Result of FASTA (omim) for
pFN21AE3063
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3063, 219 aa
1>>>pF1KE3063 219 - 219 aa - 219 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0654+/-0.00036; mu= 15.8859+/- 0.023
mean_var=82.8214+/-16.501, 0's: 0 Z-trim(116.4): 441 B-trim: 0 in 0/52
Lambda= 0.140930
statistics sampled from 26988 (27507) to 26988 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.697), E-opt: 0.2 (0.323), width: 16
Scan time: 5.020
The best scores are: opt bits E(85289)
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 1461 306.3 2.6e-83
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 1157 244.5 1e-64
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 1157 244.5 1e-64
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 1131 239.2 4.1e-63
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 1131 239.2 4.1e-63
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 1104 233.7 1.9e-61
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 1104 233.7 1.9e-61
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 682 147.9 1.2e-35
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 672 145.8 4.8e-35
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 658 143.0 3.6e-34
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 652 141.8 7.9e-34
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 635 138.3 8.8e-33
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 630 137.3 1.8e-32
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 607 132.6 4.5e-31
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 578 126.7 2.7e-29
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 566 124.4 1.7e-28
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 527 116.4 4.2e-26
XP_016873867 (OMIM: 612565) PREDICTED: ras-related ( 237) 519 114.8 1.2e-25
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 517 114.4 1.6e-25
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 510 112.9 4.1e-25
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 508 112.5 5.1e-25
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 508 112.5 5.5e-25
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 508 112.5 5.7e-25
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 506 112.1 7.1e-25
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 500 110.9 1.7e-24
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 499 110.6 1.8e-24
NP_002860 (OMIM: 179513) ras-related protein Rab-6 ( 208) 492 109.2 5e-24
NP_057661 (OMIM: 615852) ras-related protein Rab-6 ( 208) 490 108.8 6.7e-24
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 489 108.6 7.6e-24
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 489 108.6 7.6e-24
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 489 108.6 7.6e-24
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 489 108.6 7.6e-24
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 489 108.7 7.9e-24
NP_942599 (OMIM: 179513) ras-related protein Rab-6 ( 208) 487 108.2 1e-23
XP_011519339 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 490 109.2 1.2e-23
XP_011519340 (OMIM: 614178) PREDICTED: EF-hand cal ( 493) 490 109.2 1.2e-23
NP_067075 (OMIM: 602207,614222) ras-related protei ( 206) 485 107.8 1.3e-23
NP_001138430 (OMIM: 614178) EF-hand calcium-bindin ( 731) 490 109.4 1.6e-23
XP_011519336 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 490 109.4 1.6e-23
XP_011519338 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 490 109.4 1.6e-23
XP_006719084 (OMIM: 614178) PREDICTED: EF-hand cal ( 732) 490 109.4 1.6e-23
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 480 106.8 2.8e-23
NP_004153 (OMIM: 179512) ras-related protein Rab-5 ( 215) 479 106.6 3.2e-23
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 478 106.4 3.7e-23
NP_958842 (OMIM: 604037) ras-related protein Rab-5 ( 216) 469 104.6 1.3e-22
XP_011523393 (OMIM: 604037) PREDICTED: ras-related ( 216) 469 104.6 1.3e-22
XP_011523392 (OMIM: 604037) PREDICTED: ras-related ( 216) 469 104.6 1.3e-22
NP_004574 (OMIM: 604037) ras-related protein Rab-5 ( 216) 469 104.6 1.3e-22
NP_001238968 (OMIM: 604037) ras-related protein Ra ( 249) 469 104.6 1.5e-22
XP_011520750 (OMIM: 605455) PREDICTED: ras-related ( 231) 466 104.0 2.1e-22
>>NP_004274 (OMIM: 604350) ras-related protein Rab-3D [H (219 aa)
initn: 1461 init1: 1461 opt: 1461 Z-score: 1616.8 bits: 306.3 E(85289): 2.6e-83
Smith-Waterman score: 1461; 100.0% identity (100.0% similar) in 219 aa overlap (1-219:1-219)
10 20 30 40 50 60
pF1KE3 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_004 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
130 140 150 160 170 180
190 200 210
pF1KE3 DVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC
:::::::::::::::::::::::::::::::::::::::
NP_004 DVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC
190 200 210
>>NP_002857 (OMIM: 179490) ras-related protein Rab-3A [H (220 aa)
initn: 1175 init1: 1111 opt: 1157 Z-score: 1282.7 bits: 244.5 E(85289): 1e-64
Smith-Waterman score: 1157; 77.3% identity (92.7% similar) in 220 aa overlap (1-219:1-220)
10 20 30 40 50 60
pF1KE3 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
:::: :.. : ....:::::::::.:.:::::::::::::::::::::::::::::::::
NP_002 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
:::.::.:::::::::::::::::::::::::::::::.:::::.:.::: :::::.:::
NP_002 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
::::::::::.:::::::.:::::: .: ::.::: :::::::::::.::::::.:::::
NP_002 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
130 140 150 160 170 180
190 200 210
pF1KE3 DVICEKMNESLEPSSSSGSNGK-GPAVGDAPAPQPSSCSC
:::::::.:::. .. . ...: :: ..: .: ..:.:
NP_002 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
190 200 210 220
>>XP_011526466 (OMIM: 179490) PREDICTED: ras-related pro (220 aa)
initn: 1175 init1: 1111 opt: 1157 Z-score: 1282.7 bits: 244.5 E(85289): 1e-64
Smith-Waterman score: 1157; 77.3% identity (92.7% similar) in 220 aa overlap (1-219:1-220)
10 20 30 40 50 60
pF1KE3 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
:::: :.. : ....:::::::::.:.:::::::::::::::::::::::::::::::::
XP_011 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
:::.::.:::::::::::::::::::::::::::::::.:::::.:.::: :::::.:::
XP_011 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
::::::::::.:::::::.:::::: .: ::.::: :::::::::::.::::::.:::::
XP_011 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
130 140 150 160 170 180
190 200 210
pF1KE3 DVICEKMNESLEPSSSSGSNGK-GPAVGDAPAPQPSSCSC
:::::::.:::. .. . ...: :: ..: .: ..:.:
XP_011 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
190 200 210 220
>>NP_002858 (OMIM: 179510) ras-related protein Rab-3B [H (219 aa)
initn: 1131 init1: 1131 opt: 1131 Z-score: 1254.1 bits: 239.2 E(85289): 4.1e-63
Smith-Waterman score: 1131; 75.8% identity (92.7% similar) in 219 aa overlap (1-219:1-219)
10 20 30 40 50 60
pF1KE3 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
:::. : ..: .::.:::::::::::.::::::::::::::::::.::::::::::::::
NP_002 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
:::::::.::.:::::::::::::::::::::::::::.:::::.:.::: :::::::::
NP_002 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
::::::::::::::::::.:.:::::.: :. ::..:::.::::::::::.:.:.:::::
NP_002 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
130 140 150 160 170 180
190 200 210
pF1KE3 DVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC
:.::.::..::. . : ...:. ..:.: ..:::
NP_002 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
190 200 210
>>XP_016857447 (OMIM: 179510) PREDICTED: ras-related pro (219 aa)
initn: 1131 init1: 1131 opt: 1131 Z-score: 1254.1 bits: 239.2 E(85289): 4.1e-63
Smith-Waterman score: 1131; 75.8% identity (92.7% similar) in 219 aa overlap (1-219:1-219)
10 20 30 40 50 60
pF1KE3 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
:::. : ..: .::.:::::::::::.::::::::::::::::::.::::::::::::::
XP_016 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
:::::::.::.:::::::::::::::::::::::::::.:::::.:.::: :::::::::
XP_016 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
::::::::::::::::::.:.:::::.: :. ::..:::.::::::::::.:.:.:::::
XP_016 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV
130 140 150 160 170 180
190 200 210
pF1KE3 DVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC
:.::.::..::. . : ...:. ..:.: ..:::
XP_016 DAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC
190 200 210
>>NP_001304844 (OMIM: 612829) ras-related protein Rab-3C (225 aa)
initn: 1068 init1: 1068 opt: 1104 Z-score: 1224.3 bits: 233.7 E(85289): 1.9e-61
Smith-Waterman score: 1104; 73.5% identity (90.9% similar) in 219 aa overlap (1-219:7-225)
10 20 30 40 50
pF1KE3 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVST
:::: :.. : .:..:::::::::::.::::::::::::::::::::: :::::
NP_001 MELYGKMASAQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVST
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 VGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQ
::::::::::....::::::::::::::::::::::::::::::.:::::.:.::: :::
NP_001 VGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQ
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 DWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQ
::.:::::::::::::::::::::.:::::. .: :..:...:::::::.:::.::::::
NP_001 DWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQ
130 140 150 160 170 180
180 190 200 210
pF1KE3 VFERLVDVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC
.::::::.::.::.:::: . . . .. . ..: : .:.:
NP_001 TFERLVDIICDKMSESLETDPAITAAKQNTRLKETPPPPQPNCAC
190 200 210 220
>>NP_612462 (OMIM: 612829) ras-related protein Rab-3C is (227 aa)
initn: 1068 init1: 1068 opt: 1104 Z-score: 1224.3 bits: 233.7 E(85289): 1.9e-61
Smith-Waterman score: 1104; 73.5% identity (90.9% similar) in 219 aa overlap (1-219:9-227)
10 20 30 40 50
pF1KE3 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFV
:::: :.. : .:..:::::::::::.::::::::::::::::::::: :::
NP_612 MRHEAPMQMASAQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFV
10 20 30 40 50 60
60 70 80 90 100 110
pF1KE3 STVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAA
::::::::::::....::::::::::::::::::::::::::::::.:::::.:.::: :
NP_612 STVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNA
70 80 90 100 110 120
120 130 140 150 160 170
pF1KE3 VQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINV
::::.:::::::::::::::::::::.:::::. .: :..:...:::::::.:::.::::
NP_612 VQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINV
130 140 150 160 170 180
180 190 200 210
pF1KE3 KQVFERLVDVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC
::.::::::.::.::.:::: . . . .. . ..: : .:.:
NP_612 KQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPPPPQPNCAC
190 200 210 220
>>NP_005361 (OMIM: 165040) ras-related protein Rab-8A [H (207 aa)
initn: 680 init1: 680 opt: 682 Z-score: 761.1 bits: 147.9 E(85289): 1.2e-35
Smith-Waterman score: 682; 50.2% identity (78.8% similar) in 203 aa overlap (17-219:3-204)
10 20 30 40 50 60
pF1KE3 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
...::.:::::::.:.:::: :::...:.:. .:.::.:::::
NP_005 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFK
10 20 30 40
70 80 90 100 110 120
pF1KE3 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
..:. :::::::::::::::.:::::::::::::..:.:::.:..:: ...: .:
NP_005 IRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
. .. ... ...:::::..:.: : : :..:: : :..:.:.::: ::::...: :.
NP_005 EEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA
110 120 130 140 150 160
190 200 210
pF1KE3 DVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC
: ::...:: .: .::: .: . . : :
NP_005 RDIKAKMDKKLEGNSPQGSN-QGVKITPDQQKRSSFFRCVLL
170 180 190 200
>>NP_057614 (OMIM: 613532) ras-related protein Rab-8B [H (207 aa)
initn: 643 init1: 623 opt: 672 Z-score: 750.1 bits: 145.8 E(85289): 4.8e-35
Smith-Waterman score: 672; 50.8% identity (84.9% similar) in 185 aa overlap (17-201:3-187)
10 20 30 40 50 60
pF1KE3 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
...::.:::::::.:.:::: .:::...:.:. .:.::.:::::
NP_057 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFK
10 20 30 40
70 80 90 100 110 120
pF1KE3 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
..:. :.:::::::::::::.:::::::::::::..:.:::.:..:: ...: .:
NP_057 IRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
. .. .... ...:::::..:.: : : :..:: : :..:.:.::: . ::...: :.
NP_057 EEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLA
110 120 130 140 150 160
190 200 210
pF1KE3 DVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC
: :.:.... :.:.:..:
NP_057 RDIMTKLNRKMNDSNSAGAGGPVKITENRSKKTSFFRCSLL
170 180 190 200
>>XP_011526322 (OMIM: 165040) PREDICTED: ras-related pro (215 aa)
initn: 665 init1: 645 opt: 658 Z-score: 734.5 bits: 143.0 E(85289): 3.6e-34
Smith-Waterman score: 658; 50.0% identity (81.2% similar) in 192 aa overlap (17-208:3-194)
10 20 30 40 50 60
pF1KE3 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
...::.:::::::.:.:::: :::...:.:. .:.::.:::::
XP_011 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFK
10 20 30 40
70 80 90 100 110 120
pF1KE3 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI
..:. :::::::::::::::.:::::::::::::..:.:::.:..:: ...: .:
XP_011 IRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNI
50 60 70 80 90 100
130 140 150 160 170 180
pF1KE3 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV
. .. ... ...:::::..:.: : : :..:: : :..:.:.::: ::::...: :.
XP_011 EEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA
110 120 130 140 150 160
190 200 210
pF1KE3 DVICEKMNESLEPSSSSGSNGKGPAVGDAPAPQPSSCSC
: ::...: ... . . : .:.
XP_011 RDIKAKMDKKLGQKDNMVCKDREPWLGEKLPRSLGQGQGWCLITAGSSS
170 180 190 200 210
219 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 06:03:42 2016 done: Sun Nov 6 06:03:43 2016
Total Scan time: 5.020 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]