 90 100 110 120
pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
: . ..::::::::. ::: :: :
CCDS56 MTRLALHELKNLTQYSWLLDGFPRTLPQAEALD-----RAY
10 20 30
130 140 150 160 170 180
pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
..:.::....: .. .:.:.: ::: ::: :. :::::: ::.::::::.: ::.
CCDS56 QIDTVINLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKP
40 50 60 70 80 90
190 200 210 220 230
pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI
... ::.::. :: :..:::.:.:. ......: .
CCDS56 ETVIKRLKAYEDQTKPVLEYYQKKGVLETFSGTETNKIWPYVYAFLQTKVPQRSQKASVT
100 110 120 130 140 150
CCDS56 P
>>CCDS56562.1 AK3 gene_id:50808|Hs108|chr9 (187 aa)
initn: 499 init1: 299 opt: 371 Z-score: 435.2 bits: 87.6 E(32554): 6.4e-18
Smith-Waterman score: 410; 36.5% identity (60.1% similar) in 203 aa overlap (16-218:8-164)
10 20 30 40 50 60
pF1KE3 MAPSVPAAEPEYPKGIRAVLLGPPGAGKGTQAPRLAENFCVCHLATGDMLRAMVASGSEL
.:::..: ::.:::: . :.. .: . ::..::.:: . :.
CCDS56 MGASARLLRAVIMGAPGSGKGTVSSRITTHFELKHLSSGDLLRDNMLRGT--
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 GKKLKATMDAGKLVSDEMVVELIEKNLETPLCKNGFLLDGFPRTVRQAEMLDDLMEKRKE
:::::. ::: :: :
CCDS56 ---------------------------------------GFPRTLPQAEALD-----RAY
60
130 140 150 160 170 180
pF1KE3 KLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHEEFNPPKEPMKDDITGEPLIRRSDDNE
..:.::....: .. .:.:.: ::: ::: :. :::::: ::.::::::.: ::.
CCDS56 QIDTVINLNVPFEVIKQRLTARWIHPASGRVYNIEFNPPKTVGIDDLTGEPLIQREDDKP
70 80 90 100 110 120
190 200 210 220 230
pF1KE3 KALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQTPDVVFASILAAFSKATCKDLVMFI
... ::.::. :: :..:::.:.:. ......: .
CCDS56 ETVIKRLKAYEDQTKPVLEYYQKKGVLETFSGTETNKIWPYVYAFLQTKVPQRSQKASVT
130 140 150 160 170 180
CCDS56 P
>>CCDS81340.1 AK4 gene_id:205|Hs108|chr1 (171 aa)
initn: 326 init1: 251 opt: 357 Z-score: 419.6 bits: 84.5 E(32554): 4.7e-17
Smith-Waterman score: 357; 37.8% identity (67.7% similar) in 164 aa overlap (65-228:3-159)
40 50 60 70 80 90
pF1KE3 LAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPLCKN
: .. . :: :.....:. ..::. ..
CCDS81 MAKQYIEKSLLVPDHVITRLMMSELENRRGQH
10 20 30
100 110 120 130 140 150
pF1KE3 GFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIRRITGRLIHPKSGRSYHE
.::::::::. ::: :: . : .: :: ..:: : :.. : ::: ::: :.
CCDS81 -WLLDGFPRTLGQAEALDKICE-----VDLVISLNIPFETLKDRLSRRWIHPPSGRVYNL
40 50 60 70 80
160 170 180 190 200 210
pF1KE3 EFNPPKEPMKDDITGEPLIRRSDDNEKALKIRLQAYHTQTTPLIEYYRKRGIHSAIDASQ
.::::. ::.:::::... ::. .:. ::. :. . :.:: :..::. .....
CCDS81 DFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTE
90 100 110 120 130 140
220 230
pF1KE3 TPDVVFASILAAFSKATCKDLVMFI
: . .. . . ::
CCDS81 T-NKIWPYVYTLFSNKITPIQSKEAY
150 160 170
239 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 05:16:50 2016 done: Sun Nov 6 05:16:50 2016
Total Scan time: 2.360 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]