Result of FASTA (omim) for
pFN21AE3056
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE3056, 212 aa
1>>>pF1KE3056 212 - 212 aa - 212 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.8988+/-0.000348; mu= 15.0769+/- 0.021
mean_var=58.5353+/-11.876, 0's: 0 Z-trim(114.7): 68 B-trim: 683 in 1/53
Lambda= 0.167635
statistics sampled from 24636 (24720) to 24636 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.692), E-opt: 0.2 (0.29), width: 16
Scan time: 5.790
The best scores are: opt bits E(85289)
NP_003542 (OMIM: 603575) nucleoside diphosphate ki ( 212) 1433 354.6 6.7e-98
XP_016865434 (OMIM: 603575) PREDICTED: nucleoside ( 278) 1238 307.6 1.3e-83
XP_005272156 (OMIM: 603575) PREDICTED: nucleoside ( 148) 956 239.2 2.6e-63
XP_006714779 (OMIM: 603575) PREDICTED: nucleoside ( 149) 956 239.2 2.7e-63
NP_932076 (OMIM: 613465) nucleoside diphosphate ki ( 340) 397 104.2 2.6e-22
XP_016856588 (OMIM: 613465) PREDICTED: nucleoside ( 367) 397 104.2 2.8e-22
NP_037462 (OMIM: 613465) nucleoside diphosphate ki ( 376) 397 104.2 2.8e-22
NP_001295355 (OMIM: 608294) nucleoside diphosphate ( 186) 353 93.4 2.5e-19
NP_001295357 (OMIM: 608294) nucleoside diphosphate ( 186) 353 93.4 2.5e-19
XP_016861003 (OMIM: 608294) PREDICTED: nucleoside ( 186) 353 93.4 2.5e-19
NP_001295356 (OMIM: 608294) nucleoside diphosphate ( 186) 353 93.4 2.5e-19
XP_016861002 (OMIM: 608294) PREDICTED: nucleoside ( 190) 353 93.4 2.6e-19
NP_005784 (OMIM: 608294) nucleoside diphosphate ki ( 194) 353 93.4 2.6e-19
NP_057700 (OMIM: 607421,610852) thioredoxin domain ( 588) 304 81.9 2.4e-15
NP_001295363 (OMIM: 608294) nucleoside diphosphate ( 141) 287 77.4 1.3e-14
XP_016856589 (OMIM: 613465) PREDICTED: nucleoside ( 252) 288 77.8 1.8e-14
XP_005245163 (OMIM: 613465) PREDICTED: nucleoside ( 252) 288 77.8 1.8e-14
NP_001018149 (OMIM: 156491) nucleoside diphosphate ( 152) 247 67.7 1.1e-11
NP_001018148 (OMIM: 156491) nucleoside diphosphate ( 152) 247 67.7 1.1e-11
NP_002503 (OMIM: 156491) nucleoside diphosphate ki ( 152) 247 67.7 1.1e-11
NP_001018147 (OMIM: 156491) nucleoside diphosphate ( 152) 247 67.7 1.1e-11
NP_005000 (OMIM: 601818) nucleoside diphosphate ki ( 187) 229 63.4 2.7e-10
XP_016861007 (OMIM: 608294) PREDICTED: nucleoside ( 111) 217 60.4 1.3e-09
NP_000260 (OMIM: 156490,256700) nucleoside diphosp ( 152) 215 60.0 2.4e-09
NP_937818 (OMIM: 156490,256700) nucleoside diphosp ( 177) 215 60.0 2.7e-09
XP_016861001 (OMIM: 608294) PREDICTED: nucleoside ( 264) 211 59.2 7.4e-09
XP_016861006 (OMIM: 608294) PREDICTED: nucleoside ( 114) 204 57.3 1.2e-08
NP_002504 (OMIM: 601817) nucleoside diphosphate ki ( 169) 195 55.2 7.5e-08
NP_001273364 (OMIM: 601818) nucleoside diphosphate ( 173) 172 49.6 3.6e-06
NP_001273368 (OMIM: 601818) nucleoside diphosphate ( 117) 170 49.0 3.6e-06
NP_001273367 (OMIM: 601818) nucleoside diphosphate ( 117) 170 49.0 3.6e-06
NP_001273365 (OMIM: 601818) nucleoside diphosphate ( 117) 170 49.0 3.6e-06
NP_001273369 (OMIM: 601818) nucleoside diphosphate ( 117) 170 49.0 3.6e-06
NP_001185611 (OMIM: 156491) nucleoside diphosphate ( 82) 162 47.0 1e-05
XP_016876448 (OMIM: 615364) PREDICTED: adenylate k ( 657) 159 46.8 9.5e-05
XP_016876446 (OMIM: 615364) PREDICTED: adenylate k ( 697) 159 46.8 0.0001
XP_016876445 (OMIM: 615364) PREDICTED: adenylate k ( 700) 159 46.8 0.0001
NP_689540 (OMIM: 615364) adenylate kinase 7 [Homo ( 723) 159 46.9 0.0001
XP_005255389 (OMIM: 601817) PREDICTED: nucleoside ( 165) 147 43.6 0.00023
>>NP_003542 (OMIM: 603575) nucleoside diphosphate kinase (212 aa)
initn: 1433 init1: 1433 opt: 1433 Z-score: 1878.7 bits: 354.6 E(85289): 6.7e-98
Smith-Waterman score: 1433; 100.0% identity (100.0% similar) in 212 aa overlap (1-212:1-212)
10 20 30 40 50 60
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 KYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELCKQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 DLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELCKQK
130 140 150 160 170 180
190 200 210
pF1KE3 PADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
::::::::::::::::::::::::::::::::
NP_003 PADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
190 200 210
>>XP_016865434 (OMIM: 603575) PREDICTED: nucleoside diph (278 aa)
initn: 1238 init1: 1238 opt: 1238 Z-score: 1622.0 bits: 307.6 E(85289): 1.3e-83
Smith-Waterman score: 1238; 99.5% identity (100.0% similar) in 187 aa overlap (1-187:1-187)
10 20 30 40 50 60
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELCKQK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELCKQK
130 140 150 160 170 180
190 200 210
pF1KE3 PADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
:::::.:
XP_016 PADPLFWYMCCRREHWTLRSILLVCMSGIRMSLPHCADYCSFVEGFEIESTNQSSNFVLF
190 200 210 220 230 240
>>XP_005272156 (OMIM: 603575) PREDICTED: nucleoside diph (148 aa)
initn: 956 init1: 956 opt: 956 Z-score: 1257.5 bits: 239.2 E(85289): 2.6e-63
Smith-Waterman score: 956; 100.0% identity (100.0% similar) in 145 aa overlap (1-145:1-145)
10 20 30 40 50 60
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELCKQK
:::::::::::::::::::::::::
XP_005 DLRNALHGSNDFAAAEREIRFMFPEEKL
130 140
>>XP_006714779 (OMIM: 603575) PREDICTED: nucleoside diph (149 aa)
initn: 956 init1: 956 opt: 956 Z-score: 1257.4 bits: 239.2 E(85289): 2.7e-63
Smith-Waterman score: 956; 100.0% identity (100.0% similar) in 145 aa overlap (1-145:1-145)
10 20 30 40 50 60
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIVQRRKLRLSPEQCSNFYVE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE3 KYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTD
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE3 DLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELCKQK
:::::::::::::::::::::::::
XP_006 DLRNALHGSNDFAAAEREIRFMFPEDLAS
130 140
>>NP_932076 (OMIM: 613465) nucleoside diphosphate kinase (340 aa)
initn: 418 init1: 397 opt: 397 Z-score: 521.5 bits: 104.2 E(85289): 2.6e-22
Smith-Waterman score: 397; 44.7% identity (75.0% similar) in 132 aa overlap (13-144:56-187)
10 20 30 40
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIV
:::::.:::: ..: :: .:: ..::::.
NP_932 IGNKVNVFSRQLVLIDYGDQYTARQLGSRKEKTLALIKPDAISKAGEIIEIINKAGFTIT
30 40 50 60 70 80
50 60 70 80 90 100
pF1KE3 QRRKLRLSPEQCSNFYVEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNS
. . . :: .. .:.:.. .. :: .: ....::..:: . : :: : .:::: ::
NP_932 KLKMMMLSRKEALDFHVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLGPANS
90 100 110 120 130 140
110 120 130 140 150 160
pF1KE3 LVAKETHPDSLRAIYGTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLN
::. .:.::..::: .::: :: ..::.: ::....::
NP_932 GVARTDASESIRALFGTDGIRNAAHGPDSFASAAREMELFFPSSGGCGPANTAKFTNCTC
150 160 170 180 190 200
170 180 190 200 210
pF1KE3 LHIMPTLLEGLTELCKQKPADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
NP_932 CIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMVTE
210 220 230 240 250 260
>--
initn: 159 init1: 137 opt: 173 Z-score: 228.7 bits: 50.0 E(85289): 5.3e-06
Smith-Waterman score: 173; 27.2% identity (58.8% similar) in 136 aa overlap (11-143:200-335)
10 20 30
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKEE--EIQDIILRSG
... : :.:: :.. .: : .:
NP_932 HGPDSFASAAREMELFFPSSGGCGPANTAKFTNCTCCIVKPHAVSEGLLGKILMAIRDAG
170 180 190 200 210 220
40 50 60 70 80 90
pF1KE3 FTIVQRRKLRLSPEQCSNFY-VEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELL
: : . . .. . .:: : : . .... : ::: ::: . ...: . . :.
NP_932 FEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMVTEMYSGPCVAMEIQQNNATKTFREFC
230 240 250 260 270 280
100 110 120 130 140 150
pF1KE3 GPNNSLVAKETHPDSLRAIYGTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAA
:: . .:.. .: .::::.: ..::.: .. . :....:
NP_932 GPADPEIARHLRPGTLRAIFGKTKIQNAVHCTDLPEDGLLEVQYFFKILDN
290 300 310 320 330 340
160 170 180 190 200 210
pF1KE3 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
>>XP_016856588 (OMIM: 613465) PREDICTED: nucleoside diph (367 aa)
initn: 418 init1: 397 opt: 397 Z-score: 521.0 bits: 104.2 E(85289): 2.8e-22
Smith-Waterman score: 397; 44.7% identity (75.0% similar) in 132 aa overlap (13-144:92-223)
10 20 30 40
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIV
:::::.:::: ..: :: .:: ..::::.
XP_016 IGNKVNVFSRQLVLIDYGDQYTARQLGSRKEKTLALIKPDAISKAGEIIEIINKAGFTIT
70 80 90 100 110 120
50 60 70 80 90 100
pF1KE3 QRRKLRLSPEQCSNFYVEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNS
. . . :: .. .:.:.. .. :: .: ....::..:: . : :: : .:::: ::
XP_016 KLKMMMLSRKEALDFHVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLGPANS
130 140 150 160 170 180
110 120 130 140 150 160
pF1KE3 LVAKETHPDSLRAIYGTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLN
::. .:.::..::: .::: :: ..::.: ::....::
XP_016 GVARTDASESIRALFGTDGIRNAAHGPDSFASAAREMELFFPSSGGCGPANTAKFTNCTC
190 200 210 220 230 240
170 180 190 200 210
pF1KE3 LHIMPTLLEGLTELCKQKPADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
XP_016 CIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMVTE
250 260 270 280 290 300
>--
initn: 159 init1: 137 opt: 167 Z-score: 220.4 bits: 48.6 E(85289): 1.5e-05
Smith-Waterman score: 167; 28.5% identity (59.3% similar) in 123 aa overlap (11-130:236-358)
10 20 30
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKEE--EIQDIILRSG
... : :.:: :.. .: : .:
XP_016 HGPDSFASAAREMELFFPSSGGCGPANTAKFTNCTCCIVKPHAVSEGLLGKILMAIRDAG
210 220 230 240 250 260
40 50 60 70 80 90
pF1KE3 FTIVQRRKLRLSPEQCSNFY-VEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELL
: : . . .. . .:: : : . .... : ::: ::: . ...: . . :.
XP_016 FEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMVTEMYSGPCVAMEIQQNNATKTFREFC
270 280 290 300 310 320
100 110 120 130 140 150
pF1KE3 GPNNSLVAKETHPDSLRAIYGTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAA
:: . .:.. .: .::::.: ..::.: ..
XP_016 GPADPEIARHLRPGTLRAIFGKTKIQNAVHCTDLPEDGLLEA
330 340 350 360
160 170 180 190 200 210
pF1KE3 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
>>NP_037462 (OMIM: 613465) nucleoside diphosphate kinase (376 aa)
initn: 418 init1: 397 opt: 397 Z-score: 520.9 bits: 104.2 E(85289): 2.8e-22
Smith-Waterman score: 397; 44.7% identity (75.0% similar) in 132 aa overlap (13-144:92-223)
10 20 30 40
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKEEEIQDIILRSGFTIV
:::::.:::: ..: :: .:: ..::::.
NP_037 IGNKVNVFSRQLVLIDYGDQYTARQLGSRKEKTLALIKPDAISKAGEIIEIINKAGFTIT
70 80 90 100 110 120
50 60 70 80 90 100
pF1KE3 QRRKLRLSPEQCSNFYVEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNS
. . . :: .. .:.:.. .. :: .: ....::..:: . : :: : .:::: ::
NP_037 KLKMMMLSRKEALDFHVDHQSRPFFNELIQFITTGPIIAMEILRDDAICEWKRLLGPANS
130 140 150 160 170 180
110 120 130 140 150 160
pF1KE3 LVAKETHPDSLRAIYGTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLN
::. .:.::..::: .::: :: ..::.: ::....::
NP_037 GVARTDASESIRALFGTDGIRNAAHGPDSFASAAREMELFFPSSGGCGPANTAKFTNCTC
190 200 210 220 230 240
170 180 190 200 210
pF1KE3 LHIMPTLLEGLTELCKQKPADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
NP_037 CIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMVTE
250 260 270 280 290 300
>--
initn: 159 init1: 137 opt: 173 Z-score: 228.1 bits: 50.1 E(85289): 5.8e-06
Smith-Waterman score: 173; 27.2% identity (58.8% similar) in 136 aa overlap (11-143:236-371)
10 20 30
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKEE--EIQDIILRSG
... : :.:: :.. .: : .:
NP_037 HGPDSFASAAREMELFFPSSGGCGPANTAKFTNCTCCIVKPHAVSEGLLGKILMAIRDAG
210 220 230 240 250 260
40 50 60 70 80 90
pF1KE3 FTIVQRRKLRLSPEQCSNFY-VEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELL
: : . . .. . .:: : : . .... : ::: ::: . ...: . . :.
NP_037 FEISAMQMFNMDRVNVEEFYEVYKGVVTEYHDMVTEMYSGPCVAMEIQQNNATKTFREFC
270 280 290 300 310 320
100 110 120 130 140 150
pF1KE3 GPNNSLVAKETHPDSLRAIYGTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAA
:: . .:.. .: .::::.: ..::.: .. . :....:
NP_037 GPADPEIARHLRPGTLRAIFGKTKIQNAVHCTDLPEDGLLEVQYFFKILDN
330 340 350 360 370
160 170 180 190 200 210
pF1KE3 KDYLNLHIMPTLLEGLTELCKQKPADPLIWLADWLLKNNPNKPKLCHHPIVEEPY
>>NP_001295355 (OMIM: 608294) nucleoside diphosphate kin (186 aa)
initn: 347 init1: 311 opt: 353 Z-score: 467.9 bits: 93.4 E(85289): 2.5e-19
Smith-Waterman score: 353; 41.1% identity (69.5% similar) in 141 aa overlap (8-145:8-147)
10 20 30 40 50
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKE---EEIQDIILRSGFTIVQRRKLRLSPEQCSNF
:: .. :::.:::: : . : ... :: . : ::. :.: :.:. :
NP_001 MASILRSPQA-LQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRF
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 YVEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIY
: :. :..:. :. .:.:::. :.:::.. ::. : :.::. . :... :::.:. .
NP_001 YREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 GTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELC
: : ::. :::.. ..: ::: .::.
NP_001 GLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEGGVHYVAG
120 130 140 150 160 170
>>NP_001295357 (OMIM: 608294) nucleoside diphosphate kin (186 aa)
initn: 347 init1: 311 opt: 353 Z-score: 467.9 bits: 93.4 E(85289): 2.5e-19
Smith-Waterman score: 353; 41.1% identity (69.5% similar) in 141 aa overlap (8-145:8-147)
10 20 30 40 50
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKE---EEIQDIILRSGFTIVQRRKLRLSPEQCSNF
:: .. :::.:::: : . : ... :: . : ::. :.: :.:. :
NP_001 MASILRSPQA-LQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRF
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 YVEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIY
: :. :..:. :. .:.:::. :.:::.. ::. : :.::. . :... :::.:. .
NP_001 YREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 GTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELC
: : ::. :::.. ..: ::: .::.
NP_001 GLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEGGVHYVAG
120 130 140 150 160 170
>>XP_016861003 (OMIM: 608294) PREDICTED: nucleoside diph (186 aa)
initn: 347 init1: 311 opt: 353 Z-score: 467.9 bits: 93.4 E(85289): 2.5e-19
Smith-Waterman score: 353; 41.1% identity (69.5% similar) in 141 aa overlap (8-145:8-147)
10 20 30 40 50
pF1KE3 MEISMPPPQIYVEKTLAIIKPDIVDKE---EEIQDIILRSGFTIVQRRKLRLSPEQCSNF
:: .. :::.:::: : . : ... :: . : ::. :.: :.:. :
XP_016 MASILRSPQA-LQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRF
10 20 30 40 50
60 70 80 90 100 110
pF1KE3 YVEKYGKMFFPNLTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIY
: :. :..:. :. .:.:::. :.:::.. ::. : :.::. . :... :::.:. .
XP_016 YREHEGRFFYQRLVEFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSF
60 70 80 90 100 110
120 130 140 150 160 170
pF1KE3 GTDDLRNALHGSNDFAAAEREIRFMFPEVIVEPIPIGQAAKDYLNLHIMPTLLEGLTELC
: : ::. :::.. ..: ::: .::.
XP_016 GLTDTRNTTHGSDSVVSASREIAAFFPDFSEQRWYEEEEPQLRCGPVCYSPEGGVHYVAG
120 130 140 150 160 170
212 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sun Nov 6 17:07:16 2016 done: Sun Nov 6 17:07:17 2016
Total Scan time: 5.790 Total Display time: -0.010
Function used was FASTA [36.3.4 Apr, 2011]