FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3022, 136 aa
  1>>>pF1KE3022 136 - 136 aa - 136 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8348+/-0.000273; mu= 14.0559+/- 0.017
 mean_var=63.9473+/-12.675, 0's: 0 Z-trim(119.8): 1  B-trim: 0 in 0/57
 Lambda= 0.160385
 statistics sampled from 34199 (34200) to 34199 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.776), E-opt: 0.2 (0.401), width:  16
 Scan time:  4.880

The best scores are:                                      opt bits E(85289)
NP_937823 (OMIM: 609795) orexigenic neuropeptide Q ( 136)  955 228.6 2.5e-60


>>NP_937823 (OMIM: 609795) orexigenic neuropeptide QRFP   (136 aa)
 initn: 955 init1: 955 opt: 955  Z-score: 1204.1  bits: 228.6 E(85289): 2.5e-60
Smith-Waterman score: 955; 100.0% identity (100.0% similar) in 136 aa overlap (1-136:1-136)

               10        20        30        40        50        60
pF1KE3 MVRPYPLIYFLFLPLGACFPLLDRREPTDAMGGLGAGERWADLAMGPRPHSVWGSSRWLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 MVRPYPLIYFLFLPLGACFPLLDRREPTDAMGGLGAGERWADLAMGPRPHSVWGSSRWLR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 ASQPQALLVIARGLQTSGREHAGCRFRFGRQDEGSEATGFLPAAGEKTSGPLGNLAEELN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_937 ASQPQALLVIARGLQTSGREHAGCRFRFGRQDEGSEATGFLPAAGEKTSGPLGNLAEELN
               70        80        90       100       110       120

              130      
pF1KE3 GYSRKKGGFSFRFGRR
       ::::::::::::::::
NP_937 GYSRKKGGFSFRFGRR
              130      




136 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 15:40:10 2016 done: Sun Nov  6 15:40:11 2016
 Total Scan time:  4.880 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]