Result of FASTA (omim) for
pFN21AE3062
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3062, 217 aa
1>>>pF1KE3062 217 - 217 aa - 217 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.0211+/-0.000392; mu= 15.5344+/- 0.025
mean_var=78.7513+/-15.892, 0's: 0 Z-trim(114.6): 417 B-trim: 549 in 1/53
Lambda= 0.144526
statistics sampled from 24022 (24530) to 24022 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.676), E-opt: 0.2 (0.288), width: 16
Scan time: 5.900
The best scores are: opt bits E(85289)
NP_741995 (OMIM: 300774) ras-related protein Rab-3 ( 213) 1144 247.8 1e-65
NP_002856 (OMIM: 179509) ras-related protein Rab-2 ( 212) 603 135.0 9e-32
NP_116235 (OMIM: 607466) ras-related protein Rab-2 ( 216) 600 134.4 1.4e-31
NP_057406 (OMIM: 612673) ras-related protein Rab-1 ( 215) 581 130.4 2.2e-30
NP_057614 (OMIM: 613532) ras-related protein Rab-8 ( 207) 562 126.4 3.3e-29
XP_011526322 (OMIM: 165040) PREDICTED: ras-related ( 215) 548 123.5 2.6e-28
NP_005361 (OMIM: 165040) ras-related protein Rab-8 ( 207) 547 123.3 2.9e-28
NP_002861 (OMIM: 602672) ras-related protein Rab-1 ( 203) 533 120.4 2.2e-27
NP_004569 (OMIM: 179511) ras-related protein Rab-4 ( 218) 518 117.3 2e-26
NP_004152 (OMIM: 179508) ras-related protein Rab-1 ( 205) 509 115.4 7e-26
NP_057238 (OMIM: 612945) ras-related protein Rab-4 ( 213) 509 115.4 7.2e-26
NP_004654 (OMIM: 605570) ras-related protein Rab-1 ( 216) 506 114.8 1.1e-25
NP_001272990 (OMIM: 605693) ras-related protein Ra ( 203) 505 114.6 1.2e-25
NP_055303 (OMIM: 605693) ras-related protein Rab-3 ( 203) 505 114.6 1.2e-25
NP_001272988 (OMIM: 605693) ras-related protein Ra ( 203) 505 114.6 1.2e-25
NP_001272989 (OMIM: 605693) ras-related protein Ra ( 203) 505 114.6 1.2e-25
NP_004209 (OMIM: 604198) ras-related protein Rab-1 ( 218) 503 114.2 1.7e-25
NP_002857 (OMIM: 179490) ras-related protein Rab-3 ( 220) 498 113.1 3.6e-25
XP_011526466 (OMIM: 179490) PREDICTED: ras-related ( 220) 498 113.1 3.6e-25
NP_055168 (OMIM: 605455) ras-related protein Rab-2 ( 256) 492 111.9 9.6e-25
NP_112243 (OMIM: 612565) ras-related protein Rab-1 ( 201) 486 110.6 1.9e-24
NP_001229573 (OMIM: 179509) ras-related protein Ra ( 188) 483 109.9 2.8e-24
NP_001294982 (OMIM: 605455) ras-related protein Ra ( 190) 480 109.3 4.4e-24
NP_057215 (OMIM: 612672) ras-related protein Rab-1 ( 200) 477 108.7 7e-24
NP_783865 (OMIM: 609956) ras-related protein Rab-3 ( 216) 471 107.5 1.8e-23
NP_112586 (OMIM: 605950,615222) ras-related protei ( 229) 469 107.1 2.4e-23
XP_011530601 (OMIM: 605950,615222) PREDICTED: ras- ( 277) 469 107.2 2.8e-23
NP_001317400 (OMIM: 609956) ras-related protein Ra ( 196) 462 105.6 6e-23
NP_001006639 (OMIM: 609956) ras-related protein Ra ( 223) 462 105.6 6.6e-23
NP_001157461 (OMIM: 609956) ras-related protein Ra ( 228) 462 105.6 6.7e-23
NP_001156852 (OMIM: 607466) ras-related protein Ra ( 170) 454 103.8 1.7e-22
NP_004274 (OMIM: 604350) ras-related protein Rab-3 ( 219) 455 104.2 1.8e-22
NP_001304844 (OMIM: 612829) ras-related protein Ra ( 225) 454 104.0 2.1e-22
NP_612462 (OMIM: 612829) ras-related protein Rab-3 ( 227) 454 104.0 2.1e-22
NP_001020471 (OMIM: 616448) ras-related protein Ra ( 244) 453 103.8 2.6e-22
NP_006852 (OMIM: 604199) ras-related protein Rab-3 ( 201) 444 101.8 8.3e-22
XP_016857447 (OMIM: 179510) PREDICTED: ras-related ( 219) 438 100.6 2.1e-21
NP_002858 (OMIM: 179510) ras-related protein Rab-3 ( 219) 438 100.6 2.1e-21
NP_004785 (OMIM: 300333) ras-related protein Rab-3 ( 237) 438 100.6 2.2e-21
NP_065120 (OMIM: 612942) ras-related protein Rab-2 ( 213) 435 100.0 3.2e-21
NP_899059 (OMIM: 603868,607624) ras-related protei ( 221) 431 99.2 5.8e-21
XP_005254633 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 431 99.2 5.8e-21
NP_899057 (OMIM: 603868,607624) ras-related protei ( 221) 431 99.2 5.8e-21
XP_011520156 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 431 99.2 5.8e-21
XP_011520158 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 431 99.2 5.8e-21
XP_011520157 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 431 99.2 5.8e-21
XP_011520154 (OMIM: 603868,607624) PREDICTED: ras- ( 221) 431 99.2 5.8e-21
NP_899058 (OMIM: 603868,607624) ras-related protei ( 221) 431 99.2 5.8e-21
NP_004571 (OMIM: 603868,607624) ras-related protei ( 221) 431 99.2 5.8e-21
XP_011520750 (OMIM: 605455) PREDICTED: ras-related ( 231) 420 96.9 2.9e-20
>>NP_741995 (OMIM: 300774) ras-related protein Rab-39B [ (213 aa)
initn: 1156 init1: 963 opt: 1144 Z-score: 1301.0 bits: 247.8 E(85289): 1e-65
Smith-Waterman score: 1144; 77.0% identity (94.0% similar) in 217 aa overlap (1-217:1-213)
10 20 30 40 50 60
pF1KE3 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGK
::.::.::::::::::::::::::..:::.::: . . ::::::::::::.::::::
NP_741 MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRF----AQVSDPTVGVDFFSRLVEIEPGK
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 RIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRI
:::::.::::::::::::::.::::::::.:.:::::::::..:..::::.:..:::..:
NP_741 RIKLQIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQI
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 VFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIK
::.:::::::: .::::::.:::::.: :::::::::.:: :::..:: ::::::::.:
NP_741 VFVLVGHKCDLDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDIYELVK
120 130 140 150 160 170
190 200 210
pF1KE3 KGEICIQDGWEGVKSGFVPNTVHSSEEAVKPRKECFC
.::: ::.::::::::::::.::::::.:: ...:.:
NP_741 RGEITIQEGWEGVKSGFVPNVVHSSEEVVKSERRCLC
180 190 200 210
>>NP_002856 (OMIM: 179509) ras-related protein Rab-2A is (212 aa)
initn: 513 init1: 261 opt: 603 Z-score: 691.4 bits: 135.0 E(85289): 9e-32
Smith-Waterman score: 603; 49.0% identity (78.6% similar) in 192 aa overlap (5-196:3-188)
10 20 30 40 50 60
pF1KE3 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGK
. : :. :.:::. ::::::: .::. :: .:. : :.::.: .:.. :. ::
NP_002 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRF----QPVHDLTIGVEFGARMITID-GK
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 RIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRI
.::::.::::::: ::::::::::...:..::.::: : .:.:. :::.:... . .
NP_002 QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNS-NM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 VFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIK
:..:.:.: :: :.:.: .::.: .. . :. ..::::: :.::::.: ...::: :.
NP_002 VIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQ
120 130 140 150 160 170
190 200 210
pF1KE3 KGEICIQDGWEGVKSGFVPNTVHSSEEAVKPRKECFC
.: . :.. .:.: :
NP_002 EGVFDINNEANGIKIGPQHAATNATHAGNQGGQQAGGGCC
180 190 200 210
>>NP_116235 (OMIM: 607466) ras-related protein Rab-2B is (216 aa)
initn: 510 init1: 264 opt: 600 Z-score: 687.9 bits: 134.4 E(85289): 1.4e-31
Smith-Waterman score: 600; 48.4% identity (79.7% similar) in 192 aa overlap (5-196:3-188)
10 20 30 40 50 60
pF1KE3 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGK
. : :. :.:::. ::::::: .::. :: .:. : :.::.: .:...:. ::
NP_116 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRF----QPVHDLTIGVEFGARMVNID-GK
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 RIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRI
.::::.::::::: ::::::::::...:..::.::: :..:.:. .:::.:... . .
NP_116 QIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSS-NM
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 VFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIK
:..:.:.: :: :.:.: :::.: .. . :. ..::::: : ::::.: ...::. :.
NP_116 VIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQ
120 130 140 150 160 170
190 200 210
pF1KE3 KGEICIQDGWEGVKSGFVPNTVHSSEEAVKPRKECFC
.: . ... .:.: :
NP_116 QGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC
180 190 200 210
>>NP_057406 (OMIM: 612673) ras-related protein Rab-14 [H (215 aa)
initn: 558 init1: 244 opt: 581 Z-score: 666.5 bits: 130.4 E(85289): 2.2e-30
Smith-Waterman score: 581; 42.0% identity (73.1% similar) in 212 aa overlap (7-217:10-215)
10 20 30 40 50
pF1KE3 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIE
: :. :.::: ::::::::.::. .: : :.::.: .:..:.
NP_057 MATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKF----MADCPHTIGVEFGTRIIEVS
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 PGKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQP
:..::::.::::::::::..::::::...:...:.::: : ...:...:: .:. ..:
NP_057 -GQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNP
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 FRIVFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYE
:..:.:.: :: .::.:: :::.... . :. ..:.::: . :::..: .. ::.
NP_057 -NTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQ
120 130 140 150 160 170
180 190 200 210
pF1KE3 LIKKGEICIQDGWEGVK-SGFVPNTVHSSEEAVKPRKECFC
:. : . .. . ::. . .:. . . : :. : :
NP_057 NIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC
180 190 200 210
>>NP_057614 (OMIM: 613532) ras-related protein Rab-8B [H (207 aa)
initn: 498 init1: 246 opt: 562 Z-score: 645.3 bits: 126.4 E(85289): 3.3e-29
Smith-Waterman score: 562; 45.9% identity (79.6% similar) in 181 aa overlap (1-181:1-175)
10 20 30 40 50 60
pF1KE3 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGK
: . : :.:..:::: :::.::: ::.. : . . :.:.:: : .:.. ::
NP_057 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAF----NTTFISTIGIDFKIRTIELD-GK
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 RIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRI
.::::.::::::::::.:: .:::...: .::.::::..::...:.:... . ... .
NP_057 KIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASS-DV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 VFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIK
...:.:::. ..:::..:..:::. : :.:..:::::...::::.: :.:::. ..
NP_057 ERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLN
120 130 140 150 160 170
190 200 210
pF1KE3 KGEICIQDGWEGVKSGFVPNTVHSSEEAVKPRKECFC
.
NP_057 RKMNDSNSAGAGGPVKITENRSKKTSFFRCSLL
180 190 200
>>XP_011526322 (OMIM: 165040) PREDICTED: ras-related pro (215 aa)
initn: 495 init1: 247 opt: 548 Z-score: 629.3 bits: 123.5 E(85289): 2.6e-28
Smith-Waterman score: 548; 43.3% identity (73.6% similar) in 201 aa overlap (1-194:1-195)
10 20 30 40 50 60
pF1KE3 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGK
: . : :.:..:::: :::.:.: ::.. : . . :.:.:: : .:.. ::
XP_011 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAF----NSTFISTIGIDFKIRTIELD-GK
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 RIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRI
:::::.::::::::::.:: .:::...: .::.::::..::.....:... . ... .
XP_011 RIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 VFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIK
...:.:::. ..:::..:..:::. : :.:..::::: :::..: :.::: .
XP_011 EKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMD
120 130 140 150 160 170
190 200 210
pF1KE3 K--GE----ICI-QDGWEGVKSGFVPNTVHSSEEAVKPRKECFC
: :. .: .. : : :
XP_011 KKLGQKDNMVCKDREPWLGEKLPRSLGQGQGWCLITAGSSS
180 190 200 210
>>NP_005361 (OMIM: 165040) ras-related protein Rab-8A [H (207 aa)
initn: 495 init1: 247 opt: 547 Z-score: 628.4 bits: 123.3 E(85289): 2.9e-28
Smith-Waterman score: 547; 44.9% identity (75.5% similar) in 196 aa overlap (1-194:1-190)
10 20 30 40 50 60
pF1KE3 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGK
: . : :.:..:::: :::.:.: ::.. : . . :.:.:: : .:.. ::
NP_005 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAF----NSTFISTIGIDFKIRTIELD-GK
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 RIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRI
:::::.::::::::::.:: .:::...: .::.::::..::.....:... . ... .
NP_005 RIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DV
60 70 80 90 100 110
130 140 150 160 170
pF1KE3 VFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIY-ELI
...:.:::. ..:::..:..:::. : :.:..::::: :::..: :.::: ..
NP_005 EKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMD
120 130 140 150 160 170
180 190 200 210
pF1KE3 KKGE-ICIQDGWEGVKSGFVPNTVHSSEEAVKPRKECFC
:: : : . .:::
NP_005 KKLEGNSPQGSNQGVKITPDQQKRSSFFRCVLL
180 190 200
>>NP_002861 (OMIM: 602672) ras-related protein Rab-13 is (203 aa)
initn: 487 init1: 242 opt: 533 Z-score: 612.8 bits: 120.4 E(85289): 2.2e-27
Smith-Waterman score: 533; 45.1% identity (77.5% similar) in 182 aa overlap (1-182:1-174)
10 20 30 40 50 60
pF1KE3 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIEPGK
: . . :.:..:::: :::.::. ::.. : . :.:.:: : ..:: ::
NP_002 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYIS----TIGIDFKIRTVDIE-GK
10 20 30 40 50
70 80 90 100 110 120
pF1KE3 RIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQPFRI
.::::.:::::::::..:: .:::...: .::.:::...:::....:.. : .. .
NP_002 KIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA-GV
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE3 VFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYELIK
::.:.:::. ..:.: .:.:.::. . :....:::::.. ::.:.:. :.::: :.:
NP_002 ERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI--LLK
120 130 140 150 160 170
190 200 210
pF1KE3 KGEICIQDGWEGVKSGFVPNTVHSSEEAVKPRKECFC
.:
NP_002 SGGRRSGNGNKPPSTDLKTCDKKNTNKCSLG
180 190 200
>>NP_004569 (OMIM: 179511) ras-related protein Rab-4A is (218 aa)
initn: 460 init1: 254 opt: 518 Z-score: 595.5 bits: 117.3 E(85289): 2e-26
Smith-Waterman score: 518; 39.3% identity (71.2% similar) in 219 aa overlap (1-217:6-218)
10 20 30 40 50
pF1KE3 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLE
: . . :...:::.. .:::::::.: . .: . . :.::.: :....
NP_004 MSQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKF----KDDSNHTIGVEFGSKIIN
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 IEPGKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYV
. :: .:::.:::::::::::.::::::...:..::.:::.:.... . .:: .:.: .
NP_004 V-GGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLA
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 QPFRIVFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDI
. ::..: :.: :: ..:.:: :: ... . . ..:::: . ::::.:. .: :
NP_004 SQ-NIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI
120 130 140 150 160 170
180 190 200 210
pF1KE3 YELIKKGEICIQDGWEGVKSGFVP-NTVHSSEEAVKPR-KECFC
. :..::. . :.. : . ..: ..: : .:: :
NP_004 LNKIESGELDPERMGSGIQYGDAALRQLRSPRRAQAPNAQECGC
180 190 200 210
>>NP_004152 (OMIM: 179508) ras-related protein Rab-1A is (205 aa)
initn: 484 init1: 241 opt: 509 Z-score: 585.7 bits: 115.4 E(85289): 7e-26
Smith-Waterman score: 509; 46.6% identity (75.0% similar) in 176 aa overlap (7-182:10-179)
10 20 30 40 50
pF1KE3 METIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPTVGVDFFSRLLEIE
: :.:..:::: ::::::: ::.. . . . :.:::: : .:..
NP_004 MSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTY----TESYISTIGVDFKIRTIELD
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 PGKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFEHVKDWLEEAKMYVQP
:: ::::.::::::::::.:: ::::.. : ..:.:.:...::..::.::.: :..
NP_004 -GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASE
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 FRIVFLLVGHKCDLASQRQVTREEAEKLSADCGMKYIETSAKDATNVEESFTILTRDIYE
. ::::.::::.... : :.... . :. ..:::::.:::::.:: .. .: .
NP_004 -NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKK
120 130 140 150 160 170
180 190 200 210
pF1KE3 LIKKGEICIQDGWEGVKSGFVPNTVHSSEEAVKPRKECFC
. :
NP_004 RMGPGATAGGAEKSNVKIQSTPVKQSGGGCC
180 190 200
217 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 04:53:28 2016 done: Sun Nov 6 04:53:29 2016
Total Scan time: 5.900 Total Display time: 0.000
Function used was FASTA [36.3.4 Apr, 2011]