Result of FASTA (omim) for
pFN21AE3068
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3068, 224 aa
1>>>pF1KE3068 224 - 224 aa - 224 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3959+/-0.00035; mu= 12.9481+/- 0.022
mean_var=68.1045+/-13.572, 0's: 0 Z-trim(114.1): 54 B-trim: 0 in 0/50
Lambda= 0.155413
statistics sampled from 23745 (23799) to 23745 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.279), width: 16
Scan time: 6.000
The best scores are: opt bits E(85289)
XP_006713028 (OMIM: 608619) PREDICTED: protein FAM ( 224) 1523 350.3 1.5e-96
XP_011531653 (OMIM: 608619) PREDICTED: protein FAM ( 224) 1523 350.3 1.5e-96
XP_005264919 (OMIM: 608619) PREDICTED: protein FAM ( 224) 1523 350.3 1.5e-96
NP_620160 (OMIM: 608619) protein FAM3D precursor [ ( 224) 1523 350.3 1.5e-96
XP_005264920 (OMIM: 608619) PREDICTED: protein FAM ( 223) 1506 346.5 2.1e-95
XP_005264921 (OMIM: 608619) PREDICTED: protein FAM ( 223) 1506 346.5 2.1e-95
XP_011531651 (OMIM: 608619) PREDICTED: protein FAM ( 230) 1501 345.4 4.7e-95
XP_011531650 (OMIM: 608619) PREDICTED: protein FAM ( 230) 1501 345.4 4.7e-95
XP_011531652 (OMIM: 608619) PREDICTED: protein FAM ( 229) 1484 341.6 6.6e-94
XP_011531655 (OMIM: 608619) PREDICTED: protein FAM ( 188) 1265 292.4 3.4e-79
XP_011531654 (OMIM: 608619) PREDICTED: protein FAM ( 188) 1265 292.4 3.4e-79
XP_011531656 (OMIM: 608619) PREDICTED: protein FAM ( 187) 1261 291.5 6.2e-79
XP_006713030 (OMIM: 608619) PREDICTED: protein FAM ( 187) 1261 291.5 6.2e-79
NP_068578 (OMIM: 300492) protein FAM3A isoform 1 p ( 230) 868 203.5 2.5e-52
NP_001269241 (OMIM: 300492) protein FAM3A isoform ( 230) 868 203.5 2.5e-52
NP_001164603 (OMIM: 300492) protein FAM3A isoform ( 230) 868 203.5 2.5e-52
XP_016885190 (OMIM: 300492) PREDICTED: protein FAM ( 189) 822 193.1 2.7e-49
XP_016885189 (OMIM: 300492) PREDICTED: protein FAM ( 189) 822 193.1 2.7e-49
XP_016885191 (OMIM: 300492) PREDICTED: protein FAM ( 189) 822 193.1 2.7e-49
NP_001164604 (OMIM: 300492) protein FAM3A isoform ( 192) 821 192.9 3.2e-49
XP_005274773 (OMIM: 300492) PREDICTED: protein FAM ( 244) 821 192.9 3.9e-49
NP_001269240 (OMIM: 300492) protein FAM3A isoform ( 244) 821 192.9 3.9e-49
XP_016885188 (OMIM: 300492) PREDICTED: protein FAM ( 197) 796 187.3 1.6e-47
XP_006724897 (OMIM: 300492) PREDICTED: protein FAM ( 197) 796 187.3 1.6e-47
XP_011529487 (OMIM: 300492) PREDICTED: protein FAM ( 197) 796 187.3 1.6e-47
XP_005274771 (OMIM: 300492) PREDICTED: protein FAM ( 251) 797 187.6 1.7e-47
XP_006724895 (OMIM: 300492) PREDICTED: protein FAM ( 238) 795 187.1 2.2e-47
XP_006724894 (OMIM: 300492) PREDICTED: protein FAM ( 252) 795 187.1 2.3e-47
NP_001035109 (OMIM: 608618) protein FAM3C precurso ( 227) 794 186.9 2.4e-47
XP_011514039 (OMIM: 608618) PREDICTED: protein FAM ( 227) 794 186.9 2.4e-47
XP_011514038 (OMIM: 608618) PREDICTED: protein FAM ( 227) 794 186.9 2.4e-47
NP_055703 (OMIM: 608618) protein FAM3C precursor [ ( 227) 794 186.9 2.4e-47
XP_005277936 (OMIM: 300492) PREDICTED: protein FAM ( 213) 467 113.5 2.7e-25
NP_001164605 (OMIM: 300492) protein FAM3A isoform ( 213) 467 113.5 2.7e-25
XP_006724896 (OMIM: 300492) PREDICTED: protein FAM ( 227) 467 113.5 2.9e-25
NP_478066 (OMIM: 608617) protein FAM3B isoform a p ( 235) 464 112.9 4.7e-25
XP_011527951 (OMIM: 608617) PREDICTED: protein FAM ( 249) 464 112.9 4.9e-25
NP_996847 (OMIM: 608617) protein FAM3B isoform b [ ( 187) 456 111.0 1.3e-24
XP_011527950 (OMIM: 608617) PREDICTED: protein FAM ( 311) 458 111.6 1.5e-24
XP_011540062 (OMIM: 253280,606822,613151,613157,61 ( 638) 210 56.2 1.5e-07
NP_001277058 (OMIM: 253280,606822,613151,613157,61 ( 638) 210 56.2 1.5e-07
XP_016857179 (OMIM: 253280,606822,613151,613157,61 ( 660) 210 56.2 1.6e-07
NP_060209 (OMIM: 253280,606822,613151,613157,61712 ( 660) 210 56.2 1.6e-07
XP_006710818 (OMIM: 253280,606822,613151,613157,61 ( 718) 210 56.2 1.7e-07
XP_005271067 (OMIM: 253280,606822,613151,613157,61 ( 718) 210 56.2 1.7e-07
XP_006710819 (OMIM: 253280,606822,613151,613157,61 ( 748) 210 56.2 1.7e-07
NP_001230695 (OMIM: 253280,606822,613151,613157,61 ( 748) 210 56.2 1.7e-07
NP_001280227 (OMIM: 608366) cell migration-inducin (1361) 181 49.8 2.6e-05
NP_061159 (OMIM: 608366) cell migration-inducing a (1361) 181 49.8 2.6e-05
NP_001280233 (OMIM: 608366) cell migration-inducin (1361) 181 49.8 2.6e-05
>>XP_006713028 (OMIM: 608619) PREDICTED: protein FAM3D i (224 aa)
initn: 1523 init1: 1523 opt: 1523 Z-score: 1854.4 bits: 350.3 E(85289): 1.5e-96
Smith-Waterman score: 1523; 100.0% identity (100.0% similar) in 224 aa overlap (1-224:1-224)
10 20 30 40 50 60
pF1KE3 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
130 140 150 160 170 180
190 200 210 220
pF1KE3 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
::::::::::::::::::::::::::::::::::::::::::::
XP_006 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
190 200 210 220
>>XP_011531653 (OMIM: 608619) PREDICTED: protein FAM3D i (224 aa)
initn: 1523 init1: 1523 opt: 1523 Z-score: 1854.4 bits: 350.3 E(85289): 1.5e-96
Smith-Waterman score: 1523; 100.0% identity (100.0% similar) in 224 aa overlap (1-224:1-224)
10 20 30 40 50 60
pF1KE3 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
130 140 150 160 170 180
190 200 210 220
pF1KE3 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
::::::::::::::::::::::::::::::::::::::::::::
XP_011 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
190 200 210 220
>>XP_005264919 (OMIM: 608619) PREDICTED: protein FAM3D i (224 aa)
initn: 1523 init1: 1523 opt: 1523 Z-score: 1854.4 bits: 350.3 E(85289): 1.5e-96
Smith-Waterman score: 1523; 100.0% identity (100.0% similar) in 224 aa overlap (1-224:1-224)
10 20 30 40 50 60
pF1KE3 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
130 140 150 160 170 180
190 200 210 220
pF1KE3 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
::::::::::::::::::::::::::::::::::::::::::::
XP_005 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
190 200 210 220
>>NP_620160 (OMIM: 608619) protein FAM3D precursor [Homo (224 aa)
initn: 1523 init1: 1523 opt: 1523 Z-score: 1854.4 bits: 350.3 E(85289): 1.5e-96
Smith-Waterman score: 1523; 100.0% identity (100.0% similar) in 224 aa overlap (1-224:1-224)
10 20 30 40 50 60
pF1KE3 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKP
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_620 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
130 140 150 160 170 180
190 200 210 220
pF1KE3 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
::::::::::::::::::::::::::::::::::::::::::::
NP_620 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
190 200 210 220
>>XP_005264920 (OMIM: 608619) PREDICTED: protein FAM3D i (223 aa)
initn: 1259 init1: 1259 opt: 1506 Z-score: 1833.8 bits: 346.5 E(85289): 2.1e-95
Smith-Waterman score: 1506; 99.6% identity (99.6% similar) in 224 aa overlap (1-224:1-223)
10 20 30 40 50 60
pF1KE3 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKP
::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
XP_005 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLA-SPTKEIQVKKYKCGLIKP
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
120 130 140 150 160 170
190 200 210 220
pF1KE3 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
::::::::::::::::::::::::::::::::::::::::::::
XP_005 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
180 190 200 210 220
>>XP_005264921 (OMIM: 608619) PREDICTED: protein FAM3D i (223 aa)
initn: 1259 init1: 1259 opt: 1506 Z-score: 1833.8 bits: 346.5 E(85289): 2.1e-95
Smith-Waterman score: 1506; 99.6% identity (99.6% similar) in 224 aa overlap (1-224:1-223)
10 20 30 40 50 60
pF1KE3 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKP
::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::::
XP_005 MRVSGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLA-SPTKEIQVKKYKCGLIKP
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFD
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWV
120 130 140 150 160 170
190 200 210 220
pF1KE3 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
::::::::::::::::::::::::::::::::::::::::::::
XP_005 FIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
180 190 200 210 220
>>XP_011531651 (OMIM: 608619) PREDICTED: protein FAM3D i (230 aa)
initn: 1500 init1: 1500 opt: 1501 Z-score: 1827.5 bits: 345.4 E(85289): 4.7e-95
Smith-Waterman score: 1501; 97.4% identity (97.4% similar) in 230 aa overlap (1-224:1-230)
10 20 30 40 50
pF1KE3 MRVS------GVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYK
:::: ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRVSASPCSAGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 CGLIKPCPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CGLIKPCPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 GQKAFDMYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQKAFDMYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLG
130 140 150 160 170 180
180 190 200 210 220
pF1KE3 FRDSWVFIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FRDSWVFIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
190 200 210 220 230
>>XP_011531650 (OMIM: 608619) PREDICTED: protein FAM3D i (230 aa)
initn: 1500 init1: 1500 opt: 1501 Z-score: 1827.5 bits: 345.4 E(85289): 4.7e-95
Smith-Waterman score: 1501; 97.4% identity (97.4% similar) in 230 aa overlap (1-224:1-230)
10 20 30 40 50
pF1KE3 MRVS------GVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYK
:::: ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MRVSASPCSAGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYK
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 CGLIKPCPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CGLIKPCPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVL
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 GQKAFDMYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQKAFDMYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLG
130 140 150 160 170 180
180 190 200 210 220
pF1KE3 FRDSWVFIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FRDSWVFIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
190 200 210 220 230
>>XP_011531652 (OMIM: 608619) PREDICTED: protein FAM3D i (229 aa)
initn: 1259 init1: 1259 opt: 1484 Z-score: 1807.0 bits: 341.6 E(85289): 6.6e-94
Smith-Waterman score: 1484; 97.0% identity (97.0% similar) in 230 aa overlap (1-224:1-229)
10 20 30 40 50
pF1KE3 MRVS------GVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYK
:::: ::::::::::::::::::::::::::::::::::::: ::::::::::::
XP_011 MRVSASPCSAGVLRLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLA-SPTKEIQVKKYK
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 CGLIKPCPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CGLIKPCPANYFAFKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVL
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 GQKAFDMYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GQKAFDMYSGDVMHLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLG
120 130 140 150 160 170
180 190 200 210 220
pF1KE3 FRDSWVFIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FRDSWVFIGAKDLRGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
180 190 200 210 220
>>XP_011531655 (OMIM: 608619) PREDICTED: protein FAM3D i (188 aa)
initn: 1264 init1: 1264 opt: 1265 Z-score: 1542.9 bits: 292.4 E(85289): 3.4e-79
Smith-Waterman score: 1265; 98.9% identity (98.9% similar) in 187 aa overlap (38-224:2-188)
10 20 30 40 50 60
pF1KE3 RLLALIFAIVTTWMFIRSYMSFSMKTIRLPRWLAASPTKEIQVKKYKCGLIKPCPANYFA
: :::::::::::::::::::::::::::
XP_011 MRVSAASPTKEIQVKKYKCGLIKPCPANYFA
10 20 30
70 80 90 100 110 120
pF1KE3 FKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFDMYSGDVM
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FKICSGAANVVGPTMCFEDRMIMSPVKNNVGRGLNIALVNGTTGAVLGQKAFDMYSGDVM
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE3 HLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWVFIGAKDL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 HLVKFLKEIPGGALVLVASYDDPGTKMNDESRKLFSDLGSSYAKQLGFRDSWVFIGAKDL
100 110 120 130 140 150
190 200 210 220
pF1KE3 RGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
:::::::::::::::::::::::::::::::::::::
XP_011 RGKSPFEQFLKNSPDTNKYEGWPELLEMEGCMPPKPF
160 170 180
224 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 02:21:11 2016 done: Sun Nov 6 02:21:12 2016
Total Scan time: 6.000 Total Display time: 0.010
Function used was FASTA [36.3.4 Apr, 2011]